Aliases for RPS20P2 Gene

Aliases for RPS20P2 Gene

  • Ribosomal Protein S20 Pseudogene 2 2 3 5

External Ids for RPS20P2 Gene

Previous GeneCards Identifiers for RPS20P2 Gene

  • GC16U990182
  • GC16P001320
  • GC16P001379
  • GC16P001378

Summaries for RPS20P2 Gene

GeneCards Summary for RPS20P2 Gene

RPS20P2 (Ribosomal Protein S20 Pseudogene 2) is a Pseudogene.

Additional gene information for RPS20P2 Gene

No data available for Entrez Gene Summary , CIViC Summary , UniProtKB/Swiss-Prot Summary , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , Rfam classification and piRNA Summary for RPS20P2 Gene

Genomics for RPS20P2 Gene

GeneHancer (GH) Regulatory Elements for RPS20P2 Gene

Promoters and enhancers for RPS20P2 Gene
GeneHancer (GH) Identifier GH Type GH
Score
GH Sources Gene Association Score Total Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor
Binding Sites
Gene Targets
GH16J001326 Enhancer 0.6 dbSUPER 500.7 -1.2 -1217 0.9 REST RFX1 POLR2G JUN AGO2 ZNF184 KLF16 TAF7 POLR2A GLIS2 RPS20P2 lnc-UBE2I-2 UBE2I BAIAP3 ENSG00000261505
GH16J001328 Enhancer 0.3 Ensembl 500.7 -0.1 -125 0.2 ZNF770 RPS20P2 lnc-UBE2I-2 BAIAP3 ENSG00000261505
GH16J001295 Promoter/Enhancer 1.7 Ensembl ENCODE dbSUPER 12 -30.2 -30205 6.4 FOXK2 ZNF217 CTCF NRF1 POLR2G NCOR1 GTF2E2 FOS ZNF639 ZIC2 ENSG00000260710 lnc-UBE2I-3 ENSG00000261505 BAIAP3 UBE2I RPS20P2 TPSD1 RHOT2 GNPTG TSR3
GH16J001271 Enhancer 1.4 Ensembl ENCODE CraniofacialAtlas 11.9 -56.7 -56699 1.9 ZSCAN5C ZNF300 RBAK ZNF639 ZNF354C ZNF10 ZIC2 ZBTB10 ZNF423 ZNF623 CRAMP1 WDR90 IFT140 ENSG00000260646 TELO2 WDR24 TSC2 ENSG00000261505 E4F1 ENSG00000261123
GH16J001363 Enhancer 1.1 Ensembl ENCODE dbSUPER 12.8 +35.3 35264 1 CTCF ZNF10 ZIC2 GABPA REST MYC RAD21 CTBP1 TRIM22 SMC3 BAIAP3 RPS20P2 CCDC154 TMEM204 IFT140 CRAMP1 ENSG00000226890 MAPK8IP3 GNPTG ENSG00000260425
- Elite GeneHancer and/or Elite GeneHancer-gene association Download GeneHancer data from 2017 publication | Request up-to-date GeneHancer data (full dataset)

GeneHancers around RPS20P2 on UCSC Golden Path with GeneCards custom track

Genomic Locations for RPS20P2 Gene

Genomic Locations for RPS20P2 Gene
chr16:1,328,626-1,329,809
(GRCh38/hg38)
Size:
1,184 bases
Orientation:
Plus strand
chr16:1,378,627-1,379,810
(GRCh37/hg19)
Size:
1,184 bases
Orientation:
Plus strand

Genomic View for RPS20P2 Gene

Genes around RPS20P2 on UCSC Golden Path with GeneCards custom track

Cytogenetic band:
RPS20P2 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for RPS20P2 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

RefSeq DNA sequence for RPS20P2 Gene

Proteins for RPS20P2 Gene

Post-translational modifications for RPS20P2 Gene

No Post-translational modifications

No data available for DME Specific Peptides for RPS20P2 Gene

Domains & Families for RPS20P2 Gene

No data available for Gene Families , Protein Domains , Suggested Antigen Peptide Sequences , Graphical View of Domain Structure and UniProtKB/Swiss-Prot for RPS20P2 Gene

Function for RPS20P2 Gene

Phenotypes From GWAS Catalog for RPS20P2 Gene

Animal Model Products

CRISPR Products

No data available for Molecular function , Enzyme Numbers (IUBMB) , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for RPS20P2 Gene

Localization for RPS20P2 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS , Subcellular locations from the Human Protein Atlas (HPA) and Gene Ontology (GO) - Cellular Components for RPS20P2 Gene

Pathways & Interactions for RPS20P2 Gene

PathCards logo

SuperPathways for RPS20P2 Gene

No Data Available
;

Gene Ontology (GO) - Biological Process for RPS20P2 Gene

None

No data available for Pathways by source , Interacting Proteins and SIGNOR curated interactions for RPS20P2 Gene

Drugs & Compounds for RPS20P2 Gene

No Compound Related Data Available

Transcripts for RPS20P2 Gene

mRNA/cDNA for RPS20P2 Gene

1 Ensembl transcripts including schematic representations, and UCSC links to gene/alias where relevant :

CRISPR Products

Alternative Splicing Database (ASD) splice patterns (SP) for RPS20P2 Gene

No ASD Table

Relevant External Links for RPS20P2 Gene

GeneLoc Exon Structure for
RPS20P2

Expression for RPS20P2 Gene

mRNA expression in normal human tissues from GTEx, Illumina, BioGPS, and SAGE for RPS20P2 Gene

genes like me logo Genes that share expression patterns with RPS20P2: view

No data available for mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , mRNA differential expression in normal tissues , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners , mRNA Expression by UniProt/SwissProt , Evidence on tissue expression from TISSUES and Phenotype-based relationships between genes and organs from Gene ORGANizer for RPS20P2 Gene

Orthologs for RPS20P2 Gene

Evolution for RPS20P2 Gene

ENSEMBL:
Gene Tree for RPS20P2 (if available)
TreeFam:
Gene Tree for RPS20P2 (if available)

No data available for Orthologs for RPS20P2 Gene

Paralogs for RPS20P2 Gene

No data available for Paralogs for RPS20P2 Gene

Variants for RPS20P2 Gene

Additional Variant Information for RPS20P2 Gene

SNPedia medical, phenotypic, and genealogical associations of SNPs for
RPS20P2

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Sequence variations, with clinical significance, from ClinVar and Humsavar, with links to dbSNP , Additional dbSNP identifiers (rs#s) , Structural Variations from Database of Genomic Variants (DGV) and Variation tolerance for RPS20P2 Gene

Disorders for RPS20P2 Gene

No disorders were found for RPS20P2 Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot , Genatlas and External Links for RPS20P2 Gene

Publications for RPS20P2 Gene

No publications were found for RPS20P2 Gene.

Products for RPS20P2 Gene

Sources for RPS20P2 Gene