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Aliases for RPS15P1 Gene
Aliases for RPS15P1 Gene
External Ids for RPS15P1 Gene
- HGNC: 35725
- Entrez Gene: 728428
- Ensembl: ENSG00000236887
Previous GeneCards Identifiers for RPS15P1 Gene
- GC00U990332
- GC01P113543
- GC01P113742
Summaries for RPS15P1 Gene
GeneCards Summary for RPS15P1 Gene
RPS15P1 (Ribosomal Protein S15 Pseudogene 1) is a Pseudogene.
Additional gene information for RPS15P1 Gene
No data available for Entrez Gene Summary , CIViC Summary , UniProtKB/Swiss-Prot Summary , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , Rfam classification and piRNA Summary for RPS15P1 Gene
Genomics for RPS15P1 Gene
GeneHancer (GH) Regulatory Elements Pubs
Promoters and enhancers for RPS15P1 Gene
| GeneHancer (GH) Identifier | GH Type | GH Score |
GH Sources | Gene Association Score | Total Score | TSS distance (kb) | Number of Genes Away | Size (kb) | Transcription Factor Binding Sites |
Gene Targets |
|---|---|---|---|---|---|---|---|---|---|---|
| GH01J113199 | Enhancer | 0.7 | Ensembl ENCODE | 610.9 | +1.8 | 1797 | 2.2 | TEAD4 FOXA1 ZBTB17 NFIC STAT1 NFIB FEZF1 PRDM6 NRF1 ZNF548 | RPS15P1 LRIG2 ENSG00000232499 SLC16A1-AS1 RSBN1 ST7L piR-51819-003 LOC643441 MAGI3 | |
| GH01J113197 | Enhancer | 0.5 | Ensembl | 600.7 | -0.9 | -907 | 1 | PKNOX1 ZBTB20 OSR2 BCOR EBF1 MEIS2 ZMYM3 ESRRA | RPS15P1 LOC643441 lnc-LRIG2-6 LRIG2 MAGI3 | |
| GH01J113198 | Enhancer | 0.3 | Ensembl | 600.7 | -0.1 | -106 | 0.2 | ATF4 ATF3 | RPS15P1 LOC643441 lnc-LRIG2-6 LRIG2 MAGI3 | |
| GH01J113140 | Enhancer | 1.2 | FANTOM5 ENCODE | 16.3 | -57.4 | -57366 | 2.3 | GATAD2A CTCF PRDM10 ZNF512 LEF1 IKZF1 JUND MTA2 ZNF143 PKNOX1 | HSALNG0006172 ENSG00000232499 ST7L RPS15P1 LRIG2 WNT2B RPS19P2 MAGI3 | |
| GH01J113191 | Enhancer | 1 | FANTOM5 Ensembl ENCODE | 17.8 | -6.8 | -6784 | 1.6 | ZBTB33 RUNX3 WT1 ZFHX2 BATF EBF1 ZFP91 TBL1XR1 ATF2 ZEB2 | RPS15P1 lnc-LRIG2-6 LRIG2 MAGI3 |
- Elite GeneHancer and/or Elite GeneHancer-gene association
Download GeneHancer data from 2017 publication |
Request up-to-date GeneHancer data (full dataset)
GeneHancers around RPS15P1 on the GeneHancer Hub at the UCSC Golden Path
Genomic Locations for RPS15P1 Gene
Genomic Locations for RPS15P1 Gene
- chr1:113,198,807-113,199,291
- (GRCh38/hg38)
- Size:
- 485 bases
- Orientation:
- Plus strand
- chr1:113,741,429-113,741,913
- (GRCh37/hg19)
- Size:
- 485 bases
- Orientation:
- Plus strand
Genomic View for RPS15P1 Gene
Genes around RPS15P1 on UCSC Golden Path with GeneCards custom track
- Cytogenetic band:
-
- 1p13.2 by HGNC
- 1p13.2 by Entrez Gene
- 1p13.2 by Ensembl
RPS15P1 Gene in genomic location: bands according to
Ensembl, locations according to GeneLoc
(and/or Entrez Gene and/or Ensembl if different)
Genomic Neighborhood
• Exon Structure
• Gene Density
RefSeq DNA sequence for RPS15P1 Gene
Proteins for RPS15P1 Gene
Post-translational modifications for RPS15P1 Gene
No Post-translational modifications
Antibody Products
Protein Products
- Search Origene for Purified Proteins, MassSpec and Protein Over-expression Lysates for RPS15P1
- Origene Custom Protein Services for RPS15P1
No data available for DME Specific Peptides for RPS15P1 Gene
Domains & Families for RPS15P1 Gene
No data available for Gene Families , Protein Domains , Suggested Antigen Peptide Sequences , Graphical View of Domain Structure and UniProtKB/Swiss-Prot for RPS15P1 Gene
Function for RPS15P1 Gene
Phenotypes From GWAS Catalog for RPS15P1 Gene
Animal Model Products
- Taconic Biosciences: Generate A Custom CRISPR Mouse Model For Your Study
CRISPR Products
