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Aliases for RPS12P13 Gene

Subcategory (RNA class) for RPS12P13 Gene

antisense

Aliases for RPS12P13 Gene

  • Ribosomal Protein S12 Pseudogene 13 2 3
  • RPS12_5_735 3
  • AL445189.1 5

External Ids for RPS12P13 Gene

ORGUL Members for RPS12P13 Gene

Previous GeneCards Identifiers for RPS12P13 Gene

  • GC06U901622
  • GC06M109178

Summaries for RPS12P13 Gene

GeneCards Summary for RPS12P13 Gene

RPS12P13 (Ribosomal Protein S12 Pseudogene 13) is a Pseudogene, and is affiliated with the antisense RNA class.

Additional gene information for RPS12P13 Gene

No data available for Entrez Gene Summary , CIViC summary , UniProtKB/Swiss-Prot , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , fRNAdb sequence ontologies and piRNA Summary for RPS12P13 Gene

Genomics for RPS12P13 Gene

GeneHancer (GH) Regulatory Elements for RPS12P13 Gene

Promoters and enhancers for RPS12P13 Gene
GeneHancer (GH) Identifier GH Type GH
Score
GH Sources Gene Association Score Total Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor
Binding Sites
Gene Targets
GH06I108847 Promoter/Enhancer 2 EPDnew Ensembl ENCODE 0.4 +8.2 8232 1.6 ATF1 ZFP64 ARID4B SIN3A DMAP1 ZNF2 ZNF48 YY1 SLC30A9 POLR2B ARMC2 ENSG00000271730 RPS12P13
GH06I108850 Promoter/Enhancer 1.4 EPDnew Ensembl ENCODE 0.4 +5.9 5936 1.6 SAP130 MLX CEBPG DMAP1 YY1 ZNF664 HOMEZ RXRA HLF CEBPB ARMC2 RPS12P13
GH06I108871 Enhancer 1.3 FANTOM5 Ensembl ENCODE dbSUPER 0.4 -17.0 -16969 4.1 BMI1 BATF ZIC2 IRF4 NFATC1 ATF7 ETV6 BCLAF1 IKZF2 RUNX3 ARMC2 RNU6-653P ARMC2-AS1 ZBTB24 SESN1 RPS12P13 ATP5MFP2
GH06I108895 Enhancer 1.5 FANTOM5 Ensembl ENCODE dbSUPER 0.3 -39.7 -39733 2.7 FOXA2 KLF17 ZNF76 RAD21 YY1 ZEB1 KLF7 FOS RUNX3 SP3 ARMC2 RNU6-653P ARMC2-AS1 OSTM1-AS1 FOXO3 CD164 ATP5MFP2 RPS12P13
GH06I108862 Enhancer 0.7 Ensembl 0.4 -6.2 -6187 0.6 SMARCE1 CTCF MTA2 TEAD4 TAL1 CBFA2T3 DPF2 TCF12 NFIC NCOR1 RPS12P13 ARMC2 ATP5MFP2
- Elite GeneHancer and/or Elite GeneHancer-gene association Download GeneHancer data dump

GeneHancers around RPS12P13 on UCSC Golden Path with GeneCards custom track

Genomic Locations for RPS12P13 Gene

Genomic Locations for RPS12P13 Gene
chr6:108,856,353-108,856,737
(GRCh38/hg38)
Size:
385 bases
Orientation:
Minus strand
chr6:109,177,556-109,177,940
(GRCh37/hg19)

Genomic View for RPS12P13 Gene

Genes around RPS12P13 on UCSC Golden Path with GeneCards custom track

Cytogenetic band:
RPS12P13 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for RPS12P13 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

RefSeq DNA sequence for RPS12P13 Gene

Proteins for RPS12P13 Gene

Post-translational modifications for RPS12P13 Gene

No Post-translational modifications

No data available for DME Specific Peptides for RPS12P13 Gene

Domains & Families for RPS12P13 Gene

Graphical View of Domain Structure for InterPro Entry

No data available for Gene Families , Protein Domains , Suggested Antigen Peptide Sequences and UniProtKB/Swiss-Prot for RPS12P13 Gene

Function for RPS12P13 Gene

Animal Model Products

Clone Products

No data available for Molecular function , Enzyme Numbers (IUBMB) , Phenotypes From GWAS Catalog , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for RPS12P13 Gene

Localization for RPS12P13 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS , Subcellular locations from the Human Protein Atlas (HPA) and Gene Ontology (GO) - Cellular Components for RPS12P13 Gene

Pathways & Interactions for RPS12P13 Gene

SuperPathways for RPS12P13 Gene

No Data Available

Interacting Proteins for RPS12P13 Gene

Gene Ontology (GO) - Biological Process for RPS12P13 Gene

None

No data available for Pathways by source and SIGNOR curated interactions for RPS12P13 Gene

Drugs & Compounds for RPS12P13 Gene

No Compound Related Data Available

Transcripts for RPS12P13 Gene

mRNA/cDNA for RPS12P13 Gene

(1) Ensembl transcripts including schematic representations, and UCSC links where relevant :

Clone Products

Alternative Splicing Database (ASD) splice patterns (SP) for RPS12P13 Gene

No ASD Table

Relevant External Links for RPS12P13 Gene

GeneLoc Exon Structure for
RPS12P13
ECgene alternative splicing isoforms for
RPS12P13

Expression for RPS12P13 Gene

mRNA expression in normal human tissues from GTEx, Illumina, BioGPS, and CGAP SAGE for RPS12P13 Gene

NURSA nuclear receptor signaling pathways regulating expression of RPS12P13 Gene:

RPS12P13
genes like me logo Genes that share expression patterns with RPS12P13: view

No data available for mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , mRNA differential expression in normal tissues , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners , mRNA Expression by UniProt/SwissProt , Evidence on tissue expression from TISSUES and Phenotype-based relationships between genes and organs from Gene ORGANizer for RPS12P13 Gene

Orthologs for RPS12P13 Gene

Evolution for RPS12P13 Gene

ENSEMBL:
Gene Tree for RPS12P13 (if available)
TreeFam:
Gene Tree for RPS12P13 (if available)

No data available for Orthologs for RPS12P13 Gene

Paralogs for RPS12P13 Gene

No data available for Paralogs for RPS12P13 Gene

Variants for RPS12P13 Gene

Additional Variant Information for RPS12P13 Gene

SNPedia medical, phenotypic, and genealogical associations of SNPs for
RPS12P13

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Sequence variations from dbSNP and Humsavar , Structural Variations from Database of Genomic Variants (DGV) and Variation tolerance for RPS12P13 Gene

Disorders for RPS12P13 Gene

No disorders were found for RPS12P13 Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot , Genatlas and External Links for RPS12P13 Gene

Publications for RPS12P13 Gene

  1. Comparative analysis of processed ribosomal protein pseudogenes in four mammalian genomes. (PMID: 19123937) Balasubramanian S … Gerstein M (Genome biology 2009) 2 3 58

Products for RPS12P13 Gene

Sources for RPS12P13 Gene

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