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Aliases for RPS15AP27 Gene
External Ids for RPS15AP27 Gene
- HGNC: 37011
- NCBI Entrez Gene: 100271613
- Ensembl: ENSG00000236783
Previous GeneCards Identifiers for RPS15AP27 Gene
- GC09U901243
- GC09M110726
Summaries for RPS15AP27 Gene
GeneCards Summary for RPS15AP27 Gene
RPS15AP27 (Ribosomal Protein S15a Pseudogene 27) is a Pseudogene.
Additional gene information for RPS15AP27 Gene
- Alliance of Genome Resources
- Search for RPS15AP27 at DataMed
- Search for RPS15AP27 at HumanCyc
No data available for Entrez Gene Summary , CIViC Summary , UniProtKB/Swiss-Prot Summary , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , Rfam classification and piRNA Summary for RPS15AP27 Gene
Genomics for RPS15AP27 Gene
GeneHancer (GH) Regulatory Elements Pubs
Promoters and enhancers for RPS15AP27 Gene
| GeneHancer (GH) Identifier | GH Type | GH Score |
GH Sources | Gene Association Score | Total Score | TSS distance (kb) | Number of Genes Away | Size (kb) | Transcription Factor Binding Sites |
Gene Targets |
|---|---|---|---|---|---|---|---|---|---|---|
| GH09J107989 | Enhancer | 1 | FANTOM5 Ensembl dbSUPER | 0.3 | -27.3 | -27326 | 8 | CEBPA ATF3 YY1 CEBPB EP300 FOXA2 RXRA ZBTB33 JUND SPI1 | KLF4 lnc-RAD23B-11 RPS15AP27 LOC105376211 lnc-ACTL7B-11 ACTL7B | |
| GH09J107983 | Enhancer | 0.8 | Ensembl ENCODE dbSUPER | 0.4 | -17.6 | -17625 | 5 | MAFF ZNF316 MAFK MAFG CREB1 EMSY | RPS15AP27 lnc-RAD23B-11 LOC105376211 KLF4 ACTL7B lnc-ACTL7B-11 | |
| GH09J107976 | Enhancer | 0.7 | Ensembl ENCODE dbSUPER | 0.4 | -13.0 | -13026 | 1.4 | RAD21 NR2F2 | RPS15AP27 lnc-RAD23B-11 LOC105376211 KLF4 lnc-ACTL7B-11 ACTL7B | |
| GH09J107962 | Enhancer | 0.3 | Ensembl dbSUPER | 0.7 | +2.1 | 2074 | 4.8 | RPS15AP27 lnc-KLF4-4 piR-35674-540 LOC105376211 KLF4 lnc-ACTL7B-11 ACTL7B | ||
| GH09J107971 | Enhancer | 0.3 | Ensembl ENCODE | 0.4 | -7.1 | -7132 | 0.8 | RPS15AP27 LOC105376211 lnc-RAD23B-11 KLF4 ACTL7B lnc-ACTL7B-11 |
- Elite GeneHancer and/or Elite GeneHancer-gene association
Download GeneHancer data from 2017 publication |
Request up-to-date GeneHancer data (full dataset)
GeneHancers around RPS15AP27 on the GeneHancer Hub at the UCSC Golden Path
Genomic Locations for RPS15AP27 Gene
Latest Assembly
- chr9:107,963,661-107,964,075
- (GRCh38/hg38)
- Size:
- 415 bases
- Orientation:
- Minus strand
Previous Assembly
- chr9:110,725,942-110,726,356
- (GRCh37/hg19 by Entrez Gene)
- Size:
- 415 bases
- Orientation:
- Minus strand
Genomic View for RPS15AP27 Gene
Genes around RPS15AP27 on UCSC Golden Path with GeneCards custom track
- Cytogenetic band:
-
- 9q31.2 by HGNC
- 9q31.2 by Entrez Gene
- 9q31.2 by Ensembl
RPS15AP27 Gene in genomic location: bands according to
Ensembl, locations according to GeneLoc
(and/or Entrez Gene and/or Ensembl if different)
Genomic Neighborhood
• Exon Structure
• Gene Density
RefSeq DNA sequence for RPS15AP27 Gene
Proteins for RPS15AP27 Gene
Post-translational modifications for RPS15AP27 Gene
No Post-translational modifications
Antibodies for research
Protein products for research
- Search Origene for Purified Proteins, MassSpec and Protein Over-expression Lysates for RPS15AP27
- Origene Custom Protein Services for RPS15AP27
Assay products for research
No data available for DME Specific Peptides for RPS15AP27 Gene
Domains & Families for RPS15AP27 Gene
No data available for Gene Families , Protein Domains , Suggested Antigen Peptide Sequences , Graphical View of Domain Structure and UniProtKB/Swiss-Prot for RPS15AP27 Gene
Function for RPS15AP27 Gene
Phenotypes From GWAS Catalog for RPS15AP27 Gene
Animal Models for research
- Taconic Biosciences: Generate A Custom CRISPR Mouse Model For Your Study
CRISPR products for research
- Applied Biological Materials (abm): CRISPR Clones for RPS15AP27 - Starting at $85 >
- * RPS15AP27 CRISPR as ready-to-use vector or virus: Non-viral | Lenti- | Adeno- | AAV- | siRNA - Browse All
- * Cas9 Nucleases, Nickases, Null Mutants, and GFP tag also available.
