RPS10P9 Gene (Pseudogene)

Ribosomal Protein S10 Pseudogene 9

GC02P064747
GIFtS:
8
See more...

Aliases for RPS10P9 Gene

Aliases for RPS10P9 Gene

  • Ribosomal Protein S10 Pseudogene 9 2 3
  • Ribosomal Protein S10 (RPS10) Pseudogene 5
  • RPS10_3_235 3
  • AC007365.2 5

External Ids for RPS10P9 Gene

Previous GeneCards Identifiers for RPS10P9 Gene

  • GC02P064893

Summaries for RPS10P9 Gene

GeneCards Summary for RPS10P9 Gene

RPS10P9 (Ribosomal Protein S10 Pseudogene 9) is a Pseudogene.

Additional gene information for RPS10P9 Gene

No data available for Entrez Gene Summary , CIViC Summary , UniProtKB/Swiss-Prot Summary , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , Rfam classification and piRNA Summary for RPS10P9 Gene

Genomics for RPS10P9 Gene

GeneHancer (GH) Regulatory Elements Pubs

Download GeneHancer 2017 data
Promoters and enhancers for RPS10P9 Gene
GeneHancer (GH) Identifier GH Type GH
Score		 GH Sources Gene Association Score Total Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor
Binding Sites		 Gene Targets
GH02J064665 Promoter/Enhancer 1.5 FANTOM5 Ensembl ENCODE dbSUPER 600.7 +1.3 1258 3.6 SP1 GATAD2A REST TFE3 RXRB IRF2 IKZF2 GABPA SOX13 TCF7 RPS10P9 SERTAD2 AFTPH lnc-RAB1A-12
GH02J064635 Promoter/Enhancer 2.6 EPDnew FANTOM5 Ensembl ENCODE CraniofacialAtlas dbSUPER 0.4 -17.6 -17573 24.5 SP1 HNRNPL CREB1 GATAD2A CTCF ATF7 TEAD4 PRDM10 ZNF629 TFE3 SERTAD2 VPS54 AFTPH LINC02576 ENSG00000251775 ENSG00000226756 LOC105374775 RPS10P9
GH02J064661 Promoter/Enhancer 1 Ensembl ENCODE dbSUPER 0.7 -3.4 -3370 1.6 PRDM1 BCLAF1 SMC3 ZBTB17 SPI1 SMARCA5 TBX21 MLLT1 CTCF SERTAD2 RPS10P9 ENSG00000226756 AFTPH
GH02J064669 Enhancer 1 ENCODE dbSUPER 0.7 +3.9 3891 0.2 GATAD2A ATF7 TFE3 SOX13 RCOR2 RXRB IRF2 GABPA SOX6 CEBPA SERTAD2 RPS10P9 lnc-RAB1A-12 AFTPH
GH02J064663 Promoter/Enhancer 0.7 Ensembl dbSUPER 0.7 -2.1 -2070 0.2 ZNF316 MAFK SERTAD2 RPS10P9 ENSG00000226756 AFTPH
- Elite GeneHancer and/or Elite GeneHancer-gene association Download GeneHancer data from 2017 publication | Request up-to-date GeneHancer data (full dataset)

GeneHancers around RPS10P9 on the GeneHancer Hub at the UCSC Golden Path

Genomic Locations for RPS10P9 Gene

Genomic Locations for RPS10P9 Gene
chr2:64,665,571-64,666,121
(GRCh38/hg38)
Size:
551 bases
Orientation:
Plus strand
chr2:64,892,705-64,893,257
(GRCh37/hg19)
Size:
553 bases
Orientation:
Plus strand

Genomic View for RPS10P9 Gene

Genes around RPS10P9 on UCSC Golden Path with GeneCards custom track

Cytogenetic band:
RPS10P9 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for RPS10P9 Gene
GeneLoc Logo Genomic Neighborhood • Exon Structure • Gene Density

RefSeq DNA sequence for RPS10P9 Gene

Proteins for RPS10P9 Gene

Products:

