Free for academic non-profit institutions. Other users need a Commercial license

Aliases for RPS15P9 Gene

Subcategory (RNA class) for RPS15P9 Gene

lncRNA

Aliases for RPS15P9 Gene

  • Ribosomal Protein S15 Pseudogene 9 2 3 5
  • RPS15_5_1616 3

External Ids for RPS15P9 Gene

ORGUL Members for RPS15P9 Gene

Previous GeneCards Identifiers for RPS15P9 Gene

  • GC19M001258
  • GC19M001308
  • GC19M001309
  • GC19M001320
  • GC19M001333
  • GC19M001343
  • GC19M001480
  • GC19M001354
  • GC19M001364
  • GC19M001375
  • GC19M001395
  • GC19M001416
  • GC19M001430
  • GC19M001442
  • GC19M001455

Summaries for RPS15P9 Gene

GeneCards Summary for RPS15P9 Gene

RPS15P9 (Ribosomal Protein S15 Pseudogene 9) is a Pseudogene, and is affiliated with the lncRNA class.

Additional gene information for RPS15P9 Gene

No data available for Entrez Gene Summary , CIViC summary , UniProtKB/Swiss-Prot , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , fRNAdb sequence ontologies and piRNA Summary for RPS15P9 Gene

Genomics for RPS15P9 Gene

GeneHancer (GH) Regulatory Elements for RPS15P9 Gene

Promoters and enhancers for RPS15P9 Gene
GeneHancer (GH) Identifier GH Type GH
Score
GH Sources Gene Association Score Total Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor
Binding Sites
Gene Targets
GH19J001307 Promoter 0.9 Ensembl 600.7 -0.2 -155 0.2 ZNF121 MTA3 ZBTB11 HDAC2 NR2C2 BCOR NRF1 ZMYM3 HDGF TEAD3 RPS15P9 GC19M001500
GH19J001236 Promoter/Enhancer 2.7 EPDnew FANTOM5 Ensembl ENCODE dbSUPER 12.6 +50.9 50942 41.2 HDGF MTA3 SP1 ZFX CC2D1A ZNF652 ELF3 CTCF MNT SIX5 CIRBP C19orf24 MIDN CBARP ATP5F1D SF3A2 TMEM259 TCF3 LOC100288123 DAZAP1
GH19J001353 Promoter/Enhancer 2 EPDnew Ensembl ENCODE 13.2 -47.7 -47656 3.2 SP1 ELF3 ZFX ZNF148 NKRF POLR2A ZSCAN21 TFE3 ZBTB7A SP7 PWWP3A DAZAP1 SF3A2 PTBP1 RPS15P9 EFNA2 TMEM259 ENSG00000267317 RPS15 C19orf24
GH19J001372 Enhancer 0.9 ENCODE 13.3 -66.2 -66183 2 ZNF652 ELF3 CEBPG RERE AHR TFE3 SP1 PPARG SP5 KAT8 ENSG00000279488 RPS15P9 EFNA2 PWWP3A GC19P001362
GH19J001357 Enhancer 0.5 ENCODE 13.2 -50.3 -50312 0.8 PKNOX1 ZNF600 ZIC2 POLR2A ZNF341 SIN3A NANOG RPS15P9 EFNA2 C19orf24 GC19P001362 PWWP3A
- Elite GeneHancer and/or Elite GeneHancer-gene association Download GeneHancer data from 2017 publication | Request up-to-date GeneHancer data (full dataset)

GeneHancers around RPS15P9 on UCSC Golden Path with GeneCards custom track

Genomic Locations for RPS15P9 Gene

Genomic Locations for RPS15P9 Gene
chr19:1,307,401-1,307,745
(GRCh38/hg38)
Size:
345 bases
Orientation:
Minus strand
chr19:1,307,385-1,309,589
(GRCh37/hg19)
Size:
2,205 bases
Orientation:
Minus strand

Genomic View for RPS15P9 Gene

Genes around RPS15P9 on UCSC Golden Path with GeneCards custom track

Cytogenetic band:
RPS15P9 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for RPS15P9 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

RefSeq DNA sequence for RPS15P9 Gene

Proteins for RPS15P9 Gene

Post-translational modifications for RPS15P9 Gene

No Post-translational modifications

No data available for DME Specific Peptides for RPS15P9 Gene

Domains & Families for RPS15P9 Gene

Graphical View of Domain Structure for InterPro Entry

No data available for Gene Families , Protein Domains , Suggested Antigen Peptide Sequences and UniProtKB/Swiss-Prot for RPS15P9 Gene

Function for RPS15P9 Gene

Phenotypes From GWAS Catalog for RPS15P9 Gene

Animal Model Products

CRISPR Products

No data available for Molecular function , Enzyme Numbers (IUBMB) , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for RPS15P9 Gene

Localization for RPS15P9 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS , Subcellular locations from the Human Protein Atlas (HPA) and Gene Ontology (GO) - Cellular Components for RPS15P9 Gene

Pathways & Interactions for RPS15P9 Gene

PathCards logo

SuperPathways for RPS15P9 Gene

No Data Available

Interacting Proteins for RPS15P9 Gene

Gene Ontology (GO) - Biological Process for RPS15P9 Gene

None

No data available for Pathways by source and SIGNOR curated interactions for RPS15P9 Gene

Drugs & Compounds for RPS15P9 Gene

No Compound Related Data Available

Transcripts for RPS15P9 Gene

mRNA/cDNA for RPS15P9 Gene

(1) Ensembl transcripts including schematic representations, and UCSC links to gene/alias where relevant :

CRISPR Products

Alternative Splicing Database (ASD) splice patterns (SP) for RPS15P9 Gene

No ASD Table

Relevant External Links for RPS15P9 Gene

GeneLoc Exon Structure for
RPS15P9
ECgene alternative splicing isoforms for
RPS15P9

Expression for RPS15P9 Gene

mRNA expression in normal human tissues from GTEx, Illumina, BioGPS, and CGAP SAGE for RPS15P9 Gene

NURSA nuclear receptor signaling pathways regulating expression of RPS15P9 Gene:

RPS15P9
genes like me logo Genes that share expression patterns with RPS15P9: view

No data available for mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , mRNA differential expression in normal tissues , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners , mRNA Expression by UniProt/SwissProt , Evidence on tissue expression from TISSUES and Phenotype-based relationships between genes and organs from Gene ORGANizer for RPS15P9 Gene

Orthologs for RPS15P9 Gene

Evolution for RPS15P9 Gene

ENSEMBL:
Gene Tree for RPS15P9 (if available)
TreeFam:
Gene Tree for RPS15P9 (if available)

No data available for Orthologs for RPS15P9 Gene

Paralogs for RPS15P9 Gene

No data available for Paralogs for RPS15P9 Gene

Variants for RPS15P9 Gene

Additional Variant Information for RPS15P9 Gene

SNPedia medical, phenotypic, and genealogical associations of SNPs for
RPS15P9

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Sequence variations from dbSNP and Humsavar , Structural Variations from Database of Genomic Variants (DGV) and Variation tolerance for RPS15P9 Gene

Disorders for RPS15P9 Gene

No disorders were found for RPS15P9 Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot , Genatlas and External Links for RPS15P9 Gene

Publications for RPS15P9 Gene

  1. Comparative analysis of processed ribosomal protein pseudogenes in four mammalian genomes. (PMID: 19123937) Balasubramanian S … Gerstein M (Genome biology 2009) 2 3 58

No data available for External Links for RPS15P9 Gene

Products for RPS15P9 Gene

Sources for RPS15P9 Gene

Content
Loading form....