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Aliases for RPS15AP20 Gene
Aliases for RPS15AP20 Gene
External Ids for RPS15AP20 Gene
- HGNC: 36391
- Entrez Gene: 647155
- Ensembl: ENSG00000214641
Previous GeneCards Identifiers for RPS15AP20 Gene
- GC06M051510
- GC06M051402
Summaries for RPS15AP20 Gene
GeneCards Summary for RPS15AP20 Gene
RPS15AP20 (Ribosomal Protein S15a Pseudogene 20) is a Pseudogene.
Additional gene information for RPS15AP20 Gene
No data available for Entrez Gene Summary , CIViC Summary , UniProtKB/Swiss-Prot Summary , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , Rfam classification and piRNA Summary for RPS15AP20 Gene
Genomics for RPS15AP20 Gene
GeneHancer (GH) Regulatory Elements Pubs
Promoters and enhancers for RPS15AP20 Gene
| GeneHancer (GH) Identifier | GH Type | GH Score |
GH Sources | Gene Association Score | Total Score | TSS distance (kb) | Number of Genes Away | Size (kb) | Transcription Factor Binding Sites |
Gene Targets |
|---|---|---|---|---|---|---|---|---|---|---|
| GH06J051514 | Enhancer | 0.9 | Ensembl ENCODE CraniofacialAtlas | 0.4 | +23.2 | 23165 | 1.6 | CREB1 ATF7 RAD21 CTCF SMC3 ATF4 GLIS1 ATF2 JUND JUN | ENSG00000228689 RPS15AP20 piR-40110-594 PKHD1 TFAP2B | |
| GH06J051554 | Enhancer | 0.6 | Ensembl | 0.4 | -16.7 | -16726 | 0.2 | CREB1 ATF7 TCF7L2 JUND ATF2 WT1 KLF8 RCOR1 ATF3 CHD2 | RPS15AP20 piR-57133-518 PKHD1 TFAP2B | |
| GH06J051494 | Enhancer | 0.5 | Ensembl | 0.3 | +42.1 | 42074 | 2.6 | CTCF FOXA1 USF1 GATA3 POLR2A JUND SMARCA4 USF2 SPI1 | ENSG00000212532 ENSG00000228689 piR-40110-594 RPS15AP20 TFAP2B PKHD1 | |
| GH06J051542 | Enhancer | 0.3 | Ensembl | 0.4 | -5.0 | -5026 | 0.4 | CTCF | ENSG00000228689 RPS15AP20 piR-57133-518 PKHD1 TFAP2B | |
| GH06J051540 | Enhancer | 0.2 | Ensembl | 0.7 | -2.7 | -2726 | 0.2 | ENSG00000228689 RPS15AP20 piR-57133-518 PKHD1 TFAP2B |
- Elite GeneHancer and/or Elite GeneHancer-gene association
Download GeneHancer data from 2017 publication |
Request up-to-date GeneHancer data (full dataset)
GeneHancers around RPS15AP20 on the GeneHancer Hub at the UCSC Golden Path
Genomic Locations for RPS15AP20 Gene
Genomic Locations for RPS15AP20 Gene
- chr6:51,537,130-51,537,575
- (GRCh38/hg38)
- Size:
- 446 bases
- Orientation:
- Minus strand
- chr6:51,401,929-51,402,373
- (GRCh37/hg19)
- Size:
- 445 bases
- Orientation:
- Minus strand
Genomic View for RPS15AP20 Gene
Genes around RPS15AP20 on UCSC Golden Path with GeneCards custom track
- Cytogenetic band:
-
- 6p12.2 by HGNC
- 6p12.3 by Entrez Gene
- 6p12.3 by Ensembl
RPS15AP20 Gene in genomic location: bands according to
Ensembl, locations according to GeneLoc
(and/or Entrez Gene and/or Ensembl if different)
Genomic Neighborhood
• Exon Structure
• Gene Density
RefSeq DNA sequence for RPS15AP20 Gene
Proteins for RPS15AP20 Gene
Post-translational modifications for RPS15AP20 Gene
No Post-translational modifications
Antibody Products
Protein Products
- Search Origene for Purified Proteins, MassSpec and Protein Over-expression Lysates for RPS15AP20
- Origene Custom Protein Services for RPS15AP20
No data available for DME Specific Peptides for RPS15AP20 Gene
Domains & Families for RPS15AP20 Gene
No data available for Gene Families , Protein Domains , Suggested Antigen Peptide Sequences , Graphical View of Domain Structure and UniProtKB/Swiss-Prot for RPS15AP20 Gene
Function for RPS15AP20 Gene
Phenotypes From GWAS Catalog for RPS15AP20 Gene
Animal Model Products
- Taconic Biosciences: Generate A Custom CRISPR Mouse Model For Your Study
CRISPR Products
- Applied Biological Materials (abm): CRISPR Clones for RPS15AP20 - Select products 50% OFF >
