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Aliases for RPS15AP33 Gene

Subcategory (RNA class) for RPS15AP33 Gene

lncRNA

Aliases for RPS15AP33 Gene

  • Ribosomal Protein S15a Pseudogene 33 2 3
  • RPS15A_21_1479 3
  • AC145285.1 5

External Ids for RPS15AP33 Gene

ORGUL Members for RPS15AP33 Gene

Previous GeneCards Identifiers for RPS15AP33 Gene

  • GC16U900939
  • GC16M028826

Summaries for RPS15AP33 Gene

GeneCards Summary for RPS15AP33 Gene

RPS15AP33 (Ribosomal Protein S15a Pseudogene 33) is a Pseudogene, and is affiliated with the lncRNA class.

Additional gene information for RPS15AP33 Gene

No data available for Entrez Gene Summary , CIViC summary , UniProtKB/Swiss-Prot , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , fRNAdb sequence ontologies and piRNA Summary for RPS15AP33 Gene

Genomics for RPS15AP33 Gene

GeneHancer (GH) Regulatory Elements for RPS15AP33 Gene

Promoters and enhancers for RPS15AP33 Gene
GeneHancer (GH) Identifier GH Type GH
Score
GH Sources Gene Association Score Total Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor
Binding Sites
Gene Targets
GH16I028209 Promoter/Enhancer 2.3 EPDnew Ensembl ENCODE dbSUPER 20.8 +603.1 603071 3.5 HDGF PKNOX1 CLOCK MLX ARNT ARID4B SIN3A FEZF1 DMAP1 ZNF2 XPO6 SH2B1 ENSG00000261766 RPS15AP33 NPIPB9 ENSG00000260853 SPNS1 NFATC2IP ENSG00000260367 RNY1P10
GH16I028844 Promoter/Enhancer 2.1 EPDnew Ensembl ENCODE 11.7 -31.5 -31530 3 DMAP1 IRF4 YY1 SLC30A9 ZNF213 E2F8 ZNF143 ZNF548 SP3 NFYC TUFM SH2B1 ATXN2L NFATC2IP SPNS1 ENSG00000260853 SMG1P2 NPIPB10P ENSG00000260367 NPIPB12
GH16I028973 Promoter/Enhancer 2.1 EPDnew Ensembl ENCODE 11.5 -160.0 -160049 2.4 CLOCK MLX FEZF1 DMAP1 IRF4 YY1 SLC30A9 ZNF213 ZNF416 ZNF143 SPNS1 ENSG00000261067 ENSG00000261766 ATXN2L NPIPB12 NFATC2IP ENSG00000260853 CDIPT SULT1A2 ENSG00000247735
GH16I027867 Enhancer 1 Ensembl ENCODE 20.5 +946.9 946872 0.4 PKNOX1 ARNT ZNF76 ZBTB40 RAD21 EGR1 KLF13 ZNF214 ZHX1 THAP11 RPS15AP33 ENSG00000260796 RNU6-159P RNU6-1241P GC16M027998 GSG1L
GH16I029258 Enhancer 1.6 FANTOM5 Ensembl ENCODE dbSUPER 12.4 -450.0 -449954 11.3 HDGF PKNOX1 FOXA2 MLX ARID4B SIN3A YBX1 FOS MXD4 REST ENSG00000260953 SPNS1 ATXN2L NPIPB9 ENSG00000260853 ENSG00000260367 NPIPB10P SMG1P2 NFATC2IP NPIPB8
- Elite GeneHancer and/or Elite GeneHancer-gene association Download GeneHancer data dump

GeneHancers around RPS15AP33 on UCSC Golden Path with GeneCards custom track

Genomic Locations for RPS15AP33 Gene

Genomic Locations for RPS15AP33 Gene
chr16:28,813,942-28,814,673
(GRCh38/hg38)
Size:
732 bases
Orientation:
Minus strand
chr16:28,825,263-28,825,994
(GRCh37/hg19)

