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Aliases for RPS20P18 Gene

Aliases for RPS20P18 Gene

  • Ribosomal Protein S20 Pseudogene 18 2 3
  • RPS20_10_738 3
  • AL512430.2 5

External Ids for RPS20P18 Gene

Previous GeneCards Identifiers for RPS20P18 Gene

  • GC06U901643
  • GC06P111022

Summaries for RPS20P18 Gene

GeneCards Summary for RPS20P18 Gene

RPS20P18 (Ribosomal Protein S20 Pseudogene 18) is a Pseudogene.

Additional gene information for RPS20P18 Gene

No data available for Entrez Gene Summary , CIViC summary , UniProtKB/Swiss-Prot , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , fRNAdb sequence ontologies and piRNA Summary for RPS20P18 Gene

Genomics for RPS20P18 Gene

GeneHancer (GH) Regulatory Elements for RPS20P18 Gene

Promoters and enhancers for RPS20P18 Gene
GeneHancer (GH) Identifier GH Type GH
Score
GH Sources Gene Association Score Total Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor
Binding Sites
Gene Targets
GH06I110699 Enhancer 0.9 Ensembl ENCODE 550.8 +0.2 217 1.5 SREBF2 JUN ZIC2 RFX5 GTF3C2 GATA3 POLR3A POLR2A RCOR1 FOS GC06P110701 RPS20P18 REV3L RNU6-957P RPF2 CDK19 GTF3C6 AMD1 ENSG00000219150
GH06I110681 Enhancer 1.3 Ensembl ENCODE dbSUPER 0.4 -18.1 -18117 1.4 PKNOX1 FOXA2 MLX ARID4B FEZF1 IRF4 YY1 ARID2 ZNF207 ZNF143 AMD1 CDK19 GTF3C6 RNU6-957P RPF2 CNN2P9 RPS20P18 LOC100129155
GH06I110689 Enhancer 0.7 ENCODE dbSUPER 0.4 -10.4 -10403 1.5 CTCF NFIB HLF SCRT2 CREB1 RFX5 RPF2 RNU6-957P AMD1 CDK19 GTF3C6 RPS20P18 LOC100129155
GH06I110688 Enhancer 0.6 Ensembl dbSUPER 0.4 -11.5 -11539 0.6 CTCF ZNF341 SCRT2 RNU6-957P AMD1 RPF2 GTF3C6 RPS20P18 LOC100129155 CDK19
GH06I110664 Enhancer 0.8 Ensembl ENCODE dbSUPER 0.3 -35.2 -35248 1.6 SRF HMBOX1 ELF1 LOC100129155 RPS20P18 CDK19
- Elite GeneHancer and/or Elite GeneHancer-gene association Download GeneHancer data dump

GeneHancers around RPS20P18 on UCSC Golden Path with GeneCards custom track

Genomic Locations for RPS20P18 Gene

Genomic Locations for RPS20P18 Gene
chr6:110,700,440-110,700,923
(GRCh38/hg38)
Size:
484 bases
Orientation:
Plus strand
chr6:111,021,643-111,022,126
(GRCh37/hg19)

Genomic View for RPS20P18 Gene

Genes around RPS20P18 on UCSC Golden Path with GeneCards custom track

Cytogenetic band:
RPS20P18 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for RPS20P18 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

RefSeq DNA sequence for RPS20P18 Gene

Proteins for RPS20P18 Gene

Post-translational modifications for RPS20P18 Gene

No Post-translational modifications

No data available for DME Specific Peptides for RPS20P18 Gene

Domains & Families for RPS20P18 Gene

Graphical View of Domain Structure for InterPro Entry

No data available for Gene Families , Protein Domains , Suggested Antigen Peptide Sequences and UniProtKB/Swiss-Prot for RPS20P18 Gene

Function for RPS20P18 Gene

Animal Model Products

Clone Products

No data available for Molecular function , Enzyme Numbers (IUBMB) , Phenotypes From GWAS Catalog , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for RPS20P18 Gene

Localization for RPS20P18 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS , Subcellular locations from the Human Protein Atlas (HPA) and Gene Ontology (GO) - Cellular Components for RPS20P18 Gene

Pathways & Interactions for RPS20P18 Gene

SuperPathways for RPS20P18 Gene

No Data Available

Interacting Proteins for RPS20P18 Gene

Gene Ontology (GO) - Biological Process for RPS20P18 Gene

None

No data available for Pathways by source and SIGNOR curated interactions for RPS20P18 Gene

Drugs & Compounds for RPS20P18 Gene

No Compound Related Data Available

Transcripts for RPS20P18 Gene

mRNA/cDNA for RPS20P18 Gene

(1) Ensembl transcripts including schematic representations, and UCSC links where relevant :

Clone Products

Alternative Splicing Database (ASD) splice patterns (SP) for RPS20P18 Gene

No ASD Table

Relevant External Links for RPS20P18 Gene

GeneLoc Exon Structure for
RPS20P18
ECgene alternative splicing isoforms for
RPS20P18

Expression for RPS20P18 Gene

mRNA expression in normal human tissues from GTEx, Illumina, BioGPS, and CGAP SAGE for RPS20P18 Gene

NURSA nuclear receptor signaling pathways regulating expression of RPS20P18 Gene:

RPS20P18
genes like me logo Genes that share expression patterns with RPS20P18: view

No data available for mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , mRNA differential expression in normal tissues , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners , mRNA Expression by UniProt/SwissProt , Evidence on tissue expression from TISSUES and Phenotype-based relationships between genes and organs from Gene ORGANizer for RPS20P18 Gene

Orthologs for RPS20P18 Gene

Evolution for RPS20P18 Gene

ENSEMBL:
Gene Tree for RPS20P18 (if available)
TreeFam:
Gene Tree for RPS20P18 (if available)

No data available for Orthologs for RPS20P18 Gene

Paralogs for RPS20P18 Gene

No data available for Paralogs for RPS20P18 Gene

Variants for RPS20P18 Gene

Additional Variant Information for RPS20P18 Gene

SNPedia medical, phenotypic, and genealogical associations of SNPs for
RPS20P18

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Sequence variations from dbSNP and Humsavar , Structural Variations from Database of Genomic Variants (DGV) and Variation tolerance for RPS20P18 Gene

Disorders for RPS20P18 Gene

No disorders were found for RPS20P18 Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot , Genatlas and External Links for RPS20P18 Gene

Publications for RPS20P18 Gene

  1. Comparative analysis of processed ribosomal protein pseudogenes in four mammalian genomes. (PMID: 19123937) Balasubramanian S … Gerstein M (Genome biology 2009) 2 3 58

Products for RPS20P18 Gene

Sources for RPS20P18 Gene

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