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Aliases for RPS13P4 Gene

Aliases for RPS13P4 Gene

  • Ribosomal Protein S13 Pseudogene 4 2 3
  • RPS13_2_199 3
  • AC066692.1 5

External Ids for RPS13P4 Gene

Previous GeneCards Identifiers for RPS13P4 Gene

  • GC02U901623
  • GC02P024127

Summaries for RPS13P4 Gene

GeneCards Summary for RPS13P4 Gene

RPS13P4 (Ribosomal Protein S13 Pseudogene 4) is a Pseudogene.

Additional gene information for RPS13P4 Gene

No data available for Entrez Gene Summary , CIViC summary , UniProtKB/Swiss-Prot , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , fRNAdb sequence ontologies and piRNA Summary for RPS13P4 Gene

Genomics for RPS13P4 Gene

GeneHancer (GH) Regulatory Elements for RPS13P4 Gene

Promoters and enhancers for RPS13P4 Gene
GeneHancer (GH) Identifier GH Type GH
Score
GH Sources Gene Association Score Total Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor
Binding Sites
Gene Targets
GH02I023900 Enhancer 1 Ensembl ENCODE 550.8 +0.8 793 2.8 PKNOX1 NFIB RFX5 ZNF335 SMARCC2 FOS SMARCC1 CEBPB NFIL3 ATF4 RPS13P4 UBXN2A ATAD2B FAM228B SF3B6 PFN4 GC02P023754
GH02I023924 Promoter/Enhancer 2.1 EPDnew Ensembl ENCODE 0.3 +25.9 25872 3.7 HDGF PKNOX1 SMAD1 ARNT ZFP64 ARID4B SIN3A FEZF1 DMAP1 ZNF2 UBXN2A ATAD2B FAM228B MFSD2B SF3B6 FKBP1B PFN4 RPS13P4 GC02P023754
GH02I023891 Enhancer 1 Ensembl ENCODE 0.4 -8.6 -8612 1.1 PKNOX1 SMAD1 RB1 BMI1 BATF IRF4 ATF7 ETV6 IKZF2 RUNX3 UBXN2A PFN4 RPS13P4 PGAM1P6 ATAD2B GC02P023754
GH02I023905 Enhancer 0.5 Ensembl 0.8 +4.7 4708 0.4 TCF12 NCOR1 TAL1 CBFA2T3 DPF2 ZBTB17 ATAD2B UBXN2A RPS13P4 GC02P023754
GH02I023916 Enhancer 0.9 Ensembl ENCODE 0.4 +16.2 16226 0.8 SMARCE1 LEF1 FOXA2 ETV1 ZBTB8A DPF2 ELF1 PPARG ZNF592 ZNF335 UBXN2A ATAD2B RPS13P4 GC02P023754
- Elite GeneHancer and/or Elite GeneHancer-gene association Download GeneHancer data dump

GeneHancers around RPS13P4 on UCSC Golden Path with GeneCards custom track

Genomic Locations for RPS13P4 Gene

Genomic Locations for RPS13P4 Gene
chr2:23,900,693-23,901,149
(GRCh38/hg38)
Size:
457 bases
Orientation:
Plus strand
chr2:24,123,563-24,124,019
(GRCh37/hg19)

Genomic View for RPS13P4 Gene

Genes around RPS13P4 on UCSC Golden Path with GeneCards custom track

Cytogenetic band:
RPS13P4 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for RPS13P4 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

RefSeq DNA sequence for RPS13P4 Gene

Proteins for RPS13P4 Gene

Post-translational modifications for RPS13P4 Gene

No Post-translational modifications

No data available for DME Specific Peptides for RPS13P4 Gene

Domains & Families for RPS13P4 Gene

Graphical View of Domain Structure for InterPro Entry

No data available for Gene Families , Protein Domains , Suggested Antigen Peptide Sequences and UniProtKB/Swiss-Prot for RPS13P4 Gene

Function for RPS13P4 Gene

Animal Model Products

Clone Products

No data available for Molecular function , Enzyme Numbers (IUBMB) , Phenotypes From GWAS Catalog , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for RPS13P4 Gene

Localization for RPS13P4 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS , Subcellular locations from the Human Protein Atlas (HPA) and Gene Ontology (GO) - Cellular Components for RPS13P4 Gene

Pathways & Interactions for RPS13P4 Gene

SuperPathways for RPS13P4 Gene

No Data Available

Interacting Proteins for RPS13P4 Gene

Gene Ontology (GO) - Biological Process for RPS13P4 Gene

None

No data available for Pathways by source and SIGNOR curated interactions for RPS13P4 Gene

Drugs & Compounds for RPS13P4 Gene

No Compound Related Data Available

Transcripts for RPS13P4 Gene

mRNA/cDNA for RPS13P4 Gene

(1) Ensembl transcripts including schematic representations, and UCSC links where relevant :

Clone Products

Alternative Splicing Database (ASD) splice patterns (SP) for RPS13P4 Gene

No ASD Table

Relevant External Links for RPS13P4 Gene

GeneLoc Exon Structure for
RPS13P4
ECgene alternative splicing isoforms for
RPS13P4

Expression for RPS13P4 Gene

mRNA expression in normal human tissues from GTEx, Illumina, BioGPS, and CGAP SAGE for RPS13P4 Gene

NURSA nuclear receptor signaling pathways regulating expression of RPS13P4 Gene:

RPS13P4
genes like me logo Genes that share expression patterns with RPS13P4: view

No data available for mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , mRNA differential expression in normal tissues , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners , mRNA Expression by UniProt/SwissProt , Evidence on tissue expression from TISSUES and Phenotype-based relationships between genes and organs from Gene ORGANizer for RPS13P4 Gene

Orthologs for RPS13P4 Gene

Evolution for RPS13P4 Gene

ENSEMBL:
Gene Tree for RPS13P4 (if available)
TreeFam:
Gene Tree for RPS13P4 (if available)

No data available for Orthologs for RPS13P4 Gene

Paralogs for RPS13P4 Gene

No data available for Paralogs for RPS13P4 Gene

Variants for RPS13P4 Gene

Additional Variant Information for RPS13P4 Gene

SNPedia medical, phenotypic, and genealogical associations of SNPs for
RPS13P4

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Sequence variations from dbSNP and Humsavar , Structural Variations from Database of Genomic Variants (DGV) and Variation tolerance for RPS13P4 Gene

Disorders for RPS13P4 Gene

No disorders were found for RPS13P4 Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot , Genatlas and External Links for RPS13P4 Gene

Publications for RPS13P4 Gene

  1. Comparative analysis of processed ribosomal protein pseudogenes in four mammalian genomes. (PMID: 19123937) Balasubramanian S … Gerstein M (Genome biology 2009) 2 3 58

Products for RPS13P4 Gene

Sources for RPS13P4 Gene

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