Genomic View for RPS15AP33 Gene

Genes around RPS15AP33 on UCSC Golden Path with GeneCards custom track

Cytogenetic band:
RPS15AP33 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for RPS15AP33 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

RefSeq DNA sequence for RPS15AP33 Gene

Proteins for RPS15AP33 Gene

Post-translational modifications for RPS15AP33 Gene

No Post-translational modifications

No data available for DME Specific Peptides for RPS15AP33 Gene

Domains & Families for RPS15AP33 Gene

Graphical View of Domain Structure for InterPro Entry

No data available for Gene Families , Protein Domains , Suggested Antigen Peptide Sequences and UniProtKB/Swiss-Prot for RPS15AP33 Gene

Function for RPS15AP33 Gene

Phenotypes From GWAS Catalog for RPS15AP33 Gene

Animal Model Products

Clone Products

No data available for Molecular function , Enzyme Numbers (IUBMB) , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for RPS15AP33 Gene

Localization for RPS15AP33 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS , Subcellular locations from the Human Protein Atlas (HPA) and Gene Ontology (GO) - Cellular Components for RPS15AP33 Gene

Pathways & Interactions for RPS15AP33 Gene

SuperPathways for RPS15AP33 Gene

No Data Available

Interacting Proteins for RPS15AP33 Gene

Gene Ontology (GO) - Biological Process for RPS15AP33 Gene

None

No data available for Pathways by source and SIGNOR curated interactions for RPS15AP33 Gene

Drugs & Compounds for RPS15AP33 Gene

No Compound Related Data Available

Transcripts for RPS15AP33 Gene

mRNA/cDNA for RPS15AP33 Gene

(1) Ensembl transcripts including schematic representations, and UCSC links where relevant :

Clone Products

Alternative Splicing Database (ASD) splice patterns (SP) for RPS15AP33 Gene

No ASD Table

Relevant External Links for RPS15AP33 Gene

GeneLoc Exon Structure for
RPS15AP33
ECgene alternative splicing isoforms for
RPS15AP33

Expression for RPS15AP33 Gene

mRNA expression in normal human tissues from GTEx, Illumina, BioGPS, and CGAP SAGE for RPS15AP33 Gene

NURSA nuclear receptor signaling pathways regulating expression of RPS15AP33 Gene:

RPS15AP33
genes like me logo Genes that share expression patterns with RPS15AP33: view

No data available for mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , mRNA differential expression in normal tissues , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners , mRNA Expression by UniProt/SwissProt , Evidence on tissue expression from TISSUES and Phenotype-based relationships between genes and organs from Gene ORGANizer for RPS15AP33 Gene

Orthologs for RPS15AP33 Gene

Evolution for RPS15AP33 Gene

ENSEMBL:
Gene Tree for RPS15AP33 (if available)
TreeFam:
Gene Tree for RPS15AP33 (if available)

No data available for Orthologs for RPS15AP33 Gene

Paralogs for RPS15AP33 Gene

No data available for Paralogs for RPS15AP33 Gene

Variants for RPS15AP33 Gene

Additional Variant Information for RPS15AP33 Gene

SNPedia medical, phenotypic, and genealogical associations of SNPs for
RPS15AP33

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Sequence variations from dbSNP and Humsavar , Structural Variations from Database of Genomic Variants (DGV) and Variation tolerance for RPS15AP33 Gene

Disorders for RPS15AP33 Gene

No disorders were found for RPS15AP33 Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot , Genatlas and External Links for RPS15AP33 Gene

Publications for RPS15AP33 Gene

  1. Comparative analysis of processed ribosomal protein pseudogenes in four mammalian genomes. (PMID: 19123937) Balasubramanian S … Gerstein M (Genome biology 2009) 2 3 58

Products for RPS15AP33 Gene

Sources for RPS15AP33 Gene

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