- * RPS15AP20 CRISPR as ready-to-use vector or virus: ORF | Lenti- | Adeno- | AAV- | Protein Vector - Browse All
- * Gene synthesis, site-directed mutagenesis, subcloning, and more services - Browse All
- Browse CRISPR knockouts for RPS15AP20
miRNA Products
Inhibitory RNA Products
Clone Products
No data available for Molecular function , Enzyme Numbers (IUBMB) , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for RPS15AP20 Gene
Localization for RPS15AP20 Gene
No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS , Subcellular locations from the Human Protein Atlas (HPA) and Gene Ontology (GO) - Cellular Components for RPS15AP20 Gene
Transcripts for RPS15AP20 Gene
mRNA/cDNA for RPS15AP20 Gene
- 1 Ensembl transcripts including schematic representations, and UCSC links to gene/alias where relevant :
-
- ENST00000398713 389 nts (view in UCSC)
CRISPR Products
- Applied Biological Materials (abm): CRISPR Clones for RPS15AP20 - Select products 50% OFF >
- * RPS15AP20 CRISPR as ready-to-use vector or virus: ORF | Lenti- | Adeno- | AAV- | Protein Vector - Browse All
- * Gene synthesis, site-directed mutagenesis, subcloning, and more services - Browse All
- Browse CRISPR knockouts for RPS15AP20
miRNA Products
Inhibitory RNA Products
Clone Products
Relevant External Links for RPS15AP20 Gene
- GeneLoc Exon Structure for
- RPS15AP20
Expression for RPS15AP20 Gene
Primer Products
No data available for mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , mRNA differential expression in normal tissues , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners , mRNA Expression by UniProt/SwissProt , Evidence on tissue expression from TISSUES and Phenotype-based relationships between genes and organs from Gene ORGANizer for RPS15AP20 Gene
Orthologs for RPS15AP20 Gene
No data available for Orthologs for RPS15AP20 Gene
Paralogs for RPS15AP20 Gene
No data available for Paralogs for RPS15AP20 Gene
Variants for RPS15AP20 Gene
Additional Variant Information for RPS15AP20 Gene
- SNPedia medical, phenotypic, and genealogical associations of SNPs for
- RPS15AP20
No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Sequence variations, with clinical significance, from ClinVar and Humsavar, with links to dbSNP , Additional dbSNP identifiers (rs#s) , Structural Variations from Database of Genomic Variants (DGV) and Variation tolerance for RPS15AP20 Gene
Disorders for RPS15AP20 Gene
No disorders were found for RPS15AP20 Gene.
No data available for MalaCards , UniProtKB/Swiss-Prot , Genatlas and External Links for RPS15AP20 Gene
Publications for RPS15AP20 Gene
- Comparative analysis of processed ribosomal protein pseudogenes in four mammalian genomes. (PMID: 19123937) Balasubramanian S … Gerstein M (Genome biology 2009) 2 3
No data available for Mastermind for RPS15AP20 Gene
Products for RPS15AP20 Gene
- Browse OriGene Antibodies
- Custom Antibody Services
- Browse OriGene ELISA Kits
- Custom Assay Services
- Search Origene for Purified Proteins, MassSpec and Protein Over-expression Lysates for RPS15AP20
- Origene Custom Protein Services for RPS15AP20
- Browse OriGene Inhibitory RNA Products For RPS15AP20
- Browse OriGene qPCR primer pairs and template standards
- Browse CRISPR knockouts for RPS15AP20
- Custom cloning services - gene synthesis, subcloning, mutagenesis, variant library, vector shuttling
- Browse OriGene miRNA Products For RPS15AP20
- Browse Sino Biological cDNA Clones
- Browse Sino Biological Recombinant Proteins
- Browse Sino Biological Cell Lysates
- Browse Sino Biological Antibodies
- Browse Sino Biological Assays
