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Aliases for RPS20P31 Gene

Subcategory (RNA class) for RPS20P31 Gene

antisense

Aliases for RPS20P31 Gene

  • Ribosomal Protein S20 Pseudogene 31 2 3
  • RPS20_15_1287 3

External Ids for RPS20P31 Gene

ORGUL Members for RPS20P31 Gene

Previous GeneCards Identifiers for RPS20P31 Gene

  • GC12U901090
  • GC12P120686

Summaries for RPS20P31 Gene

GeneCards Summary for RPS20P31 Gene

RPS20P31 (Ribosomal Protein S20 Pseudogene 31) is a Pseudogene, and is affiliated with the antisense RNA class.

Additional gene information for RPS20P31 Gene

No data available for Entrez Gene Summary , CIViC summary , UniProtKB/Swiss-Prot , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , fRNAdb sequence ontologies and piRNA Summary for RPS20P31 Gene

Genomics for RPS20P31 Gene

GeneHancer (GH) Regulatory Elements for RPS20P31 Gene

Promoters and enhancers for RPS20P31 Gene
GeneHancer (GH) Identifier GH Type GH
Score
GH Sources Gene Association Score Total Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor
Binding Sites
Gene Targets
GH12I120239 Promoter/Enhancer 2.2 EPDnew FANTOM5 Ensembl ENCODE dbSUPER 0.8 +2.1 2070 19.3 PKNOX1 SMAD1 FOXA2 ARNT ZNF2 ZNF766 E2F8 FOS REST ZNF592 PXN SIRT4 RNU4-1 RNU4-2 RNU6-1088P PLA2G1B P2RX4 BICDL1 RNF10 RAB35
GH12I120261 Promoter/Enhancer 2.4 EPDnew FANTOM5 Ensembl ENCODE dbSUPER 0.4 +16.5 16469 5.2 PKNOX1 CLOCK ATF1 MLX ZFP64 ARID4B SIN3A BRCA1 GTF3C2 ZNF766 PXN SIRT4 RPLP0 MSI1 RAB35 RPS20P31
GH12I120223 Promoter/Enhancer 2.3 EPDnew FANTOM5 Ensembl ENCODE dbSUPER 0.4 -15.9 -15875 16 CLOCK MLX FEZF1 DMAP1 YY1 SLC30A9 ZNF213 ZNF143 ZNF263 SP3 PXN SIRT4 RPLP0 RNU4-1 RNU4-2 PXN-AS1 PLA2G1B GCN1 RAB35 MSI1
GH12I120259 Enhancer 0.9 Ensembl ENCODE dbSUPER 0.4 +12.4 12448 1 ZNF449 HLF SCRT2 HMBOX1 ZBTB33 PXN RPS20P31
GH12I120260 Enhancer 0.5 ENCODE dbSUPER 0.4 +13.3 13313 0.2 ZNF600 PXN RPS20P31
- Elite GeneHancer and/or Elite GeneHancer-gene association Download GeneHancer data dump

GeneHancers around RPS20P31 on UCSC Golden Path with GeneCards custom track

Genomic Locations for RPS20P31 Gene

Genomic Locations for RPS20P31 Gene
chr12:120,247,460-120,247,791
(GRCh38/hg38)
Size:
332 bases
Orientation:
Plus strand
chr12:120,685,263-120,685,594
(GRCh37/hg19)

Genomic View for RPS20P31 Gene

Genes around RPS20P31 on UCSC Golden Path with GeneCards custom track

Cytogenetic band:
RPS20P31 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for RPS20P31 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

RefSeq DNA sequence for RPS20P31 Gene

Proteins for RPS20P31 Gene

Post-translational modifications for RPS20P31 Gene

No Post-translational modifications

No data available for DME Specific Peptides for RPS20P31 Gene

Domains & Families for RPS20P31 Gene

Graphical View of Domain Structure for InterPro Entry

No data available for Gene Families , Protein Domains , Suggested Antigen Peptide Sequences and UniProtKB/Swiss-Prot for RPS20P31 Gene

Function for RPS20P31 Gene

Animal Model Products

Clone Products

No data available for Molecular function , Enzyme Numbers (IUBMB) , Phenotypes From GWAS Catalog , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for RPS20P31 Gene

Localization for RPS20P31 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS , Subcellular locations from the Human Protein Atlas (HPA) and Gene Ontology (GO) - Cellular Components for RPS20P31 Gene

Pathways & Interactions for RPS20P31 Gene

SuperPathways for RPS20P31 Gene

No Data Available

Interacting Proteins for RPS20P31 Gene

Gene Ontology (GO) - Biological Process for RPS20P31 Gene

None

No data available for Pathways by source and SIGNOR curated interactions for RPS20P31 Gene

Drugs & Compounds for RPS20P31 Gene

No Compound Related Data Available

Transcripts for RPS20P31 Gene

mRNA/cDNA for RPS20P31 Gene

(1) Ensembl transcripts including schematic representations, and UCSC links where relevant :

Clone Products

Alternative Splicing Database (ASD) splice patterns (SP) for RPS20P31 Gene

No ASD Table

Relevant External Links for RPS20P31 Gene

GeneLoc Exon Structure for
RPS20P31
ECgene alternative splicing isoforms for
RPS20P31

Expression for RPS20P31 Gene

mRNA expression in normal human tissues from GTEx, Illumina, BioGPS, and CGAP SAGE for RPS20P31 Gene

NURSA nuclear receptor signaling pathways regulating expression of RPS20P31 Gene:

RPS20P31
genes like me logo Genes that share expression patterns with RPS20P31: view

No data available for mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , mRNA differential expression in normal tissues , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners , mRNA Expression by UniProt/SwissProt , Evidence on tissue expression from TISSUES and Phenotype-based relationships between genes and organs from Gene ORGANizer for RPS20P31 Gene

Orthologs for RPS20P31 Gene

Evolution for RPS20P31 Gene

ENSEMBL:
Gene Tree for RPS20P31 (if available)
TreeFam:
Gene Tree for RPS20P31 (if available)

No data available for Orthologs for RPS20P31 Gene

Paralogs for RPS20P31 Gene

No data available for Paralogs for RPS20P31 Gene

Variants for RPS20P31 Gene

Additional Variant Information for RPS20P31 Gene

SNPedia medical, phenotypic, and genealogical associations of SNPs for
RPS20P31

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Sequence variations from dbSNP and Humsavar , Structural Variations from Database of Genomic Variants (DGV) and Variation tolerance for RPS20P31 Gene

Disorders for RPS20P31 Gene

No disorders were found for RPS20P31 Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot , Genatlas and External Links for RPS20P31 Gene

Publications for RPS20P31 Gene

  1. Comparative analysis of processed ribosomal protein pseudogenes in four mammalian genomes. (PMID: 19123937) Balasubramanian S … Gerstein M (Genome biology 2009) 2 3 58

Products for RPS20P31 Gene

Sources for RPS20P31 Gene

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