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Aliases for RPS10P6 Gene

Aliases for RPS10P6 Gene

  • Ribosomal Protein S10 Pseudogene 6 2 3
  • RPS10_1_98 3
  • AL365436.1 5

External Ids for RPS10P6 Gene

Previous GeneCards Identifiers for RPS10P6 Gene

  • GC01P149796
  • GC01P151530

Summaries for RPS10P6 Gene

GeneCards Summary for RPS10P6 Gene

RPS10P6 (Ribosomal Protein S10 Pseudogene 6) is a Pseudogene.

Additional gene information for RPS10P6 Gene

No data available for Entrez Gene Summary , CIViC summary , UniProtKB/Swiss-Prot , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , fRNAdb sequence ontologies and piRNA Summary for RPS10P6 Gene

Genomics for RPS10P6 Gene

GeneHancer (GH) Regulatory Elements for RPS10P6 Gene

Promoters and enhancers for RPS10P6 Gene
GeneHancer (GH) Identifier GH Type GH
Score
GH Sources Gene Association Score Total Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor
Binding Sites
Gene Targets
GH01I150626 Promoter/Enhancer 2.6 EPDnew FANTOM5 Ensembl ENCODE dbSUPER 20 -928.0 -928038 4.9 HDGF PKNOX1 CLOCK SMAD1 FOXA2 ARNT ARID4B NEUROD1 SIN3A DMAP1 ENSA GC01P150630 SETDB1 PIP5K1A HORMAD1 ARNT PRPF3 RPRD2 UBE2D3P3 SF3B4
GH01I151193 Promoter/Enhancer 2.8 EPDnew FANTOM5 Ensembl ENCODE dbSUPER 11.8 -359.8 -359763 7.7 PKNOX1 CLOCK FOXA2 SMAD1 ARID4B NEUROD1 SIN3A DMAP1 ZNF2 ZBTB7B PIP5K1A ZNF687 LYSMD1 ARNT RPRD2 PRPF3 SETDB1 BNIPL PSMD4 CTSK
GH01I151508 Promoter/Enhancer 2.7 EPDnew FANTOM5 Ensembl ENCODE dbSUPER 12 -44.3 -44290 8.9 HDGF PKNOX1 CLOCK FOXA2 ARID4B NEUROD1 SIN3A ZNF2 ZBTB7B YY1 CGN ARNT SETDB1 PI4KB GOLPH3L UBE2D3P3 CTSK RPS10P6 ZNF687 PIP5K1A
GH01I150969 Promoter/Enhancer 2.7 EPDnew FANTOM5 Ensembl ENCODE dbSUPER 11.8 -582.5 -582452 10.6 CLOCK MLX ZFP64 DMAP1 YY1 E2F8 ZNF143 SP3 SSRP1 GLIS1 CERS2 ENSG00000231073 PRPF3 SETDB1 ZNF687 HORMAD1 PIP5K1A ARNT GOLPH3L PI4KB
GH01I152032 Promoter/Enhancer 2.6 EPDnew FANTOM5 Ensembl ENCODE dbSUPER 11.8 +478.6 478595 6.4 PKNOX1 CLOCK SMAD1 ARNT ARID4B NEUROD1 SIN3A FEZF1 ZNF2 POLR2B S100A11 FLG-AS1 PI4KB RPS10P6 THEM4 ZNF687 PIP5K1A MRPL9 GABPB2 PSMB4
- Elite GeneHancer and/or Elite GeneHancer-gene association Download GeneHancer data dump

GeneHancers around RPS10P6 on UCSC Golden Path with GeneCards custom track

Genomic Locations for RPS10P6 Gene

Genomic Locations for RPS10P6 Gene
chr1:151,557,409-151,557,987
(GRCh38/hg38)
Size:
579 bases
Orientation:
Plus strand
chr1:151,529,885-151,530,463
(GRCh37/hg19)

