Aliases for RPS17P15 Gene

Aliases for RPS17P15 Gene

  • Ribosomal Protein S17 Pseudogene 15 2 3 5
  • RPS17_7_1173 3
  • RPS17P15 5

External Ids for RPS17P15 Gene

Previous GeneCards Identifiers for RPS17P15 Gene

  • GC11U901293
  • GC11M110978

Summaries for RPS17P15 Gene

GeneCards Summary for RPS17P15 Gene

RPS17P15 (Ribosomal Protein S17 Pseudogene 15) is a Pseudogene.

Additional gene information for RPS17P15 Gene

No data available for Entrez Gene Summary , CIViC Summary , UniProtKB/Swiss-Prot Summary , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , Rfam classification and piRNA Summary for RPS17P15 Gene

Genomics for RPS17P15 Gene

GeneHancer (GH) Regulatory Elements Pubs

Promoters and enhancers for RPS17P15 Gene
GeneHancer (GH) Identifier GH Type GH
Score
GH Sources Gene Association Score Total Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor
Binding Sites
Gene Targets
GH11J111107 Enhancer 0.3 Ensembl 250.7 -1.7 -1706 0.8 SPI1 ENSG00000270202 RPS17P15 piR-38369 lnc-POU2AF1-4 lnc-POU2AF1-5 LINC02550 C11orf53 ARHGAP20
GH11J111104 Enhancer 0.2 Ensembl 250.7 +1.6 1594 0.2 RPS17P15 piR-38369 lnc-POU2AF1-5 lnc-POU2AF1-6 LINC02550 ENSG00000287028 LOC102723966 C11orf53 ARHGAP20
- Elite GeneHancer and/or Elite GeneHancer-gene association Download GeneHancer data from 2017 publication | Request up-to-date GeneHancer data (full dataset)

GeneHancers around RPS17P15 on the GeneHancer Hub at the UCSC Golden Path

Genomic Locations for RPS17P15 Gene

Latest Assembly
chr11:111,105,547-111,105,895
(GRCh38/hg38)
Size:
349 bases
Orientation:
Minus strand

Previous Assembly
chr11:110,976,292-110,976,619
(GRCh37/hg19 by Entrez Gene)
Size:
328 bases
Orientation:
Minus strand

chr11:110,976,271-110,976,619
(GRCh37/hg19 by Ensembl)
Size:
349 bases
Orientation:
Minus strand

Genomic View for RPS17P15 Gene

Genes around RPS17P15 on UCSC Golden Path with GeneCards custom track

Cytogenetic band:
RPS17P15 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for RPS17P15 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

RefSeq DNA sequence for RPS17P15 Gene

Proteins for RPS17P15 Gene

Post-translational modifications for RPS17P15 Gene

No Post-translational modifications

No data available for DME Specific Peptides for RPS17P15 Gene

Domains & Families for RPS17P15 Gene

No data available for Gene Families , Protein Domains , Suggested Antigen Peptide Sequences , Graphical View of Domain Structure and UniProtKB/Swiss-Prot for RPS17P15 Gene

Function for RPS17P15 Gene

No data available for Molecular function , Enzyme Numbers (IUBMB) , Phenotypes From GWAS Catalog , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for RPS17P15 Gene

Localization for RPS17P15 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS , Subcellular locations from the Human Protein Atlas (HPA) and Gene Ontology (GO) - Cellular Components for RPS17P15 Gene

Pathways & Interactions for RPS17P15 Gene

PathCards logo

SuperPathways for RPS17P15 Gene

No Data Available

Gene Ontology (GO) - Biological Process for RPS17P15 Gene

None

No data available for Pathways by source , Interacting Proteins and SIGNOR curated interactions for RPS17P15 Gene

Drugs & Compounds for RPS17P15 Gene

No Compound Related Data Available

Transcripts for RPS17P15 Gene

mRNA/cDNA for RPS17P15 Gene

1 Ensembl transcripts including schematic representations, and UCSC links to gene/alias where relevant :

Alternative Splicing Database (ASD) splice patterns (SP) for RPS17P15 Gene

No ASD Table

Relevant External Links for RPS17P15 Gene

GeneLoc Exon Structure for
RPS17P15

Expression for RPS17P15 Gene

mRNA expression in normal human tissues from GTEx, Illumina, BioGPS, and SAGE for RPS17P15 Gene

mRNA differential expression in normal tissues according to GTEx for RPS17P15 Gene

This gene is overexpressed in Testis (x51.6).
genes like me logo Genes that share expression patterns with RPS17P15: view

No data available for mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners , mRNA Expression by UniProt/SwissProt , Evidence on tissue expression from TISSUES and Phenotype-based relationships between genes and organs from Gene ORGANizer for RPS17P15 Gene

Orthologs for RPS17P15 Gene

Evolution for RPS17P15 Gene

ENSEMBL:
Gene Tree for RPS17P15 (if available)
TreeFam:
Gene Tree for RPS17P15 (if available)
Alliance of Genome Resources:
Additional Orthologs for RPS17P15

No data available for Orthologs for RPS17P15 Gene

Paralogs for RPS17P15 Gene

No data available for Paralogs for RPS17P15 Gene

Variants for RPS17P15 Gene

Additional Variant Information for RPS17P15 Gene

SNPedia medical, phenotypic, and genealogical associations of SNPs for
RPS17P15
Leiden Open Variation Database (LOVD)
RPS17P15

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Sequence variations, with clinical significance, from ClinVar and Humsavar, with links to dbSNP , dbSNP identifiers (rs#s) for variants without ClinVar clinical significance , Structural Variations from Database of Genomic Variants (DGV) and Variation tolerance for RPS17P15 Gene

Disorders for RPS17P15 Gene

No disorders were found for RPS17P15 Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot , Genatlas and External Links for RPS17P15 Gene

Publications for RPS17P15 Gene

  1. Comparative analysis of processed ribosomal protein pseudogenes in four mammalian genomes. (PMID: 19123937) Balasubramanian S … Gerstein M (Genome biology 2009) 2 3

No data available for Mastermind for RPS17P15 Gene

Products for RPS17P15 Gene

Sources for RPS17P15 Gene