RPS20P35 Gene (Pseudogene)

Ribosomal Protein S20 Pseudogene 35

GC17P038856
GIFtS:
6
See more...

Aliases for RPS20P35 Gene

Aliases for RPS20P35 Gene

  • Ribosomal Protein S20 Pseudogene 35 2 3
  • RPS20_18_1544 3

External Ids for RPS20P35 Gene

Previous GeneCards Identifiers for RPS20P35 Gene

  • GC17U901139
  • GC17P037012

Summaries for RPS20P35 Gene

GeneCards Summary for RPS20P35 Gene

RPS20P35 (Ribosomal Protein S20 Pseudogene 35) is a Pseudogene.

Additional gene information for RPS20P35 Gene

No data available for Entrez Gene Summary , CIViC Summary , UniProtKB/Swiss-Prot Summary , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , Rfam classification and piRNA Summary for RPS20P35 Gene

Genomics for RPS20P35 Gene

GeneHancer (GH) Regulatory Elements Pubs

Download GeneHancer 2017 data
Promoters and enhancers for RPS20P35 Gene
GeneHancer (GH) Identifier GH Type GH
Score		 GH Sources Gene Association Score Total Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor
Binding Sites		 Gene Targets
GH17J038850 Promoter/Enhancer 2.5 EPDnew FANTOM5 Ensembl ENCODE CraniofacialAtlas 600.7 -1.8 -1835 5.5 BRCA1 ARHGAP35 SP1 HNRNPL CREB1 GATAD2A ATF7 PRDM10 REST ZNF629 SNORA21 RPL23 ENSG00000244086 RPS20P35 SNORA21B lnc-C17orf98-1 piR-33050 lnc-LASP1-3 CDK12 LOC105371762
- Elite GeneHancer and/or Elite GeneHancer-gene association Download GeneHancer data from 2017 publication | Request up-to-date GeneHancer data (full dataset)

GeneHancers around RPS20P35 on the GeneHancer Hub at the UCSC Golden Path

Genomic Locations for RPS20P35 Gene

Genomic Locations for RPS20P35 Gene
chr17:38,855,194-38,855,704
(GRCh38/hg38)
Size:
511 bases
Orientation:
Plus strand
chr17:37,011,447-37,011,957
(GRCh37/hg19)
Size:
511 bases
Orientation:
Plus strand

Genomic View for RPS20P35 Gene

Genes around RPS20P35 on UCSC Golden Path with GeneCards custom track

Cytogenetic band:
RPS20P35 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for RPS20P35 Gene
GeneLoc Logo Genomic Neighborhood • Exon Structure • Gene Density

RefSeq DNA sequence for RPS20P35 Gene

Proteins for RPS20P35 Gene

Products:

  1. Antibody
  2. Protein
  3. Assay

Post-translational modifications for RPS20P35 Gene

No Post-translational modifications

No data available for DME Specific Peptides for RPS20P35 Gene

Domains & Families for RPS20P35 Gene

No data available for Gene Families , Protein Domains , Suggested Antigen Peptide Sequences , Graphical View of Domain Structure and UniProtKB/Swiss-Prot for RPS20P35 Gene

Function for RPS20P35 Gene

Products:

  1. Animal Model
  2. CRISPR
  3. miRNA
  4. Inhibitory RNA
  5. Clone
  6. Cell Line

Animal Model Products

CRISPR Products

No data available for Molecular function , Enzyme Numbers (IUBMB) , Phenotypes From GWAS Catalog , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for RPS20P35 Gene

Localization for RPS20P35 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS , Subcellular locations from the Human Protein Atlas (HPA) and Gene Ontology (GO) - Cellular Components for RPS20P35 Gene

Pathways & Interactions for RPS20P35 Gene

PathCards logo

SuperPathways for RPS20P35 Gene

No Data Available

Gene Ontology (GO) - Biological Process for RPS20P35 Gene

None

No data available for Pathways by source , Interacting Proteins and SIGNOR curated interactions for RPS20P35 Gene

Drugs & Compounds for RPS20P35 Gene

Products:

  1. Drug
No Compound Related Data Available

Transcripts for RPS20P35 Gene

Products:

  1. CRISPR
  2. miRNA
  3. Inhibitory RNA
  4. Clone

CRISPR Products

Alternative Splicing Database (ASD) splice patterns (SP) for RPS20P35 Gene

No ASD Table

Relevant External Links for RPS20P35 Gene

GeneLoc Exon Structure for
RPS20P35

No data available for mRNA/cDNA for RPS20P35 Gene

Expression for RPS20P35 Gene

Products:

  1. Primer

mRNA expression in normal human tissues from GTEx, Illumina, BioGPS, and SAGE for RPS20P35 Gene

mRNA expression in normal human tissues for RPS20P35 Gene
mRNA expression by GTEx for RPS20P35 Gene

mRNA differential expression in normal tissues according to GTEx for RPS20P35 Gene

This gene is overexpressed in Testis (x14.6).
genes like me logo Genes that share expression patterns with RPS20P35: view

No data available for mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners , mRNA Expression by UniProt/SwissProt , Evidence on tissue expression from TISSUES and Phenotype-based relationships between genes and organs from Gene ORGANizer for RPS20P35 Gene

Orthologs for RPS20P35 Gene

No data available for Orthologs and Evolution for RPS20P35 Gene

Paralogs for RPS20P35 Gene

No data available for Paralogs for RPS20P35 Gene

Variants for RPS20P35 Gene

Additional Variant Information for RPS20P35 Gene

SNPedia medical, phenotypic, and genealogical associations of SNPs for
RPS20P35

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Sequence variations, with clinical significance, from ClinVar and Humsavar, with links to dbSNP , Additional dbSNP identifiers (rs#s) , Structural Variations from Database of Genomic Variants (DGV) and Variation tolerance for RPS20P35 Gene

Disorders for RPS20P35 Gene

No disorders were found for RPS20P35 Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot , Genatlas and External Links for RPS20P35 Gene

Publications for RPS20P35 Gene

  1. Comparative analysis of processed ribosomal protein pseudogenes in four mammalian genomes. (PMID: 19123937) Balasubramanian S … Gerstein M (Genome biology 2009) 2 3

ExternalLinks

View latest publications for RPS20P35 gene in Mastermind

Products for RPS20P35 Gene

Sources for RPS20P35 Gene