- Browse ELISA Kits
- Browse CRO Services
- High-throughput Antibody Production Service
- Protein Production Service
- Epitope Tag Antibodies & Reporter Protein Antibodies
- Lentiviral ORF Clones
- Browse GeneCopoeia Cell Lines
- Search GeneCopoeia for knockout CRISPR/Cas9 clones, lentivirus, and/or AAV products for RPS15AP20
- Search GeneCopoeia for ORF cDNA, lentivirus, AAV viral particles, and/or promoter clone products for RPS15AP20
- Search GeneCopoeia for miRNA 3'UTR Target clone products for RPS15AP20
- Search GeneCopoeia for shRNA, lentivirus, and/or AAV clone products for RPS15AP20
Sources for RPS15AP20 Gene
- (1) GeneCards
- (2) HGNC
- (3) NCBI Entrez Gene
- (4) UniProtKB/Swiss-Prot
- (5) Ensembl
- (6) OMIM
- (7) GeneLoc
- (8) Gene Wiki
- (9) UCSC
- (10) PhosphoSitePlus
- (11) Cell Signaling Technology
- (12) GO
- (13) UniProtKB/TrEMBL
- (14) InterPro
- (15) ProtoNet
- (16) Blocks
- (17) MGI
- (18) IUBMB
- (19) KEGG
- (20) MINT
- (21) STRING
- (22) IntAct
- (23) Novoseek
- (24) PharmGKB
- (25) DrugBank
- (26) HMDB
- (27) ASD
- (28) SAGE
- (29) SOURCE
- (30) HomoloGene
- (31) PanEnsembl
- (32) euGenes
- (33) SGD
- (34) FlyBase
- (35) WormBase
- (36) Pseudogene
- (37) DGV
- (38) dbSNP
- (39) GenAtlas
- (40) HGMD
- (41) GAD
- (42) BGMUT
- (43) HuGE
- (44) Atlas
- (45) GenBank
- (46) HORDE
- (47) HUGE
- (48) IMGT
- (49) Leiden
- (50) miRBase
- (51) DME
- (52) OriGene
- (53) PubMed
- (54) R&D Systems
- (55) TGDB
- (56) Tocris
- (57) Abcam
- (58) Novus Biologicals
- (59) ProSpec
- (60) Sino Biological
- (61) GenScript
- (62) Qiagen
- (63) OCA
- (64) Proteopedia
- (65) MOPED
- (66) neXtProt
- (67) Reactome
- (68) GeneGo (Thomson Reuters)
- (69) DISEASES
- (70) SIMAP
- (71) GenomeRNAi
- (72) LifeMap
- (73) miRTarBase
- (74) MalaCards
- (75) Invitrogen
- (76) BitterDB
- (77) ESI-BIO
- (78) RefSeq
- (79) BioSystems
- (80) MaxQB
- (81) IUPHAR
- (82) BioGPS
- (83) Illumina
- (84) COMPARTMENTS
- (85) HOMER
- (86) PaxDb
- (87) ApexBio
- (88) Addgene
- (89) antibodies-online
- (90) CYP
- (91) NONCODE
- (92) TreeFam
- (93) PathCards
- (94) GeneReviews
- (95) GeneTex
- (96) Taconic Biosciences
- (97) GTEx
- (98) ProteomicsDB
- (99) SCBT
- (100) DGIdb
- (101) ClinicalTrials
- (102) RVIS
- (103) SIGNOR
- (104) diseasecard
- (105) NIH Rare Diseases
- (106) Orphanet
- (107) UMLS
- (108) GTR
- (109) Disease Ontology
- (110) Genetics Home Reference
- (111) MeSH
- (112) MedlinePlus
- (113) CDC
- (114) NINDS
- (115) NCBI Bookshelf
- (116) ClinVar
- (117) Gene Damage Index
- (118) HPO
- (119) UDN
- (120) VISTA
- (121) FANTOM5
- (122) ENCODE
- (123) ProSci
- (124) Horizon
- (125) The Signaling Pathways Project (SPP)
- (126) IID
- (127) VectorBuilder
- (128) SNPedia
- (129) BRCA Exchange
- (130) CIViC
- (131) ProteoGenix
- (132) dbSUPER
- (133) TISSUES
- (134) Gene ORGANizer
- (135) abm
- (136) Human Protein Atlas
- (137) GWAS Catalog
- (138) Monarch Initiative
- (139) DataMed
- (140) HumanCyc
- (141) UCNEbase
- (142) EPDnew
- (143) Applied Biosystems
- (144) GlyConnect
- (145) Aminode
- (146) GeneCopoeia
- (147) GPS-Prot
- (148) RNACentral
- (149) LncRNADisease
- (150) LOVD
- (151) miR2Disease
- (152) DiseaseEnhancer
- (153) Boster Bio
- (154) Biorbyt
- (155) Biocompare
- (156) Mastermind
- (157) CTD^2 Dashboard
- (158) CraniofacialAtlas
- (159) GeneImprint
- (160) Synthego
- (161) ENA
- (162) GtRNAdb
- (163) LncBase
- (164) LncBook
- (165) LNCipedia
- (166) Modomics
- (167) PDBe
- (168) Rfam
- (169) SILVA
- (170) snOPY
- (171) SRPDB
- (172) GENCODE
- (173) TarBase
- (174) Signalway Antibody
- (175) Open Targets Platform
- (176) 5SRRNADB
- (177) snoDB
- (178) MirGeneDB