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Aliases for RPS15AP9 Gene

Aliases for RPS15AP9 Gene

  • Ribosomal Protein S15a Pseudogene 9 2 3 5
  • RPS15A_2_91 3

External Ids for RPS15AP9 Gene

Previous GeneCards Identifiers for RPS15AP9 Gene

  • GC01P117481
  • GC01P117681

Summaries for RPS15AP9 Gene

GeneCards Summary for RPS15AP9 Gene

RPS15AP9 (Ribosomal Protein S15a Pseudogene 9) is a Pseudogene.

Additional gene information for RPS15AP9 Gene

No data available for Entrez Gene Summary , CIViC summary , UniProtKB/Swiss-Prot , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , fRNAdb sequence ontologies and piRNA Summary for RPS15AP9 Gene

Genomics for RPS15AP9 Gene

GeneHancer (GH) Regulatory Elements for RPS15AP9 Gene

Promoters and enhancers for RPS15AP9 Gene
GeneHancer (GH) Identifier GH Type GH
Score
GH Sources Gene Association Score Total Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor
Binding Sites
Gene Targets
GH01I117141 Enhancer 0.6 ENCODE 0.8 +4.2 4224 1.2 ZNF189 JUN EP300 ZKSCAN1 JUND POLR2A FOS RCOR1 CHD2 VTCN1 ENSG00000212266 RPS15AP9 ENSG00000277141
GH01I117146 Enhancer 1.1 Ensembl ENCODE 0.4 +9.2 9156 2.1 PKNOX1 ARNT FEZF1 ZNF2 ZNF213 ELK1 FOS DEK TSHZ1 ZNF488 VTCN1 ATP1A1-AS1 RPS15AP9 ENSG00000277141
GH01I117128 Enhancer 0.6 Ensembl 0.4 -9.5 -9489 0.6 CTCF ZNF654 ZNF692 ZNF143 SMC3 REST RAD21 ZBTB40 MIR942 TTF2 MAN1A2 VTCN1 TRIM45 RPS15AP9
GH01I117181 Enhancer 0.8 ENCODE 0.3 +43.8 43802 1.1 PKNOX1 ATF1 ARNT RFX5 FOS ATF7 CREM REST ZEB2 ZNF592 GDAP2 VTCN1 RPS15AP9 ENSG00000277141
GH01I117209 Promoter/Enhancer 1.2 EPDnew ENCODE 0.2 +72.5 72538 2.7 SMARCE1 GTF2F1 ZNF687 GATAD2B DPF2 MNT ELF1 ZNF592 ZNF217 CTBP1 VTCN1 ENSG00000212266 ENSG00000277141 RPS15AP9
- Elite GeneHancer and/or Elite GeneHancer-gene association Download GeneHancer data dump

GeneHancers around RPS15AP9 on UCSC Golden Path with GeneCards custom track

Genomic Locations for RPS15AP9 Gene

Genomic Locations for RPS15AP9 Gene
chr1:117,138,190-117,138,648
(GRCh38/hg38)
Size:
459 bases
Orientation:
Plus strand
chr1:117,680,787-117,681,270
(GRCh37/hg19)

Genomic View for RPS15AP9 Gene

Genes around RPS15AP9 on UCSC Golden Path with GeneCards custom track

Cytogenetic band:
RPS15AP9 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for RPS15AP9 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

RefSeq DNA sequence for RPS15AP9 Gene

Proteins for RPS15AP9 Gene

Post-translational modifications for RPS15AP9 Gene

No Post-translational modifications

No data available for DME Specific Peptides for RPS15AP9 Gene

Domains & Families for RPS15AP9 Gene

Graphical View of Domain Structure for InterPro Entry

No data available for Gene Families , Protein Domains , Suggested Antigen Peptide Sequences and UniProtKB/Swiss-Prot for RPS15AP9 Gene

Function for RPS15AP9 Gene

Phenotypes for RPS15AP9 Gene

GenomeRNAi human phenotypes for RPS15AP9:
genes like me logo Genes that share phenotypes with RPS15AP9: view

Animal Model Products

Clone Products

No data available for Molecular function , Enzyme Numbers (IUBMB) , Phenotypes From GWAS Catalog , Gene Ontology (GO) - Molecular Function , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for RPS15AP9 Gene

Localization for RPS15AP9 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS , Subcellular locations from the Human Protein Atlas (HPA) and Gene Ontology (GO) - Cellular Components for RPS15AP9 Gene

Pathways & Interactions for RPS15AP9 Gene

SuperPathways for RPS15AP9 Gene

No Data Available

Interacting Proteins for RPS15AP9 Gene

Gene Ontology (GO) - Biological Process for RPS15AP9 Gene

None

No data available for Pathways by source and SIGNOR curated interactions for RPS15AP9 Gene

Drugs & Compounds for RPS15AP9 Gene

No Compound Related Data Available

Transcripts for RPS15AP9 Gene

mRNA/cDNA for RPS15AP9 Gene

(1) Ensembl transcripts including schematic representations, and UCSC links where relevant :

Clone Products

Alternative Splicing Database (ASD) splice patterns (SP) for RPS15AP9 Gene

No ASD Table

Relevant External Links for RPS15AP9 Gene

GeneLoc Exon Structure for
RPS15AP9
ECgene alternative splicing isoforms for
RPS15AP9

Expression for RPS15AP9 Gene

mRNA expression in normal human tissues from GTEx, Illumina, BioGPS, and CGAP SAGE for RPS15AP9 Gene

NURSA nuclear receptor signaling pathways regulating expression of RPS15AP9 Gene:

RPS15AP9
genes like me logo Genes that share expression patterns with RPS15AP9: view

No data available for mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , mRNA differential expression in normal tissues , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners , mRNA Expression by UniProt/SwissProt , Evidence on tissue expression from TISSUES and Phenotype-based relationships between genes and organs from Gene ORGANizer for RPS15AP9 Gene

Orthologs for RPS15AP9 Gene

Evolution for RPS15AP9 Gene

ENSEMBL:
Gene Tree for RPS15AP9 (if available)
TreeFam:
Gene Tree for RPS15AP9 (if available)

No data available for Orthologs for RPS15AP9 Gene

Paralogs for RPS15AP9 Gene

No data available for Paralogs for RPS15AP9 Gene

Variants for RPS15AP9 Gene

Additional Variant Information for RPS15AP9 Gene

SNPedia medical, phenotypic, and genealogical associations of SNPs for
RPS15AP9

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Sequence variations from dbSNP and Humsavar , Structural Variations from Database of Genomic Variants (DGV) and Variation tolerance for RPS15AP9 Gene

Disorders for RPS15AP9 Gene

No disorders were found for RPS15AP9 Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot , Genatlas and External Links for RPS15AP9 Gene

Publications for RPS15AP9 Gene

  1. Comparative analysis of processed ribosomal protein pseudogenes in four mammalian genomes. (PMID: 19123937) Balasubramanian S … Gerstein M (Genome biology 2009) 2 3 58
  2. The sequence of the human genome. (PMID: 11181995) Venter JC … Zhu X (Science (New York, N.Y.) 2001) 3 58

Products for RPS15AP9 Gene

Sources for RPS15AP9 Gene

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