Aliases for RPS20P27 Gene

Aliases for RPS20P27 Gene

  • Ribosomal Protein S20 Pseudogene 27 2 3
  • RPS20_12_1158 3

External Ids for RPS20P27 Gene

Previous GeneCards Identifiers for RPS20P27 Gene

  • GC11U901254
  • GC11M077525

Summaries for RPS20P27 Gene

GeneCards Summary for RPS20P27 Gene

RPS20P27 (Ribosomal Protein S20 Pseudogene 27) is a Pseudogene.

Additional gene information for RPS20P27 Gene

No data available for Entrez Gene Summary , CIViC Summary , UniProtKB/Swiss-Prot Summary , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , Rfam classification and piRNA Summary for RPS20P27 Gene

Genomics for RPS20P27 Gene

GeneHancer (GH) Regulatory Elements for RPS20P27 Gene

Promoters and enhancers for RPS20P27 Gene
GeneHancer (GH) Identifier GH Type GH
Score
GH Sources Gene Association Score Total Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor
Binding Sites
Gene Targets
GH11J077814 Enhancer 0.2 Ensembl 500.7 +0.1 95 1 ENSG00000219529 RPS20P27 AAMDC lnc-INTS4-4 RSF1
GH11J077815 Enhancer 0.2 Ensembl 500.7 -0.7 -705 0.2 ENSG00000219529 RPS20P27 lnc-INTS4-4 RSF1
- Elite GeneHancer and/or Elite GeneHancer-gene association Download GeneHancer data from 2017 publication | Request up-to-date GeneHancer data (full dataset)

GeneHancers around RPS20P27 on UCSC Golden Path with GeneCards custom track

Genomic Locations for RPS20P27 Gene

Genomic Locations for RPS20P27 Gene
chr11:77,813,276-77,813,796
(GRCh38/hg38)
Size:
521 bases
Orientation:
Minus strand
chr11:77,524,322-77,524,842
(GRCh37/hg19)
Size:
521 bases
Orientation:
Minus strand

Genomic View for RPS20P27 Gene

Genes around RPS20P27 on UCSC Golden Path with GeneCards custom track

Cytogenetic band:
RPS20P27 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for RPS20P27 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

RefSeq DNA sequence for RPS20P27 Gene

Proteins for RPS20P27 Gene

Post-translational modifications for RPS20P27 Gene

No Post-translational modifications

No data available for DME Specific Peptides for RPS20P27 Gene

Domains & Families for RPS20P27 Gene

No data available for Gene Families , Protein Domains , Suggested Antigen Peptide Sequences , Graphical View of Domain Structure and UniProtKB/Swiss-Prot for RPS20P27 Gene

Function for RPS20P27 Gene

Animal Model Products

CRISPR Products

No data available for Molecular function , Enzyme Numbers (IUBMB) , Phenotypes From GWAS Catalog , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for RPS20P27 Gene

Localization for RPS20P27 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS , Subcellular locations from the Human Protein Atlas (HPA) and Gene Ontology (GO) - Cellular Components for RPS20P27 Gene

Pathways & Interactions for RPS20P27 Gene

PathCards logo

SuperPathways for RPS20P27 Gene

No Data Available
;

Gene Ontology (GO) - Biological Process for RPS20P27 Gene

None

No data available for Pathways by source , Interacting Proteins and SIGNOR curated interactions for RPS20P27 Gene

Drugs & Compounds for RPS20P27 Gene

No Compound Related Data Available

Transcripts for RPS20P27 Gene

mRNA/cDNA for RPS20P27 Gene

1 NCBI additional mRNA sequence :

Alternative Splicing Database (ASD) splice patterns (SP) for RPS20P27 Gene

No ASD Table

Relevant External Links for RPS20P27 Gene

GeneLoc Exon Structure for
RPS20P27

Expression for RPS20P27 Gene

mRNA expression in normal human tissues from GTEx, Illumina, BioGPS, and SAGE for RPS20P27 Gene

mRNA expression in normal human tissues for RPS20P27 Gene

Transcriptomic regulation report from SPP (The Signaling Pathways Project) for RPS20P27

SOURCE GeneReport for Unigene cluster for RPS20P27 Gene:

Hs.660751
genes like me logo Genes that share expression patterns with RPS20P27: view

No data available for mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , mRNA differential expression in normal tissues , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners , mRNA Expression by UniProt/SwissProt , Evidence on tissue expression from TISSUES and Phenotype-based relationships between genes and organs from Gene ORGANizer for RPS20P27 Gene

Orthologs for RPS20P27 Gene

No data available for Orthologs and Evolution for RPS20P27 Gene

Paralogs for RPS20P27 Gene

No data available for Paralogs for RPS20P27 Gene

Variants for RPS20P27 Gene

Additional Variant Information for RPS20P27 Gene

SNPedia medical, phenotypic, and genealogical associations of SNPs for
RPS20P27

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Sequence variations, with clinical significance, from ClinVar and Humsavar, with links to dbSNP , Additional dbSNP identifiers (rs#s) , Structural Variations from Database of Genomic Variants (DGV) and Variation tolerance for RPS20P27 Gene

Disorders for RPS20P27 Gene

Additional Disease Information for RPS20P27

No disorders were found for RPS20P27 Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot and Genatlas for RPS20P27 Gene

Publications for RPS20P27 Gene

  1. Comparative analysis of processed ribosomal protein pseudogenes in four mammalian genomes. (PMID: 19123937) Balasubramanian S … Gerstein M (Genome biology 2009) 2 3 54
  2. Generation and initial analysis of more than 15,000 full-length human and mouse cDNA sequences. (PMID: 12477932) Strausberg RL … Mammalian Gene Collection Program Team (Proceedings of the National Academy of Sciences of the United States of America 2002) 3 54

Products for RPS20P27 Gene

Sources for RPS20P27 Gene