Aliases for RPS15AP35 Gene

Aliases for RPS15AP35 Gene

  • Ribosomal Protein S15a Pseudogene 35 2 3
  • Ribosomal Protein S15a (RPS15A) Pseudogene 5
  • RPS15A_23_1592 3
  • AC011825.1 5

External Ids for RPS15AP35 Gene

Previous GeneCards Identifiers for RPS15AP35 Gene

  • GC18M027910
  • GC18M029656

Summaries for RPS15AP35 Gene

GeneCards Summary for RPS15AP35 Gene

RPS15AP35 (Ribosomal Protein S15a Pseudogene 35) is a Pseudogene.

Additional gene information for RPS15AP35 Gene

No data available for Entrez Gene Summary , CIViC Summary , UniProtKB/Swiss-Prot Summary , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , Rfam classification and piRNA Summary for RPS15AP35 Gene

Genomics for RPS15AP35 Gene

GeneHancer (GH) Regulatory Elements Pubs

Promoters and enhancers for RPS15AP35 Gene
GeneHancer (GH) Identifier GH Type GH
Score
GH Sources Gene Association Score Total Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor
Binding Sites
Gene Targets
GH18J032084 Enhancer 1.2 FANTOM5 ENCODE dbSUPER 0.4 -9.3 -9278 2.5 FEZF1 ZEB1 ZIC2 ZNF610 IRF4 TRIM22 ZNF843 PRDM6 CBFB TAF1 TRAPPC8 RNF138 RPS15AP35 ENSG00000263917 RNF125
GH18J032080 Enhancer 0.5 Ensembl 0.7 -4.4 -4399 0.6 EHMT2 ZBTB33 CEBPG CEBPB HLF SPI1 TRIM24 TRAPPC8 RNU6-1050P RPS15AP35 RNF138 ENSG00000263917 RNF125
- Elite GeneHancer and/or Elite GeneHancer-gene association Download GeneHancer data from 2017 publication | Request up-to-date GeneHancer data (full dataset)

GeneHancers around RPS15AP35 on the GeneHancer Hub at the UCSC Golden Path

Genomic Locations for RPS15AP35 Gene

Latest Assembly
chr18:32,075,846-32,076,302
(GRCh38/hg38)
Size:
457 bases
Orientation:
Minus strand

Previous Assembly
chr18:29,655,809-29,656,265
(GRCh37/hg19 by Entrez Gene)
Size:
457 bases
Orientation:
Minus strand

chr18:29,655,848-29,656,235
(GRCh37/hg19 by Ensembl)
Size:
388 bases
Orientation:
Minus strand

Genomic View for RPS15AP35 Gene

Genes around RPS15AP35 on UCSC Golden Path with GeneCards custom track

Cytogenetic band:
RPS15AP35 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for RPS15AP35 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

RefSeq DNA sequence for RPS15AP35 Gene

Proteins for RPS15AP35 Gene

Post-translational modifications for RPS15AP35 Gene

No Post-translational modifications

No data available for DME Specific Peptides for RPS15AP35 Gene

Domains & Families for RPS15AP35 Gene

No data available for Gene Families , Protein Domains , Suggested Antigen Peptide Sequences , Graphical View of Domain Structure and UniProtKB/Swiss-Prot for RPS15AP35 Gene

Function for RPS15AP35 Gene

No data available for Molecular function , Enzyme Numbers (IUBMB) , Phenotypes From GWAS Catalog , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for RPS15AP35 Gene

Localization for RPS15AP35 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS , Subcellular locations from the Human Protein Atlas (HPA) and Gene Ontology (GO) - Cellular Components for RPS15AP35 Gene

Pathways & Interactions for RPS15AP35 Gene

PathCards logo

SuperPathways for RPS15AP35 Gene

No Data Available

Gene Ontology (GO) - Biological Process for RPS15AP35 Gene

None

No data available for Pathways by source , Interacting Proteins and SIGNOR curated interactions for RPS15AP35 Gene

Drugs & Compounds for RPS15AP35 Gene

No Compound Related Data Available

Transcripts for RPS15AP35 Gene

mRNA/cDNA for RPS15AP35 Gene

1 Ensembl transcripts including schematic representations, and UCSC links to gene/alias where relevant :

Alternative Splicing Database (ASD) splice patterns (SP) for RPS15AP35 Gene

No ASD Table

Relevant External Links for RPS15AP35 Gene

GeneLoc Exon Structure for
RPS15AP35

Expression for RPS15AP35 Gene

mRNA expression in normal human tissues from GTEx, Illumina, BioGPS, and SAGE for RPS15AP35 Gene

genes like me logo Genes that share expression patterns with RPS15AP35: view

No data available for mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , mRNA differential expression in normal tissues , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners , mRNA Expression by UniProt/SwissProt , Evidence on tissue expression from TISSUES and Phenotype-based relationships between genes and organs from Gene ORGANizer for RPS15AP35 Gene

Orthologs for RPS15AP35 Gene

Evolution for RPS15AP35 Gene

ENSEMBL:
Gene Tree for RPS15AP35 (if available)
TreeFam:
Gene Tree for RPS15AP35 (if available)

No data available for Orthologs for RPS15AP35 Gene

Paralogs for RPS15AP35 Gene

No data available for Paralogs for RPS15AP35 Gene

Variants for RPS15AP35 Gene

Additional Variant Information for RPS15AP35 Gene

SNPedia medical, phenotypic, and genealogical associations of SNPs for
RPS15AP35

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Sequence variations, with clinical significance, from ClinVar and Humsavar, with links to dbSNP , dbSNP identifiers (rs#s) for variants without ClinVar clinical significance , Structural Variations from Database of Genomic Variants (DGV) and Variation tolerance for RPS15AP35 Gene

Disorders for RPS15AP35 Gene

No disorders were found for RPS15AP35 Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot , Genatlas and External Links for RPS15AP35 Gene

Publications for RPS15AP35 Gene

  1. Comparative analysis of processed ribosomal protein pseudogenes in four mammalian genomes. (PMID: 19123937) Balasubramanian S … Gerstein M (Genome biology 2009) 2 3

No data available for Mastermind for RPS15AP35 Gene

Products for RPS15AP35 Gene

Sources for RPS15AP35 Gene