- Browse CRISPR knockouts for RPS15AP27
miRNA products for research
Inhibitory RNAs for research
Clone products for research
No data available for Molecular function , Enzyme Numbers (IUBMB) , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for RPS15AP27 Gene
Localization for RPS15AP27 Gene
No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS , Subcellular locations from the Human Protein Atlas (HPA) and Gene Ontology (GO) - Cellular Components for RPS15AP27 Gene
Transcripts for RPS15AP27 Gene
mRNA/cDNA for RPS15AP27 Gene
- 1 Ensembl transcripts including schematic representations, and UCSC links to gene/alias where relevant :
-
- ENST00000449183 343 nts (view in UCSC)
CRISPR products for research
- Applied Biological Materials (abm): CRISPR Clones for RPS15AP27 - Starting at $85 >
- * RPS15AP27 CRISPR as ready-to-use vector or virus: Non-viral | Lenti- | Adeno- | AAV- | siRNA - Browse All
- * Cas9 Nucleases, Nickases, Null Mutants, and GFP tag also available.
- Browse CRISPR knockouts for RPS15AP27
miRNA products for research
Inhibitory RNAs for research
Clone products for research
Relevant External Links for RPS15AP27 Gene
- GeneLoc Exon Structure for
- RPS15AP27
Expression for RPS15AP27 Gene
Primer products for research
No data available for mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , mRNA differential expression in normal tissues , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners , mRNA Expression by UniProt/SwissProt , Evidence on tissue expression from TISSUES and Phenotype-based relationships between genes and organs from Gene ORGANizer for RPS15AP27 Gene
Orthologs for RPS15AP27 Gene
Evolution for RPS15AP27 Gene
- ENSEMBL:
- Gene Tree for RPS15AP27 (if available)
- TreeFam:
- Gene Tree for RPS15AP27 (if available)
- Alliance of Genome Resources:
- Additional Orthologs for RPS15AP27
No data available for Orthologs for RPS15AP27 Gene
Paralogs for RPS15AP27 Gene
No data available for Paralogs for RPS15AP27 Gene
Variants for RPS15AP27 Gene
Additional Variant Information for RPS15AP27 Gene
No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Sequence variations, with clinical significance, from ClinVar and Humsavar, with links to dbSNP , dbSNP identifiers (rs#s) for variants without ClinVar clinical significance , Structural Variations from Database of Genomic Variants (DGV) and Variation tolerance for RPS15AP27 Gene
Disorders for RPS15AP27 Gene
No disorders were found for RPS15AP27 Gene.
No data available for MalaCards , UniProtKB/Swiss-Prot , Genatlas and External Links for RPS15AP27 Gene
Publications for RPS15AP27 Gene
- Comparative analysis of processed ribosomal protein pseudogenes in four mammalian genomes. (PMID: 19123937) Balasubramanian S … Gerstein M (Genome biology 2009) 2 3
- A second-generation genomewide screen for asthma-susceptibility alleles in a founder population. (PMID: 11022011) Ober C … Cox NJ (American journal of human genetics 2000) 40
No data available for Mastermind for RPS15AP27 Gene
Products for RPS15AP27 Gene
- Browse OriGene Antibodies
- Custom Antibody Services
- Browse OriGene ELISA Kits
- Custom Assay Services
- Search Origene for Purified Proteins, MassSpec and Protein Over-expression Lysates for RPS15AP27
- Origene Custom Protein Services for RPS15AP27
- Browse OriGene Inhibitory RNA Products For RPS15AP27
- Browse OriGene qPCR primer pairs and template standards
- Browse CRISPR knockouts for RPS15AP27
- Custom cloning services - gene synthesis, subcloning, mutagenesis, variant library, vector shuttling
- Browse OriGene miRNA Products For RPS15AP27
- Browse Sino Biological cDNA Clones
- Browse Sino Biological Recombinant Proteins
- Browse Sino Biological Cell Lysates
