Aliases for RPS15AP15 Gene

Aliases for RPS15AP15 Gene

  • Ribosomal Protein S15a Pseudogene 15 2 3
  • Ribosomal Protein S15a (RPS15A) Pseudogene 5
  • RPS15A_6_237 3
  • AC007389.2 5

External Ids for RPS15AP15 Gene

Previous GeneCards Identifiers for RPS15AP15 Gene

  • GC02M065593
  • GC02M065739

Summaries for RPS15AP15 Gene

GeneCards Summary for RPS15AP15 Gene

RPS15AP15 (Ribosomal Protein S15a Pseudogene 15) is a Pseudogene.

Additional gene information for RPS15AP15 Gene

No data available for Entrez Gene Summary , CIViC Summary , UniProtKB/Swiss-Prot Summary , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , Rfam classification and piRNA Summary for RPS15AP15 Gene

Genomics for RPS15AP15 Gene

GeneHancer (GH) Regulatory Elements Pubs

Promoters and enhancers for RPS15AP15 Gene
GeneHancer (GH) Identifier GH Type GH
Score
GH Sources Gene Association Score Total Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor
Binding Sites
Gene Targets
GH02J065516 Enhancer 0.7 Ensembl 0.7 -4.8 -4822 0.6 JUND DPF2 MGA CBX3 HMBOX1 POLR2A RUNX3 FOSL1 JUNB NR2F1 LOC105374781 RPS15AP15 SPRED2 ENSG00000204929 MEIS1
GH02J065514 Enhancer 0.5 Ensembl 0.7 -2.7 -2655 1.2 RUNX3 JUNB SPI1 IRF4 BATF ATF2 IKZF1 TCF7 ZBED1 RPS15AP15 LOC105374781 ENSG00000204929 SPRED2 MEIS1
GH02J065517 Enhancer 0.2 Ensembl 0.4 -5.6 -5555 0.2 LOC105374781 RPS15AP15 ENSG00000204929 SPRED2 MEIS1
- Elite GeneHancer and/or Elite GeneHancer-gene association Download GeneHancer data from 2017 publication | Request up-to-date GeneHancer data (full dataset)

GeneHancers around RPS15AP15 on the GeneHancer Hub at the UCSC Golden Path

Genomic Locations for RPS15AP15 Gene

Genomic Locations for RPS15AP15 Gene
chr2:65,511,768-65,512,146
(GRCh38/hg38)
Size:
379 bases
Orientation:
Minus strand
chr2:65,738,902-65,739,280
(GRCh37/hg19)
Size:
379 bases
Orientation:
Minus strand

Genomic View for RPS15AP15 Gene

Genes around RPS15AP15 on UCSC Golden Path with GeneCards custom track

Cytogenetic band:
RPS15AP15 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for RPS15AP15 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

RefSeq DNA sequence for RPS15AP15 Gene

Proteins for RPS15AP15 Gene

Post-translational modifications for RPS15AP15 Gene

No Post-translational modifications

No data available for DME Specific Peptides for RPS15AP15 Gene

Domains & Families for RPS15AP15 Gene

No data available for Gene Families , Protein Domains , Suggested Antigen Peptide Sequences , Graphical View of Domain Structure and UniProtKB/Swiss-Prot for RPS15AP15 Gene

Function for RPS15AP15 Gene

Animal Model Products

CRISPR Products

No data available for Molecular function , Enzyme Numbers (IUBMB) , Phenotypes From GWAS Catalog , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for RPS15AP15 Gene

Localization for RPS15AP15 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS , Subcellular locations from the Human Protein Atlas (HPA) and Gene Ontology (GO) - Cellular Components for RPS15AP15 Gene

Pathways & Interactions for RPS15AP15 Gene

PathCards logo

SuperPathways for RPS15AP15 Gene

No Data Available

Gene Ontology (GO) - Biological Process for RPS15AP15 Gene

None

No data available for Pathways by source , Interacting Proteins and SIGNOR curated interactions for RPS15AP15 Gene

Drugs & Compounds for RPS15AP15 Gene

No Compound Related Data Available

Transcripts for RPS15AP15 Gene

mRNA/cDNA for RPS15AP15 Gene

1 Ensembl transcripts including schematic representations, and UCSC links to gene/alias where relevant :

Alternative Splicing Database (ASD) splice patterns (SP) for RPS15AP15 Gene

No ASD Table

Relevant External Links for RPS15AP15 Gene

GeneLoc Exon Structure for
RPS15AP15

Expression for RPS15AP15 Gene

mRNA expression in normal human tissues from GTEx, Illumina, BioGPS, and SAGE for RPS15AP15 Gene

genes like me logo Genes that share expression patterns with RPS15AP15: view

No data available for mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , mRNA differential expression in normal tissues , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners , mRNA Expression by UniProt/SwissProt , Evidence on tissue expression from TISSUES and Phenotype-based relationships between genes and organs from Gene ORGANizer for RPS15AP15 Gene

Orthologs for RPS15AP15 Gene

Evolution for RPS15AP15 Gene

ENSEMBL:
Gene Tree for RPS15AP15 (if available)
TreeFam:
Gene Tree for RPS15AP15 (if available)

No data available for Orthologs for RPS15AP15 Gene

Paralogs for RPS15AP15 Gene

No data available for Paralogs for RPS15AP15 Gene

Variants for RPS15AP15 Gene

Additional Variant Information for RPS15AP15 Gene

SNPedia medical, phenotypic, and genealogical associations of SNPs for
RPS15AP15

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Sequence variations, with clinical significance, from ClinVar and Humsavar, with links to dbSNP , Additional dbSNP identifiers (rs#s) , Structural Variations from Database of Genomic Variants (DGV) and Variation tolerance for RPS15AP15 Gene

Disorders for RPS15AP15 Gene

Additional Disease Information for RPS15AP15

Genetic Association Database
(GAD)

No disorders were found for RPS15AP15 Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot and Genatlas for RPS15AP15 Gene

Publications for RPS15AP15 Gene

  1. Comparative analysis of processed ribosomal protein pseudogenes in four mammalian genomes. (PMID: 19123937) Balasubramanian S … Gerstein M (Genome biology 2009) 2 3
  2. Large-scale genome-wide association analysis of bipolar disorder identifies a new susceptibility locus near ODZ4. (PMID: 21926972) Psychiatric GWAS Consortium Bipolar Disorder Working Group (Nature genetics 2011) 41
  3. Variants in TF and HFE explain approximately 40% of genetic variation in serum-transferrin levels. (PMID: 19084217) Benyamin B … Visscher PM (American journal of human genetics 2009) 41

No data available for Mastermind for RPS15AP15 Gene

Products for RPS15AP15 Gene

Sources for RPS15AP15 Gene