  1. Antibody
  2. Protein
  3. Assay

Post-translational modifications for RPS10P9 Gene

No Post-translational modifications

No data available for DME Specific Peptides for RPS10P9 Gene

Domains & Families for RPS10P9 Gene

No data available for Gene Families , Protein Domains , Suggested Antigen Peptide Sequences , Graphical View of Domain Structure and UniProtKB/Swiss-Prot for RPS10P9 Gene

Function for RPS10P9 Gene

Products:

  1. Animal Model
  2. CRISPR
  3. miRNA
  4. Inhibitory RNA
  5. Clone
  6. Cell Line

Phenotypes From GWAS Catalog for RPS10P9 Gene

Phenotypes for RPS10P9 Gene

GenomeRNAi human phenotypes for RPS10P9:
genes like me logo Genes that share phenotypes with RPS10P9: view

Animal Model Products

CRISPR Products

No data available for Molecular function , Enzyme Numbers (IUBMB) , Gene Ontology (GO) - Molecular Function , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for RPS10P9 Gene

Localization for RPS10P9 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS , Subcellular locations from the Human Protein Atlas (HPA) and Gene Ontology (GO) - Cellular Components for RPS10P9 Gene

Pathways & Interactions for RPS10P9 Gene

PathCards logo

SuperPathways for RPS10P9 Gene

No Data Available

Gene Ontology (GO) - Biological Process for RPS10P9 Gene

None

No data available for Pathways by source , Interacting Proteins and SIGNOR curated interactions for RPS10P9 Gene

Drugs & Compounds for RPS10P9 Gene

Products:

  1. Drug
No Compound Related Data Available

Transcripts for RPS10P9 Gene

Products:

  1. CRISPR
  2. miRNA
  3. Inhibitory RNA
  4. Clone

mRNA/cDNA for RPS10P9 Gene

1 Ensembl transcripts including schematic representations, and UCSC links to gene/alias where relevant :

CRISPR Products

Alternative Splicing Database (ASD) splice patterns (SP) for RPS10P9 Gene

No ASD Table

Relevant External Links for RPS10P9 Gene

GeneLoc Exon Structure for
RPS10P9

Expression for RPS10P9 Gene

Products:

  1. Primer

mRNA expression in normal human tissues from GTEx, Illumina, BioGPS, and SAGE for RPS10P9 Gene

mRNA expression in normal human tissues for RPS10P9 Gene
mRNA expression by GTEx for RPS10P9 Gene
genes like me logo Genes that share expression patterns with RPS10P9: view

No data available for mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , mRNA differential expression in normal tissues , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners , mRNA Expression by UniProt/SwissProt , Evidence on tissue expression from TISSUES and Phenotype-based relationships between genes and organs from Gene ORGANizer for RPS10P9 Gene

Orthologs for RPS10P9 Gene

Evolution for RPS10P9 Gene

ENSEMBL:
Gene Tree for RPS10P9 (if available)
TreeFam:
Gene Tree for RPS10P9 (if available)

No data available for Orthologs for RPS10P9 Gene

Paralogs for RPS10P9 Gene

No data available for Paralogs for RPS10P9 Gene

Variants for RPS10P9 Gene

Additional Variant Information for RPS10P9 Gene

SNPedia medical, phenotypic, and genealogical associations of SNPs for
RPS10P9

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Sequence variations, with clinical significance, from ClinVar and Humsavar, with links to dbSNP , Additional dbSNP identifiers (rs#s) , Structural Variations from Database of Genomic Variants (DGV) and Variation tolerance for RPS10P9 Gene

Disorders for RPS10P9 Gene

Additional Disease Information for RPS10P9

Genetic Association Database
(GAD)

No disorders were found for RPS10P9 Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot and Genatlas for RPS10P9 Gene

Publications for RPS10P9 Gene

  1. Comparative analysis of processed ribosomal protein pseudogenes in four mammalian genomes. (PMID: 19123937) Balasubramanian S … Gerstein M (Genome biology 2009) 2 3
  2. Genome-wide association with diabetes-related traits in the Framingham Heart Study. (PMID: 17903298) Meigs JB … Dupuis J (BMC medical genetics 2007) 41

No data available for Mastermind for RPS10P9 Gene

Products for RPS10P9 Gene

Sources for RPS10P9 Gene