- Browse Sino Biological Antibodies
- Browse Sino Biological Assays
- Browse ELISA Kits
- Browse CRO Services
- High-throughput Antibody Production Service
- Protein Production Service
- Epitope Tag Antibodies & Reporter Protein Antibodies
- Lentiviral ORF Clones
- Browse GeneCopoeia Cell Lines
- Search GeneCopoeia for knockout CRISPR/Cas9 clones, lentivirus, and/or AAV products for RPS15AP27
- Search GeneCopoeia for ORF cDNA, lentivirus, AAV viral particles, and/or promoter clone products for RPS15AP27
- Search GeneCopoeia for miRNA 3'UTR Target clone products for RPS15AP27
- Search GeneCopoeia for shRNA, lentivirus, and/or AAV clone products for RPS15AP27
Sources for RPS15AP27 Gene
- (1) GeneCards
- (2) HGNC
- (3) NCBI Entrez Gene
- (4) UniProtKB/Swiss-Prot
- (5) Ensembl
- (6) OMIM® (Updated: 05-Apr-2021)
- (7) GeneLoc
- (8) Gene Wiki
- (9) UCSC
- (10) PhosphoSitePlus
- (11) Cell Signaling Technology
- (12) GO
- (13) UniProtKB/TrEMBL
- (14) InterPro
- (15) Blocks
- (16) MGI
- (17) IUBMB
- (18) KEGG
- (19) MINT
- (20) STRING
- (21) IntAct
- (22) Novoseek
- (23) PharmGKB
- (24) DrugBank
- (25) HMDB
- (26) ASD
- (27) SAGE
- (28) SOURCE
- (29) HomoloGene
- (30) PanEnsembl
- (31) euGenes
- (32) SGD
- (33) FlyBase
- (34) WormBase
- (35) Pseudogene
- (36) DGV
- (37) dbSNP
- (38) GenAtlas
- (39) HGMD
- (40) GAD
- (41) BGMUT
- (42) HuGE
- (43) Atlas
- (44) GenBank
- (45) HORDE
- (46) HUGE
- (47) IMGT
- (48) Leiden
- (49) miRBase
- (50) DME
- (51) OriGene
- (52) PubMed
- (53) R&D Systems
- (54) Tocris
- (55) Abcam
- (56) Novus Biologicals
- (57) ProSpec
- (58) Sino Biological
- (59) GenScript
- (60) Qiagen
- (61) OCA
- (62) Proteopedia
- (63) MOPED
- (64) neXtProt
- (65) Reactome
- (66) GeneGo (Thomson Reuters)
- (67) DISEASES
- (68) SIMAP
- (69) GenomeRNAi
- (70) LifeMap
- (71) miRTarBase
- (72) MalaCards
- (73) Invitrogen
- (74) BitterDB
- (75) ESI-BIO
- (76) RefSeq
- (77) BioSystems
- (78) MaxQB
- (79) IUPHAR
- (80) BioGPS
- (81) Illumina
- (82) COMPARTMENTS
- (83) HOMER
- (84) PaxDb
- (85) ApexBio
- (86) Addgene
- (87) antibodies-online
- (88) CYP
- (89) NONCODE
- (90) TreeFam
- (91) PathCards
- (92) GeneReviews
- (93) GeneTex
- (94) Taconic Biosciences
- (95) GTEx
- (96) ProteomicsDB
- (97) SCBT
- (98) DGIdb
- (99) ClinicalTrials
- (100) RVIS
- (101) SIGNOR
- (102) diseasecard
- (103) NIH Rare Diseases
- (104) Orphanet
- (105) UMLS
- (106) GTR
- (107) Disease Ontology
- (108) MedlinePlus Genetics
- (109) MeSH
- (110) MedlinePlus
- (111) CDC
- (112) NINDS
- (113) NCBI Bookshelf
- (114) ClinVar
- (115) Gene Damage Index
- (116) HPO
- (117) UDN
- (118) VISTA
- (119) FANTOM5
- (120) ENCODE
- (121) ProSci
- (122) Horizon
- (123) The Signaling Pathways Project (SPP)
- (124) IID
- (125) VectorBuilder
- (126) SNPedia
- (127) BRCA Exchange
- (128) CIViC
- (129) ProteoGenix
- (130) dbSUPER
- (131) TISSUES
- (132) Gene ORGANizer
- (133) abm
- (134) Human Protein Atlas
- (135) GWAS Catalog
- (136) Monarch Initiative
- (137) DataMed
- (138) HumanCyc
- (139) UCNEbase
- (140) EPDnew
- (141) Applied Biosystems
- (142) GlyConnect
- (143) Aminode
- (144) GeneCopoeia
- (145) GPS-Prot
- (146) RNAcentral
- (147) LncRNADisease
- (148) LOVD
- (149) miR2Disease
- (150) DiseaseEnhancer
- (151) Boster Bio
- (152) Biorbyt
- (153) Biocompare
- (154) Mastermind
- (155) CTD^2 Dashboard
- (156) CraniofacialAtlas
- (157) GeneImprint
- (158) Synthego
- (159) ENA
- (160) GtRNAdb
- (161) LncBase
- (162) LncBook
- (163) LNCipedia
- (164) Modomics
- (165) PDBe
- (166) Rfam
- (167) SILVA
- (168) snOPY
- (169) SRPDB
- (170) GENCODE
- (171) TarBase
- (172) Open Targets Platform
- (173) 5SRRNADB
- (174) snoDB
- (175) MirGeneDB
- (176) Alliance of Genome Resources