- Applied Biological Materials (abm): CRISPR Clones for RPS15P1 - Select products 50% OFF >
- * RPS15P1 CRISPR as ready-to-use vector or virus: ORF | Lenti- | Adeno- | AAV- | Protein Vector - Browse All
- * Gene synthesis, site-directed mutagenesis, subcloning, and more services - Browse All
- Browse CRISPR knockouts for RPS15P1
miRNA Products
Inhibitory RNA Products
Clone Products
No data available for Molecular function , Enzyme Numbers (IUBMB) , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for RPS15P1 Gene
Localization for RPS15P1 Gene
No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS , Subcellular locations from the Human Protein Atlas (HPA) and Gene Ontology (GO) - Cellular Components for RPS15P1 Gene
Transcripts for RPS15P1 Gene
mRNA/cDNA for RPS15P1 Gene
- 1 Ensembl transcripts including schematic representations, and UCSC links to gene/alias where relevant :
-
- ENST00000412567 434 nts (view in UCSC)
CRISPR Products
- Applied Biological Materials (abm): CRISPR Clones for RPS15P1 - Select products 50% OFF >
- * RPS15P1 CRISPR as ready-to-use vector or virus: ORF | Lenti- | Adeno- | AAV- | Protein Vector - Browse All
- * Gene synthesis, site-directed mutagenesis, subcloning, and more services - Browse All
- Browse CRISPR knockouts for RPS15P1
miRNA Products
Inhibitory RNA Products
Clone Products
Relevant External Links for RPS15P1 Gene
- GeneLoc Exon Structure for
- RPS15P1
Expression for RPS15P1 Gene
mRNA differential expression in normal tissues according to GTEx for RPS15P1 Gene
This gene is overexpressed in Testis (x50.8).
Primer Products
No data available for mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners , mRNA Expression by UniProt/SwissProt , Evidence on tissue expression from TISSUES and Phenotype-based relationships between genes and organs from Gene ORGANizer for RPS15P1 Gene
Orthologs for RPS15P1 Gene
No data available for Orthologs for RPS15P1 Gene
Paralogs for RPS15P1 Gene
No data available for Paralogs for RPS15P1 Gene
Variants for RPS15P1 Gene
Additional Variant Information for RPS15P1 Gene
- SNPedia medical, phenotypic, and genealogical associations of SNPs for
- RPS15P1
No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Sequence variations, with clinical significance, from ClinVar and Humsavar, with links to dbSNP , Additional dbSNP identifiers (rs#s) , Structural Variations from Database of Genomic Variants (DGV) and Variation tolerance for RPS15P1 Gene
Disorders for RPS15P1 Gene
No disorders were found for RPS15P1 Gene.
No data available for MalaCards , UniProtKB/Swiss-Prot , Genatlas and External Links for RPS15P1 Gene
Publications for RPS15P1 Gene
- Comparative analysis of processed ribosomal protein pseudogenes in four mammalian genomes. (PMID: 19123937) Balasubramanian S … Gerstein M (Genome biology 2009) 2 3
No data available for Mastermind for RPS15P1 Gene
Products for RPS15P1 Gene
- Browse OriGene Antibodies
- Custom Antibody Services
- Browse OriGene ELISA Kits
- Custom Assay Services
- Search Origene for Purified Proteins, MassSpec and Protein Over-expression Lysates for RPS15P1
- Origene Custom Protein Services for RPS15P1
- Browse OriGene Inhibitory RNA Products For RPS15P1
- Browse OriGene qPCR primer pairs and template standards
- Browse CRISPR knockouts for RPS15P1
- Custom cloning services - gene synthesis, subcloning, mutagenesis, variant library, vector shuttling
- Browse OriGene miRNA Products For RPS15P1
- Browse Sino Biological cDNA Clones
- Browse Sino Biological Recombinant Proteins
- Browse Sino Biological Cell Lysates
- Browse Sino Biological Antibodies
- Browse Sino Biological Assays
