Aliases for RPS15AP23 Gene

Aliases for RPS15AP23 Gene

  • Ribosomal Protein S15a Pseudogene 23 2 3
  • Ribosomal Protein S15a(RPS15A)Pseudogene 5
  • RPS15A_12_849 3
  • AC083875.1 5

External Ids for RPS15AP23 Gene

Previous GeneCards Identifiers for RPS15AP23 Gene

  • GC07U902614
  • GC07M133000

Summaries for RPS15AP23 Gene

GeneCards Summary for RPS15AP23 Gene

RPS15AP23 (Ribosomal Protein S15a Pseudogene 23) is a Pseudogene.

Additional gene information for RPS15AP23 Gene

No data available for Entrez Gene Summary , CIViC Summary , UniProtKB/Swiss-Prot Summary , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , Rfam classification and piRNA Summary for RPS15AP23 Gene

Genomics for RPS15AP23 Gene

GeneHancer (GH) Regulatory Elements for RPS15AP23 Gene

Promoters and enhancers for RPS15AP23 Gene
GeneHancer (GH) Identifier GH Type GH
Score
GH Sources Gene Association Score Total Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor
Binding Sites
Gene Targets
GH07J133315 Enhancer 0.4 Ensembl 500.7 -0.7 -682 1 JUND ATF2 PRDM6 ATF3 ATF7 RPS15AP23 lnc-CHCHD3-1 EXOC4 piR-48553-300
GH07J133310 Enhancer 0.4 ENCODE 0.7 +4.8 4831 0.2 OSR2 NFIC POLR2A MZF1 NFIB RPS15AP23 lnc-CHCHD3-1 MIR6133 EXOC4
GH07J133301 Enhancer 0.6 Ensembl 0.4 +13.8 13812 1.2 ZIC2 ZNF316 MAFF CTCF MAFK XRCC3 ZNF843 MAFG PRDM6 FEZF1 EXOC4 MIR6133 lnc-CHCHD3-1 RPS15AP23
GH07J133309 Enhancer 0.4 Ensembl 0.4 +5.3 5312 0.6 ZBTB40 OSR2 ZNF600 LRGUK RPS15AP23 lnc-CHCHD3-1 MIR6133 EXOC4
GH07J133300 Enhancer 0.4 Ensembl 0.4 +15.3 15313 0.2 GATA3 SMARCA4 CHD2 GATA2 MIR6133 lnc-CHCHD3-1 RPS15AP23 EXOC4
- Elite GeneHancer and/or Elite GeneHancer-gene association Download GeneHancer data from 2017 publication | Request up-to-date GeneHancer data (full dataset)

GeneHancers around RPS15AP23 on UCSC Golden Path with GeneCards custom track

Genomic Locations for RPS15AP23 Gene

Genomic Locations for RPS15AP23 Gene
chr7:133,315,009-133,315,413
(GRCh38/hg38)
Size:
405 bases
Orientation:
Minus strand
chr7:132,999,763-133,000,167
(GRCh37/hg19)
Size:
405 bases
Orientation:
Minus strand

Genomic View for RPS15AP23 Gene

Genes around RPS15AP23 on UCSC Golden Path with GeneCards custom track

Cytogenetic band:
RPS15AP23 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for RPS15AP23 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

RefSeq DNA sequence for RPS15AP23 Gene

Proteins for RPS15AP23 Gene

Post-translational modifications for RPS15AP23 Gene

No Post-translational modifications

No data available for DME Specific Peptides for RPS15AP23 Gene

Domains & Families for RPS15AP23 Gene

No data available for Gene Families , Protein Domains , Suggested Antigen Peptide Sequences , Graphical View of Domain Structure and UniProtKB/Swiss-Prot for RPS15AP23 Gene

Function for RPS15AP23 Gene

Animal Model Products

CRISPR Products

No data available for Molecular function , Enzyme Numbers (IUBMB) , Phenotypes From GWAS Catalog , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for RPS15AP23 Gene

Localization for RPS15AP23 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS , Subcellular locations from the Human Protein Atlas (HPA) and Gene Ontology (GO) - Cellular Components for RPS15AP23 Gene

Pathways & Interactions for RPS15AP23 Gene

PathCards logo

SuperPathways for RPS15AP23 Gene

No Data Available
;

Gene Ontology (GO) - Biological Process for RPS15AP23 Gene

None

No data available for Pathways by source , Interacting Proteins and SIGNOR curated interactions for RPS15AP23 Gene

Drugs & Compounds for RPS15AP23 Gene

No Compound Related Data Available

Transcripts for RPS15AP23 Gene

mRNA/cDNA for RPS15AP23 Gene

1 Ensembl transcripts including schematic representations, and UCSC links to gene/alias where relevant :

CRISPR Products

Alternative Splicing Database (ASD) splice patterns (SP) for RPS15AP23 Gene

No ASD Table

Relevant External Links for RPS15AP23 Gene

GeneLoc Exon Structure for
RPS15AP23

Expression for RPS15AP23 Gene

mRNA expression in normal human tissues from GTEx, Illumina, BioGPS, and SAGE for RPS15AP23 Gene

genes like me logo Genes that share expression patterns with RPS15AP23: view

No data available for mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , mRNA differential expression in normal tissues , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners , mRNA Expression by UniProt/SwissProt , Evidence on tissue expression from TISSUES and Phenotype-based relationships between genes and organs from Gene ORGANizer for RPS15AP23 Gene

Orthologs for RPS15AP23 Gene

Evolution for RPS15AP23 Gene

ENSEMBL:
Gene Tree for RPS15AP23 (if available)
TreeFam:
Gene Tree for RPS15AP23 (if available)

No data available for Orthologs for RPS15AP23 Gene

Paralogs for RPS15AP23 Gene

No data available for Paralogs for RPS15AP23 Gene

Variants for RPS15AP23 Gene

Additional Variant Information for RPS15AP23 Gene

SNPedia medical, phenotypic, and genealogical associations of SNPs for
RPS15AP23

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Sequence variations, with clinical significance, from ClinVar and Humsavar, with links to dbSNP , Additional dbSNP identifiers (rs#s) , Structural Variations from Database of Genomic Variants (DGV) and Variation tolerance for RPS15AP23 Gene

Disorders for RPS15AP23 Gene

No disorders were found for RPS15AP23 Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot , Genatlas and External Links for RPS15AP23 Gene

Publications for RPS15AP23 Gene

  1. Comparative analysis of processed ribosomal protein pseudogenes in four mammalian genomes. (PMID: 19123937) Balasubramanian S … Gerstein M (Genome biology 2009) 2 3 54

No data available for Mastermind for RPS15AP23 Gene

Products for RPS15AP23 Gene

Sources for RPS15AP23 Gene