Aliases for RPS11P5 Gene

Aliases for RPS11P5 Gene

  • Ribosomal Protein S11 Pseudogene 5 2 3 5
  • RPS11_3_1298 3

External Ids for RPS11P5 Gene

Previous GeneCards Identifiers for RPS11P5 Gene

  • GC12P131914
  • GC12P133403

Summaries for RPS11P5 Gene

GeneCards Summary for RPS11P5 Gene

RPS11P5 (Ribosomal Protein S11 Pseudogene 5) is a Pseudogene.

Additional gene information for RPS11P5 Gene

No data available for Entrez Gene Summary , CIViC Summary , UniProtKB/Swiss-Prot Summary , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , Rfam classification and piRNA Summary for RPS11P5 Gene

Genomics for RPS11P5 Gene

GeneHancer (GH) Regulatory Elements for RPS11P5 Gene

Promoters and enhancers for RPS11P5 Gene
GeneHancer (GH) Identifier GH Type GH
Score
GH Sources Gene Association Score Total Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor
Binding Sites
Gene Targets
GH12J132826 Promoter/Enhancer 0.6 EPDnew dbSUPER 500.7 +0.6 569 0.1 RBFOX2 GOLGA3 RPS11P5 lnc-CHFR-3 CHFR
GH12J132823 Enhancer 0.5 Ensembl dbSUPER 500.7 -1.4 -1380 0.6 KLF1 FOS RPS11P5 ZNF605 GOLGA3 piR-57098-004 lnc-CHFR-3 CHFR
GH12J132825 Promoter/Enhancer 0.5 Ensembl dbSUPER 500.7 +0.2 220 0.6 RPS11P5 ANKLE2 GOLGA3 lnc-CHFR-3 CHFR
GH12J132828 Enhancer 0.4 ENCODE dbSUPER 500.7 +1.3 1289 0.2 POLR2A RPS11P5 CHFR GOLGA3 lnc-CHFR-3
GH12J132824 Enhancer 0.4 dbSUPER 500.7 -0.4 -417 0.5 KLF9 POLR2A POLR2G RBFOX2 RPS11P5 ANKLE2 GOLGA3 piR-57098-004 lnc-CHFR-3 CHFR
- Elite GeneHancer and/or Elite GeneHancer-gene association Download GeneHancer data from 2017 publication | Request up-to-date GeneHancer data (full dataset)

GeneHancers around RPS11P5 on UCSC Golden Path with GeneCards custom track

Genomic Locations for RPS11P5 Gene

Genomic Locations for RPS11P5 Gene
chr12:132,825,681-132,826,237
(GRCh38/hg38)
Size:
557 bases
Orientation:
Plus strand
chr12:133,402,267-133,402,848
(GRCh37/hg19)
Size:
582 bases
Orientation:
Plus strand

Genomic View for RPS11P5 Gene

Genes around RPS11P5 on UCSC Golden Path with GeneCards custom track

Cytogenetic band:
RPS11P5 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for RPS11P5 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

RefSeq DNA sequence for RPS11P5 Gene

Proteins for RPS11P5 Gene

Post-translational modifications for RPS11P5 Gene

No Post-translational modifications

No data available for DME Specific Peptides for RPS11P5 Gene

Domains & Families for RPS11P5 Gene

No data available for Gene Families , Protein Domains , Suggested Antigen Peptide Sequences , Graphical View of Domain Structure and UniProtKB/Swiss-Prot for RPS11P5 Gene

Function for RPS11P5 Gene

Phenotypes From GWAS Catalog for RPS11P5 Gene

Phenotypes for RPS11P5 Gene

genes like me logo Genes that share phenotypes with RPS11P5: view

Animal Model Products

CRISPR Products

No data available for Molecular function , Enzyme Numbers (IUBMB) , Gene Ontology (GO) - Molecular Function , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for RPS11P5 Gene

Localization for RPS11P5 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS , Subcellular locations from the Human Protein Atlas (HPA) and Gene Ontology (GO) - Cellular Components for RPS11P5 Gene

Pathways & Interactions for RPS11P5 Gene

PathCards logo

SuperPathways for RPS11P5 Gene

No Data Available
;

Gene Ontology (GO) - Biological Process for RPS11P5 Gene

None

No data available for Pathways by source , Interacting Proteins and SIGNOR curated interactions for RPS11P5 Gene

Drugs & Compounds for RPS11P5 Gene

No Compound Related Data Available

Transcripts for RPS11P5 Gene

mRNA/cDNA for RPS11P5 Gene

1 Ensembl transcripts including schematic representations, and UCSC links to gene/alias where relevant :

Alternative Splicing Database (ASD) splice patterns (SP) for RPS11P5 Gene

No ASD Table

Relevant External Links for RPS11P5 Gene

GeneLoc Exon Structure for
RPS11P5

Expression for RPS11P5 Gene

mRNA expression in normal human tissues from GTEx, Illumina, BioGPS, and SAGE for RPS11P5 Gene

genes like me logo Genes that share expression patterns with RPS11P5: view

No data available for mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , mRNA differential expression in normal tissues , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners , mRNA Expression by UniProt/SwissProt , Evidence on tissue expression from TISSUES and Phenotype-based relationships between genes and organs from Gene ORGANizer for RPS11P5 Gene

Orthologs for RPS11P5 Gene

Evolution for RPS11P5 Gene

ENSEMBL:
Gene Tree for RPS11P5 (if available)
TreeFam:
Gene Tree for RPS11P5 (if available)

No data available for Orthologs for RPS11P5 Gene

Paralogs for RPS11P5 Gene

No data available for Paralogs for RPS11P5 Gene

Variants for RPS11P5 Gene

Additional Variant Information for RPS11P5 Gene

SNPedia medical, phenotypic, and genealogical associations of SNPs for
RPS11P5

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Sequence variations, with clinical significance, from ClinVar and Humsavar, with links to dbSNP , Additional dbSNP identifiers (rs#s) , Structural Variations from Database of Genomic Variants (DGV) and Variation tolerance for RPS11P5 Gene

Disorders for RPS11P5 Gene

No disorders were found for RPS11P5 Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot , Genatlas and External Links for RPS11P5 Gene

Publications for RPS11P5 Gene

  1. Comparative analysis of processed ribosomal protein pseudogenes in four mammalian genomes. (PMID: 19123937) Balasubramanian S … Gerstein M (Genome biology 2009) 2 3 54

Products for RPS11P5 Gene

Sources for RPS11P5 Gene