- Browse ELISA Kits
- Browse CRO Services
- High-throughput Antibody Production Service
- Protein Production Service
- Epitope Tag Antibodies & Reporter Protein Antibodies
- Lentiviral ORF Clones
- Browse GeneCopoeia Cell Lines
- Search GeneCopoeia for knockout CRISPR/Cas9 clones, lentivirus, and/or AAV products for RPS15P1
- Search GeneCopoeia for ORF cDNA, lentivirus, AAV viral particles, and/or promoter clone products for RPS15P1
- Search GeneCopoeia for miRNA 3'UTR Target clone products for RPS15P1
- Search GeneCopoeia for shRNA, lentivirus, and/or AAV clone products for RPS15P1
Sources for RPS15P1 Gene
- (1) GeneCards
- (2) HGNC
- (3) NCBI Entrez Gene
- (4) UniProtKB/Swiss-Prot
- (5) Ensembl
- (6) OMIM
- (7) GeneLoc
- (8) Gene Wiki
- (9) UCSC
- (10) PhosphoSitePlus
- (11) Cell Signaling Technology
- (12) GO
- (13) UniProtKB/TrEMBL
- (14) InterPro
- (15) ProtoNet
- (16) Blocks
- (17) MGI
- (18) IUBMB
- (19) KEGG
- (20) MINT
- (21) STRING
- (22) IntAct
- (23) Novoseek
- (24) PharmGKB
- (25) DrugBank
- (26) HMDB
- (27) ASD
- (28) SAGE
- (29) SOURCE
- (30) HomoloGene
- (31) PanEnsembl
- (32) euGenes
- (33) SGD
- (34) FlyBase
- (35) WormBase
- (36) Pseudogene
- (37) DGV
- (38) dbSNP
- (39) GenAtlas
- (40) HGMD
- (41) GAD
- (42) BGMUT
- (43) HuGE
- (44) Atlas
- (45) GenBank
- (46) HORDE
- (47) HUGE
- (48) IMGT
- (49) Leiden
- (50) miRBase
- (51) DME
- (52) OriGene
- (53) PubMed
- (54) R&D Systems
- (55) TGDB
- (56) Tocris
- (57) Abcam
- (58) Novus Biologicals
- (59) ProSpec
- (60) Sino Biological
- (61) GenScript
- (62) Qiagen
- (63) OCA
- (64) Proteopedia
- (65) MOPED
- (66) neXtProt
- (67) Reactome
- (68) GeneGo (Thomson Reuters)
- (69) DISEASES
- (70) SIMAP
- (71) GenomeRNAi
- (72) LifeMap
- (73) miRTarBase
- (74) MalaCards
- (75) Invitrogen
- (76) BitterDB
- (77) ESI-BIO
- (78) RefSeq
- (79) BioSystems
- (80) MaxQB
- (81) IUPHAR
- (82) BioGPS
- (83) Illumina
- (84) COMPARTMENTS
- (85) HOMER
- (86) PaxDb
- (87) ApexBio
- (88) Addgene
- (89) antibodies-online
- (90) CYP
- (91) NONCODE
- (92) TreeFam
- (93) PathCards
- (94) GeneReviews
- (95) GeneTex
- (96) Taconic Biosciences
- (97) GTEx
- (98) ProteomicsDB
- (99) SCBT
- (100) DGIdb
- (101) ClinicalTrials
- (102) RVIS
- (103) SIGNOR
- (104) diseasecard
- (105) NIH Rare Diseases
- (106) Orphanet
- (107) UMLS
- (108) GTR
- (109) Disease Ontology
- (110) Genetics Home Reference
- (111) MeSH
- (112) MedlinePlus
- (113) CDC
- (114) NINDS
- (115) NCBI Bookshelf
- (116) ClinVar
- (117) Gene Damage Index
- (118) HPO
- (119) UDN
- (120) VISTA
- (121) FANTOM5
- (122) ENCODE
- (123) ProSci
- (124) Horizon
- (125) The Signaling Pathways Project (SPP)
- (126) IID
- (127) VectorBuilder
- (128) SNPedia
- (129) BRCA Exchange
- (130) CIViC
- (131) ProteoGenix
- (132) dbSUPER
- (133) TISSUES
- (134) Gene ORGANizer
- (135) abm
- (136) Human Protein Atlas
- (137) GWAS Catalog
- (138) Monarch Initiative
- (139) DataMed
- (140) HumanCyc
- (141) UCNEbase
- (142) EPDnew
- (143) Applied Biosystems
- (144) GlyConnect
- (145) Aminode
- (146) GeneCopoeia
- (147) GPS-Prot
- (148) RNACentral
- (149) LncRNADisease
- (150) LOVD
- (151) miR2Disease
- (152) DiseaseEnhancer
- (153) Boster Bio
- (154) Biorbyt
- (155) Biocompare
- (156) Mastermind
- (157) CTD^2 Dashboard
- (158) CraniofacialAtlas
- (159) GeneImprint
- (160) Synthego
- (161) ENA
- (162) GtRNAdb
- (163) LncBase
- (164) LncBook
- (165) LNCipedia
- (166) Modomics
- (167) PDBe
- (168) Rfam
- (169) SILVA
- (170) snOPY
- (171) SRPDB
- (172) GENCODE
- (173) TarBase
- (174) Signalway Antibody
- (175) Open Targets Platform
- (176) 5SRRNADB
- (177) snoDB
- (178) MirGeneDB