Genomic View for RPS10P6 Gene

Genes around RPS10P6 on UCSC Golden Path with GeneCards custom track

Cytogenetic band:
RPS10P6 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for RPS10P6 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

RefSeq DNA sequence for RPS10P6 Gene

Proteins for RPS10P6 Gene

Post-translational modifications for RPS10P6 Gene

No Post-translational modifications

No data available for DME Specific Peptides for RPS10P6 Gene

Domains & Families for RPS10P6 Gene

Graphical View of Domain Structure for InterPro Entry

No data available for Gene Families , Protein Domains , Suggested Antigen Peptide Sequences and UniProtKB/Swiss-Prot for RPS10P6 Gene

Function for RPS10P6 Gene

Phenotypes From GWAS Catalog for RPS10P6 Gene

Animal Model Products

Clone Products

No data available for Molecular function , Enzyme Numbers (IUBMB) , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for RPS10P6 Gene

Localization for RPS10P6 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS , Subcellular locations from the Human Protein Atlas (HPA) and Gene Ontology (GO) - Cellular Components for RPS10P6 Gene

Pathways & Interactions for RPS10P6 Gene

SuperPathways for RPS10P6 Gene

No Data Available

Interacting Proteins for RPS10P6 Gene

Gene Ontology (GO) - Biological Process for RPS10P6 Gene

None

No data available for Pathways by source and SIGNOR curated interactions for RPS10P6 Gene

Drugs & Compounds for RPS10P6 Gene

No Compound Related Data Available

Transcripts for RPS10P6 Gene

mRNA/cDNA for RPS10P6 Gene

(1) Ensembl transcripts including schematic representations, and UCSC links where relevant :

Clone Products

Alternative Splicing Database (ASD) splice patterns (SP) for RPS10P6 Gene

No ASD Table

Relevant External Links for RPS10P6 Gene

GeneLoc Exon Structure for
RPS10P6
ECgene alternative splicing isoforms for
RPS10P6

Expression for RPS10P6 Gene

mRNA expression in normal human tissues from GTEx, Illumina, BioGPS, and CGAP SAGE for RPS10P6 Gene

mRNA differential expression in normal tissues according to GTEx for RPS10P6 Gene

This gene is overexpressed in Skin - Not Sun Exposed (Suprapubic) (x4.6), Vagina (x4.5), and Skin - Sun Exposed (Lower leg) (x4.3).

NURSA nuclear receptor signaling pathways regulating expression of RPS10P6 Gene:

RPS10P6
genes like me logo Genes that share expression patterns with RPS10P6: view

No data available for mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners , mRNA Expression by UniProt/SwissProt , Evidence on tissue expression from TISSUES and Phenotype-based relationships between genes and organs from Gene ORGANizer for RPS10P6 Gene

Orthologs for RPS10P6 Gene

Evolution for RPS10P6 Gene

ENSEMBL:
Gene Tree for RPS10P6 (if available)
TreeFam:
Gene Tree for RPS10P6 (if available)

No data available for Orthologs for RPS10P6 Gene

Paralogs for RPS10P6 Gene

No data available for Paralogs for RPS10P6 Gene

Variants for RPS10P6 Gene

Additional Variant Information for RPS10P6 Gene

SNPedia medical, phenotypic, and genealogical associations of SNPs for
RPS10P6

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Sequence variations from dbSNP and Humsavar , Structural Variations from Database of Genomic Variants (DGV) and Variation tolerance for RPS10P6 Gene

Disorders for RPS10P6 Gene

No disorders were found for RPS10P6 Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot , Genatlas and External Links for RPS10P6 Gene

Publications for RPS10P6 Gene

  1. Comparative analysis of processed ribosomal protein pseudogenes in four mammalian genomes. (PMID: 19123937) Balasubramanian S … Gerstein M (Genome biology 2009) 2 3 58

Products for RPS10P6 Gene

Sources for RPS10P6 Gene

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