Aliases for RPS19P2 Gene

Aliases for RPS19P2 Gene

  • Ribosomal Protein S19 Pseudogene 2 2 3
  • Ribosomal Protein S19 (RPS19) Pseudogene 5
  • RPS19_1_86 3
  • AL357055.1 5

External Ids for RPS19P2 Gene

Previous GeneCards Identifiers for RPS19P2 Gene

  • GC00U991016
  • GC01U900053
  • GC01P112811
  • GC01P113010
  • GC01P113423
  • GC01P113513
  • GC01P113712

Summaries for RPS19P2 Gene

GeneCards Summary for RPS19P2 Gene

RPS19P2 (Ribosomal Protein S19 Pseudogene 2) is a Pseudogene. Diseases associated with RPS19P2 include Diamond-Blackfan Anemia.

Additional gene information for RPS19P2 Gene

No data available for Entrez Gene Summary , CIViC Summary , UniProtKB/Swiss-Prot Summary , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , Rfam classification and piRNA Summary for RPS19P2 Gene

Genomics for RPS19P2 Gene

GeneHancer (GH) Regulatory Elements Pubs

Promoters and enhancers for RPS19P2 Gene
GeneHancer (GH) Identifier GH Type GH
Score
GH Sources Gene Association Score Total Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor
Binding Sites
Gene Targets
GH01J113140 Enhancer 1.2 FANTOM5 ENCODE 0.3 -27.5 -27518 2.3 GATAD2A CTCF PRDM10 ZNF512 LEF1 IKZF1 JUND MTA2 ZNF143 PKNOX1 HSALNG0006172 ENSG00000232499 ST7L RPS15P1 LRIG2 WNT2B RPS19P2 MAGI3
GH01J113146 Enhancer 1 Ensembl ENCODE 0.4 -21.7 -21748 2.4 GATAD2A SOX13 ZNF7 ZIC2 RXRB HDAC1 TCF12 TCF7 CTBP1 ZSCAN29 RPS15P1 LRIG2-DT HSALNG0006172 RPS19P2 LRIG2 MAGI3
GH01J113153 Enhancer 0.6 Ensembl 0.4 -15.8 -15758 0.4 GATAD2A CEBPA MNT ZNF140 NFIC RAD21 FOSL2 TFAP4 HNF4A ZFP64 RPS15P1 LRIG2 ST7L ENSG00000232499 AP4B1-AS1 HSALNG0006172 RPS19P2 MAGI3
GH01J113158 Enhancer 0.3 Ensembl ENCODE 0.4 -9.9 -9930 0.7 RPS19P2 HSALNG0006172 LRIG2 MAGI3
GH01J113149 Enhancer 0.2 Ensembl 0.4 -19.9 -19858 0.2 HSALNG0006172 RPS19P2 LRIG2 MAGI3
- Elite GeneHancer and/or Elite GeneHancer-gene association Download GeneHancer data from 2017 publication | Request up-to-date GeneHancer data (full dataset)

GeneHancers around RPS19P2 on the GeneHancer Hub at the UCSC Golden Path

Genomic Locations for RPS19P2 Gene

Genomic Locations for RPS19P2 Gene
chr1:113,168,959-113,169,442
(GRCh38/hg38)
Size:
484 bases
Orientation:
Plus strand
chr1:113,711,611-113,712,051
(GRCh37/hg19)
Size:
441 bases
Orientation:
Plus strand

Genomic View for RPS19P2 Gene

Genes around RPS19P2 on UCSC Golden Path with GeneCards custom track

Cytogenetic band:
RPS19P2 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for RPS19P2 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

RefSeq DNA sequence for RPS19P2 Gene

Proteins for RPS19P2 Gene

Post-translational modifications for RPS19P2 Gene

No Post-translational modifications

No data available for DME Specific Peptides for RPS19P2 Gene

Domains & Families for RPS19P2 Gene

No data available for Gene Families , Protein Domains , Suggested Antigen Peptide Sequences , Graphical View of Domain Structure and UniProtKB/Swiss-Prot for RPS19P2 Gene

Function for RPS19P2 Gene

Phenotypes From GWAS Catalog for RPS19P2 Gene

Animal Model Products

CRISPR Products

No data available for Molecular function , Enzyme Numbers (IUBMB) , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for RPS19P2 Gene

Localization for RPS19P2 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS , Subcellular locations from the Human Protein Atlas (HPA) and Gene Ontology (GO) - Cellular Components for RPS19P2 Gene

Pathways & Interactions for RPS19P2 Gene

PathCards logo

SuperPathways for RPS19P2 Gene

No Data Available

Gene Ontology (GO) - Biological Process for RPS19P2 Gene

None

No data available for Pathways by source , Interacting Proteins and SIGNOR curated interactions for RPS19P2 Gene

Drugs & Compounds for RPS19P2 Gene

No Compound Related Data Available

Transcripts for RPS19P2 Gene

mRNA/cDNA for RPS19P2 Gene

1 Ensembl transcripts including schematic representations, and UCSC links to gene/alias where relevant :

Alternative Splicing Database (ASD) splice patterns (SP) for RPS19P2 Gene

No ASD Table

Relevant External Links for RPS19P2 Gene

GeneLoc Exon Structure for
RPS19P2

Expression for RPS19P2 Gene

mRNA expression in normal human tissues from GTEx, Illumina, BioGPS, and SAGE for RPS19P2 Gene

genes like me logo Genes that share expression patterns with RPS19P2: view

No data available for mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , mRNA differential expression in normal tissues , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners , mRNA Expression by UniProt/SwissProt , Evidence on tissue expression from TISSUES and Phenotype-based relationships between genes and organs from Gene ORGANizer for RPS19P2 Gene

Orthologs for RPS19P2 Gene

Evolution for RPS19P2 Gene

ENSEMBL:
Gene Tree for RPS19P2 (if available)
TreeFam:
Gene Tree for RPS19P2 (if available)

No data available for Orthologs for RPS19P2 Gene

Paralogs for RPS19P2 Gene

No data available for Paralogs for RPS19P2 Gene

Variants for RPS19P2 Gene

Additional Variant Information for RPS19P2 Gene

SNPedia medical, phenotypic, and genealogical associations of SNPs for
RPS19P2

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Sequence variations, with clinical significance, from ClinVar and Humsavar, with links to dbSNP , Additional dbSNP identifiers (rs#s) , Structural Variations from Database of Genomic Variants (DGV) and Variation tolerance for RPS19P2 Gene

Disorders for RPS19P2 Gene

MalaCards: The human disease database

(1) MalaCards diseases for RPS19P2 Gene - From: GeneCards

Disorder Aliases PubMed IDs
diamond-blackfan anemia
  • diamond-blackfan anemia 1
- elite association - COSMIC cancer census association via MalaCards
genes like me logo Genes that share disorders with RPS19P2: view

No data available for UniProtKB/Swiss-Prot , Genatlas and External Links for RPS19P2 Gene

Publications for RPS19P2 Gene

  1. Comparative analysis of processed ribosomal protein pseudogenes in four mammalian genomes. (PMID: 19123937) Balasubramanian S … Gerstein M (Genome biology 2009) 2 3
  2. Ribosomal protein S19 gene mutations in patients with diamond-blackfan anemia and identification of ribosomal protein S19 pseudogenes. (PMID: 10753603) Cmejla R … Jelinek J (Blood cells, molecules & diseases 2000) 2 3

Products for RPS19P2 Gene

Sources for RPS19P2 Gene