Aliases for RPS17P12 Gene

Aliases for RPS17P12 Gene

  • Ribosomal Protein S17 Pseudogene 12 2 3
  • RPS17_5_854 3

External Ids for RPS17P12 Gene

Previous GeneCards Identifiers for RPS17P12 Gene

  • GC07M137635
  • GC07M137983

Summaries for RPS17P12 Gene

GeneCards Summary for RPS17P12 Gene

RPS17P12 (Ribosomal Protein S17 Pseudogene 12) is a Pseudogene.

Additional gene information for RPS17P12 Gene

No data available for Entrez Gene Summary , CIViC Summary , UniProtKB/Swiss-Prot Summary , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , Rfam classification and piRNA Summary for RPS17P12 Gene

Genomics for RPS17P12 Gene

GeneHancer (GH) Regulatory Elements for RPS17P12 Gene

Promoters and enhancers for RPS17P12 Gene
GeneHancer (GH) Identifier GH Type GH
Score
GH Sources Gene Association Score Total Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor
Binding Sites
Gene Targets
GH07J138303 Enhancer 0.8 Ensembl ENCODE 0.4 -5.5 -5543 2.1 ZNF217 CUX1 GATAD2B CTBP1 YY1 SPI1 GATA3 DPF2 RCOR1 ZNF169 TRIM24 ENSG00000201465 ENSG00000252820 hsa-miR-1273e-072 RPS17P12
- Elite GeneHancer and/or Elite GeneHancer-gene association Download GeneHancer data from 2017 publication | Request up-to-date GeneHancer data (full dataset)

GeneHancers around RPS17P12 on UCSC Golden Path with GeneCards custom track

Genomic Locations for RPS17P12 Gene

Genomic Locations for RPS17P12 Gene
chr7:138,298,061-138,298,507
(GRCh38/hg38)
Size:
447 bases
Orientation:
Minus strand
chr7:137,982,806-137,983,252
(GRCh37/hg19)
Size:
447 bases
Orientation:
Minus strand

Genomic View for RPS17P12 Gene

Genes around RPS17P12 on UCSC Golden Path with GeneCards custom track

Cytogenetic band:
RPS17P12 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for RPS17P12 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

RefSeq DNA sequence for RPS17P12 Gene

Proteins for RPS17P12 Gene

Post-translational modifications for RPS17P12 Gene

No Post-translational modifications

No data available for DME Specific Peptides for RPS17P12 Gene

Domains & Families for RPS17P12 Gene

No data available for Gene Families , Protein Domains , Suggested Antigen Peptide Sequences , Graphical View of Domain Structure and UniProtKB/Swiss-Prot for RPS17P12 Gene

Function for RPS17P12 Gene

Phenotypes for RPS17P12 Gene

genes like me logo Genes that share phenotypes with RPS17P12: view

No data available for Molecular function , Enzyme Numbers (IUBMB) , Phenotypes From GWAS Catalog , Gene Ontology (GO) - Molecular Function , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for RPS17P12 Gene

Localization for RPS17P12 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS , Subcellular locations from the Human Protein Atlas (HPA) and Gene Ontology (GO) - Cellular Components for RPS17P12 Gene

Pathways & Interactions for RPS17P12 Gene

PathCards logo

SuperPathways for RPS17P12 Gene

No Data Available
;

Gene Ontology (GO) - Biological Process for RPS17P12 Gene

None

No data available for Pathways by source , Interacting Proteins and SIGNOR curated interactions for RPS17P12 Gene

Drugs & Compounds for RPS17P12 Gene

No Compound Related Data Available

Transcripts for RPS17P12 Gene

mRNA/cDNA for RPS17P12 Gene

1 REFSEQ mRNAs :

Alternative Splicing Database (ASD) splice patterns (SP) for RPS17P12 Gene

No ASD Table

Relevant External Links for RPS17P12 Gene

GeneLoc Exon Structure for
RPS17P12

Expression for RPS17P12 Gene

mRNA expression in normal human tissues from GTEx, Illumina, BioGPS, and SAGE for RPS17P12 Gene

genes like me logo Genes that share expression patterns with RPS17P12: view

No data available for mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , mRNA differential expression in normal tissues , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners , mRNA Expression by UniProt/SwissProt , Evidence on tissue expression from TISSUES and Phenotype-based relationships between genes and organs from Gene ORGANizer for RPS17P12 Gene

Orthologs for RPS17P12 Gene

No data available for Orthologs and Evolution for RPS17P12 Gene

Paralogs for RPS17P12 Gene

No data available for Paralogs for RPS17P12 Gene

Variants for RPS17P12 Gene

Additional Variant Information for RPS17P12 Gene

SNPedia medical, phenotypic, and genealogical associations of SNPs for
RPS17P12

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Sequence variations, with clinical significance, from ClinVar and Humsavar, with links to dbSNP , Additional dbSNP identifiers (rs#s) , Structural Variations from Database of Genomic Variants (DGV) and Variation tolerance for RPS17P12 Gene

Disorders for RPS17P12 Gene

Additional Disease Information for RPS17P12

Genetic Association Database
(GAD)

No disorders were found for RPS17P12 Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot and Genatlas for RPS17P12 Gene

Publications for RPS17P12 Gene

  1. Comparative analysis of processed ribosomal protein pseudogenes in four mammalian genomes. (PMID: 19123937) Balasubramanian S … Gerstein M (Genome biology 2009) 2 3 54
  2. Framingham Heart Study genome-wide association: results for pulmonary function measures. (PMID: 17903307) Wilk JB … O'Connor GT (BMC medical genetics 2007) 41 54
  3. Human chromosome 7: DNA sequence and biology. (PMID: 12690205) Scherer SW … Tsui LC (Science (New York, N.Y.) 2003) 3 54

No data available for Mastermind for RPS17P12 Gene

Products for RPS17P12 Gene

Sources for RPS17P12 Gene