RPS11P6 Gene (Pseudogene)

Ribosomal Protein S11 Pseudogene 6

GC12P064396
GIFtS:
8

Aliases for RPS11P6 Gene

Aliases for RPS11P6 Gene

  • Ribosomal Protein S11 Pseudogene 6 2 3
  • RPS11_2_1249 3

External Ids for RPS11P6 Gene

Previous GeneCards Identifiers for RPS11P6 Gene

  • GC12P063077
  • GC12P064747
  • GC12P064617
  • GC12P064222

Summaries for RPS11P6 Gene

GeneCards Summary for RPS11P6 Gene

RPS11P6 (Ribosomal Protein S11 Pseudogene 6) is a Pseudogene.

Additional gene information for RPS11P6 Gene

No data available for Entrez Gene Summary , CIViC Summary , UniProtKB/Swiss-Prot Summary , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , Rfam classification and piRNA Summary for RPS11P6 Gene

Genomics for RPS11P6 Gene

GeneHancer (GH) Regulatory Elements for RPS11P6 Gene

Promoters and enhancers for RPS11P6 Gene
GeneHancer (GH) Identifier GH Type GH
Score		 GH Sources Gene Association Score Total Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor
Binding Sites		 Gene Targets
GH12J064394 Enhancer 0.3 Ensembl 500.7 -0.3 -309 1.8 JUN RPS11P6 TBK1 C12orf56 ENSG00000243024 lnc-XPOT-4
GH12J064399 Enhancer 0.9 Ensembl ENCODE 0.7 +4.2 4191 1.2 NRF1 USF1 NCOR1 PBX2 FOSL1 NR2F1 FOXM1 GATA2 MITF ETV1 TBK1 RPS11P6 XPOT
GH12J064393 Enhancer 0.3 Ensembl 0.7 -2.5 -2509 1 RFX1 C12orf56 RPS11P6 ENSG00000243024 lnc-XPOT-4
- Elite GeneHancer and/or Elite GeneHancer-gene association Download GeneHancer data from 2017 publication | Request up-to-date GeneHancer data (full dataset)

GeneHancers around RPS11P6 on UCSC Golden Path with GeneCards custom track

Genomic Locations for RPS11P6 Gene

Genomic Locations for RPS11P6 Gene
chr12:64,396,010-64,397,000
(GRCh38/hg38)
Size:
991 bases
Orientation:
Plus strand
chr12:64,616,117-64,790,845
(GRCh37/hg19)
Size:
174,729 bases
Orientation:
Plus strand

Genomic View for RPS11P6 Gene

Genes around RPS11P6 on UCSC Golden Path with GeneCards custom track

Cytogenetic band:
RPS11P6 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for RPS11P6 Gene
GeneLoc Logo Genomic Neighborhood • Exon Structure • Gene Density

RefSeq DNA sequence for RPS11P6 Gene

Proteins for RPS11P6 Gene

Products:

  1. Antibody
  2. Protein
  3. Assay

Post-translational modifications for RPS11P6 Gene

No Post-translational modifications

No data available for DME Specific Peptides for RPS11P6 Gene

Domains & Families for RPS11P6 Gene

No data available for Gene Families , Protein Domains , Suggested Antigen Peptide Sequences , Graphical View of Domain Structure and UniProtKB/Swiss-Prot for RPS11P6 Gene

Function for RPS11P6 Gene

Products:

  1. Animal Model
  2. CRISPR
  3. miRNA
  4. Inhibitory RNA
  5. Clone
  6. Cell Line

Animal Model Products

CRISPR Products

No data available for Molecular function , Enzyme Numbers (IUBMB) , Phenotypes From GWAS Catalog , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for RPS11P6 Gene

Localization for RPS11P6 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS , Subcellular locations from the Human Protein Atlas (HPA) and Gene Ontology (GO) - Cellular Components for RPS11P6 Gene

Pathways & Interactions for RPS11P6 Gene

PathCards logo

SuperPathways for RPS11P6 Gene

No Data Available
;

Gene Ontology (GO) - Biological Process for RPS11P6 Gene

None

No data available for Pathways by source , Interacting Proteins and SIGNOR curated interactions for RPS11P6 Gene

Drugs & Compounds for RPS11P6 Gene

Products:

  1. Drug
No Compound Related Data Available

Transcripts for RPS11P6 Gene

Products:

  1. CRISPR
  2. miRNA
  3. Inhibitory RNA
  4. Clone

mRNA/cDNA for RPS11P6 Gene

3 NCBI additional mRNA sequence :

CRISPR Products

Alternative Splicing Database (ASD) splice patterns (SP) for RPS11P6 Gene

No ASD Table

Relevant External Links for RPS11P6 Gene

GeneLoc Exon Structure for
RPS11P6

Expression for RPS11P6 Gene

Products:

  1. Primer
  2. Gene Expression Assay

mRNA expression in normal human tissues from GTEx, Illumina, BioGPS, and SAGE for RPS11P6 Gene

mRNA expression in normal human tissues for RPS11P6 Gene
mRNA expression by GTEx for RPS11P6 Gene

mRNA differential expression in normal tissues according to GTEx for RPS11P6 Gene

This gene is overexpressed in Testis (x17.9).
genes like me logo Genes that share expression patterns with RPS11P6: view

No data available for mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners , mRNA Expression by UniProt/SwissProt , Evidence on tissue expression from TISSUES and Phenotype-based relationships between genes and organs from Gene ORGANizer for RPS11P6 Gene

Orthologs for RPS11P6 Gene

No data available for Orthologs and Evolution for RPS11P6 Gene

Paralogs for RPS11P6 Gene

No data available for Paralogs for RPS11P6 Gene

Variants for RPS11P6 Gene

Products:

  1. SNP Genotyping and Copy Number Assay

Additional Variant Information for RPS11P6 Gene

SNPedia medical, phenotypic, and genealogical associations of SNPs for
RPS11P6

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Sequence variations, with clinical significance, from ClinVar and Humsavar, with links to dbSNP , Additional dbSNP identifiers (rs#s) , Structural Variations from Database of Genomic Variants (DGV) and Variation tolerance for RPS11P6 Gene

Disorders for RPS11P6 Gene

Additional Disease Information for RPS11P6

ATLAS of Genetics and Cytogenetics in Oncology and Haematology

No disorders were found for RPS11P6 Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot and Genatlas for RPS11P6 Gene

Publications for RPS11P6 Gene

  1. Comparative analysis of processed ribosomal protein pseudogenes in four mammalian genomes. (PMID: 19123937) Balasubramanian S … Gerstein M (Genome biology 2009) 2 3 54

ExternalLinks

View latest publications for RPS11P6 gene in Mastermind

Products for RPS11P6 Gene

Sources for RPS11P6 Gene