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Aliases for RPS13P1 Gene

Subcategory (RNA class) for RPS13P1 Gene


Aliases for RPS13P1 Gene

  • Ribosomal Protein S13 Pseudogene 1 2 3
  • RPS13_1_111 3
  • AL451074.4 5

External Ids for RPS13P1 Gene

ORGUL Members for RPS13P1 Gene

Previous GeneCards Identifiers for RPS13P1 Gene

  • GC01P163909

Summaries for RPS13P1 Gene

GeneCards Summary for RPS13P1 Gene

RPS13P1 (Ribosomal Protein S13 Pseudogene 1) is a Pseudogene, and is affiliated with the antisense RNA class.

Additional gene information for RPS13P1 Gene

No data available for Entrez Gene Summary , CIViC summary , UniProtKB/Swiss-Prot , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , fRNAdb sequence ontologies and piRNA Summary for RPS13P1 Gene

Genomics for RPS13P1 Gene

GeneHancer (GH) Regulatory Elements for RPS13P1 Gene

Promoters and enhancers for RPS13P1 Gene
GeneHancer (GH) Identifier GH Type GH
GH Sources Gene Association Score Total Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor
Binding Sites
Gene Targets
GH01I165670 Enhancer 0.2 Ensembl 550.8 +0.2 158 1.2 RPS13P1 MGST3 RPL21P27 ALDH9A1
GH01I165852 Enhancer 1.7 FANTOM5 Ensembl ENCODE dbSUPER 12.1 +185.3 185329 7.7 HDGF PKNOX1 FOXA2 ZFP64 ARID4B SIN3A DMAP1 ZNF766 ZNF213 FOS LOC284685 UCK2 ENSG00000236364 RPS13P1 TMCO1 LOC100147773 LOC105371586
GH01I165666 Enhancer 0.4 Ensembl 0.8 -4.7 -4655 0.4 MEF2D CEBPG ALDH9A1 RPS13P1 GC01M165662 ENSG00000206990
- Elite GeneHancer and/or Elite GeneHancer-gene association Download GeneHancer data dump

GeneHancers around RPS13P1 on UCSC Golden Path with GeneCards custom track

Genomic Locations for RPS13P1 Gene

Genomic Locations for RPS13P1 Gene
476 bases
Plus strand

Genomic View for RPS13P1 Gene

Genes around RPS13P1 on UCSC Golden Path with GeneCards custom track

Cytogenetic band:
RPS13P1 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for RPS13P1 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

RefSeq DNA sequence for RPS13P1 Gene

Proteins for RPS13P1 Gene

Post-translational modifications for RPS13P1 Gene

No Post-translational modifications

No data available for DME Specific Peptides for RPS13P1 Gene

Domains & Families for RPS13P1 Gene

Graphical View of Domain Structure for InterPro Entry

No data available for Gene Families , Protein Domains , Suggested Antigen Peptide Sequences and UniProtKB/Swiss-Prot for RPS13P1 Gene

Function for RPS13P1 Gene

Animal Model Products

Clone Products

No data available for Molecular function , Enzyme Numbers (IUBMB) , Phenotypes From GWAS Catalog , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for RPS13P1 Gene

Localization for RPS13P1 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS , Subcellular locations from the Human Protein Atlas (HPA) and Gene Ontology (GO) - Cellular Components for RPS13P1 Gene

Pathways & Interactions for RPS13P1 Gene

SuperPathways for RPS13P1 Gene

No Data Available

Interacting Proteins for RPS13P1 Gene

Gene Ontology (GO) - Biological Process for RPS13P1 Gene


No data available for Pathways by source and SIGNOR curated interactions for RPS13P1 Gene

Drugs & Compounds for RPS13P1 Gene

No Compound Related Data Available

Transcripts for RPS13P1 Gene

mRNA/cDNA for RPS13P1 Gene

(1) Ensembl transcripts including schematic representations, and UCSC links where relevant :

Clone Products

Alternative Splicing Database (ASD) splice patterns (SP) for RPS13P1 Gene

No ASD Table

Relevant External Links for RPS13P1 Gene

GeneLoc Exon Structure for
ECgene alternative splicing isoforms for

Expression for RPS13P1 Gene

mRNA expression in normal human tissues from GTEx, Illumina, BioGPS, and CGAP SAGE for RPS13P1 Gene

mRNA differential expression in normal tissues according to GTEx for RPS13P1 Gene

This gene is overexpressed in Brain - Cerebellar Hemisphere (x4.5) and Brain - Cerebellum (x4.3).

NURSA nuclear receptor signaling pathways regulating expression of RPS13P1 Gene:

genes like me logo Genes that share expression patterns with RPS13P1: view

No data available for mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners , mRNA Expression by UniProt/SwissProt , Evidence on tissue expression from TISSUES and Phenotype-based relationships between genes and organs from Gene ORGANizer for RPS13P1 Gene

Orthologs for RPS13P1 Gene

Evolution for RPS13P1 Gene

Gene Tree for RPS13P1 (if available)
Gene Tree for RPS13P1 (if available)

No data available for Orthologs for RPS13P1 Gene

Paralogs for RPS13P1 Gene

No data available for Paralogs for RPS13P1 Gene

Variants for RPS13P1 Gene

Additional Variant Information for RPS13P1 Gene

SNPedia medical, phenotypic, and genealogical associations of SNPs for

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Sequence variations from dbSNP and Humsavar , Structural Variations from Database of Genomic Variants (DGV) and Variation tolerance for RPS13P1 Gene

Disorders for RPS13P1 Gene

No disorders were found for RPS13P1 Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot , Genatlas and External Links for RPS13P1 Gene

Publications for RPS13P1 Gene

  1. Comparative analysis of processed ribosomal protein pseudogenes in four mammalian genomes. (PMID: 19123937) Balasubramanian S … Gerstein M (Genome biology 2009) 2 3 58

Products for RPS13P1 Gene

Sources for RPS13P1 Gene

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