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Aliases for RPS21P3 Gene

Aliases for RPS21P3 Gene

  • Ribosomal Protein S21 Pseudogene 3 2 3
  • RPS21_2_494 3
  • AC098818.1 5

External Ids for RPS21P3 Gene

Previous GeneCards Identifiers for RPS21P3 Gene

  • GC04P079909
  • GC04P079690

Summaries for RPS21P3 Gene

GeneCards Summary for RPS21P3 Gene

RPS21P3 (Ribosomal Protein S21 Pseudogene 3) is a Pseudogene.

Additional gene information for RPS21P3 Gene

No data available for Entrez Gene Summary , CIViC summary , UniProtKB/Swiss-Prot , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , fRNAdb sequence ontologies and piRNA Summary for RPS21P3 Gene

Genomics for RPS21P3 Gene

GeneHancer (GH) Regulatory Elements for RPS21P3 Gene

Promoters and enhancers for RPS21P3 Gene
GeneHancer (GH) Identifier GH Type GH
Score
GH Sources Gene Association Score Total Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor
Binding Sites
Gene Targets
GH04I078767 Enhancer 1.1 Ensembl ENCODE dbSUPER 550.8 +0.6 582 2.6 ESRRA SAP130 JUN TEAD4 TAL1 ZBTB40 FOSL1 TCF12 NCOR1 FOS GC04P078769 RPS21P3 ENSG00000260278
GH04I078691 Enhancer 1.7 FANTOM5 Ensembl ENCODE dbSUPER 11.6 -75.3 -75344 4 HDGF PKNOX1 SMAD1 ARNT ZNF766 CBX5 E2F8 FOS REST ZNF592 BMP2K CNOT6L LINC00989 SERBP1P5 OR7E94P ENSG00000200998 RPS21P3 GC04P078707 HIGD1AP13
GH04I078621 Enhancer 1.7 FANTOM5 Ensembl ENCODE dbSUPER 11.4 -141.8 -141762 10.5 HDGF PKNOX1 FOXA2 SMAD1 ARNT YBX1 POLR2B ZNF766 E2F8 FOS BMP2K CNOT6L RPS21P3 LINC01094 LINC01088 ENSG00000200998 GC04M078633 ANXA3
GH04I078644 Enhancer 1.5 FANTOM5 Ensembl ENCODE dbSUPER 11.7 -122.6 -122595 2.7 HDGF ATF1 IRF4 ZNF143 KDM4B NCOA1 JUNB REST ZNF592 MAFF LINC01094 BMP2K RPS21P3 CNOT6L ENSG00000200998 GC04M078633
GH04I078704 Enhancer 1.3 Ensembl ENCODE dbSUPER 12 -63.1 -63103 2.3 FOXA2 ZNF493 ZFP64 ZNF121 ZNF213 ATF7 FOS ZNF202 SP3 ZC3H11A GC04P078707 CNOT6L BMP2K RPS21P3 ENSG00000200998 LINC01094 HIGD1AP13
- Elite GeneHancer and/or Elite GeneHancer-gene association Download GeneHancer data dump

GeneHancers around RPS21P3 on UCSC Golden Path with GeneCards custom track

Genomic Locations for RPS21P3 Gene

Genomic Locations for RPS21P3 Gene
chr4:78,768,449-78,768,812
(GRCh38/hg38)
Size:
364 bases
Orientation:
Plus strand
chr4:79,689,603-79,689,966
(GRCh37/hg19)

Genomic View for RPS21P3 Gene

Genes around RPS21P3 on UCSC Golden Path with GeneCards custom track

Cytogenetic band:
RPS21P3 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for RPS21P3 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

RefSeq DNA sequence for RPS21P3 Gene

Proteins for RPS21P3 Gene

Post-translational modifications for RPS21P3 Gene

No Post-translational modifications

No data available for DME Specific Peptides for RPS21P3 Gene

Domains & Families for RPS21P3 Gene

Graphical View of Domain Structure for InterPro Entry

No data available for Gene Families , Protein Domains , Suggested Antigen Peptide Sequences and UniProtKB/Swiss-Prot for RPS21P3 Gene

Function for RPS21P3 Gene

Animal Model Products

Clone Products

No data available for Molecular function , Enzyme Numbers (IUBMB) , Phenotypes From GWAS Catalog , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for RPS21P3 Gene

Localization for RPS21P3 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS , Subcellular locations from the Human Protein Atlas (HPA) and Gene Ontology (GO) - Cellular Components for RPS21P3 Gene

Pathways & Interactions for RPS21P3 Gene

SuperPathways for RPS21P3 Gene

No Data Available

Interacting Proteins for RPS21P3 Gene

Gene Ontology (GO) - Biological Process for RPS21P3 Gene

None

No data available for Pathways by source and SIGNOR curated interactions for RPS21P3 Gene

Drugs & Compounds for RPS21P3 Gene

No Compound Related Data Available

Transcripts for RPS21P3 Gene

mRNA/cDNA for RPS21P3 Gene

(1) Ensembl transcripts including schematic representations, and UCSC links where relevant :

Clone Products

Alternative Splicing Database (ASD) splice patterns (SP) for RPS21P3 Gene

No ASD Table

Relevant External Links for RPS21P3 Gene

GeneLoc Exon Structure for
RPS21P3
ECgene alternative splicing isoforms for
RPS21P3

Expression for RPS21P3 Gene

mRNA expression in normal human tissues from GTEx, Illumina, BioGPS, and CGAP SAGE for RPS21P3 Gene

mRNA differential expression in normal tissues according to GTEx for RPS21P3 Gene

This gene is overexpressed in Testis (x20.3), Brain - Hypothalamus (x5.0), and Brain - Spinal cord (cervical c-1) (x4.8).

NURSA nuclear receptor signaling pathways regulating expression of RPS21P3 Gene:

RPS21P3
genes like me logo Genes that share expression patterns with RPS21P3: view

No data available for mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners , mRNA Expression by UniProt/SwissProt , Evidence on tissue expression from TISSUES and Phenotype-based relationships between genes and organs from Gene ORGANizer for RPS21P3 Gene

Orthologs for RPS21P3 Gene

Evolution for RPS21P3 Gene

ENSEMBL:
Gene Tree for RPS21P3 (if available)
TreeFam:
Gene Tree for RPS21P3 (if available)

No data available for Orthologs for RPS21P3 Gene

Paralogs for RPS21P3 Gene

No data available for Paralogs for RPS21P3 Gene

Variants for RPS21P3 Gene

Additional Variant Information for RPS21P3 Gene

SNPedia medical, phenotypic, and genealogical associations of SNPs for
RPS21P3

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Sequence variations from dbSNP and Humsavar , Structural Variations from Database of Genomic Variants (DGV) and Variation tolerance for RPS21P3 Gene

Disorders for RPS21P3 Gene

No disorders were found for RPS21P3 Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot , Genatlas and External Links for RPS21P3 Gene

Publications for RPS21P3 Gene

  1. Comparative analysis of processed ribosomal protein pseudogenes in four mammalian genomes. (PMID: 19123937) Balasubramanian S … Gerstein M (Genome biology 2009) 2 3 58

Products for RPS21P3 Gene

Sources for RPS21P3 Gene

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