Aliases for RPS10P25 Gene

Aliases for RPS10P25 Gene

  • Ribosomal Protein S10 Pseudogene 25 2 3
  • RPS10_10_1555 3

External Ids for RPS10P25 Gene

Previous GeneCards Identifiers for RPS10P25 Gene

  • GC17U901179
  • GC17M047226

Summaries for RPS10P25 Gene

GeneCards Summary for RPS10P25 Gene

RPS10P25 (Ribosomal Protein S10 Pseudogene 25) is a Pseudogene.

Additional gene information for RPS10P25 Gene

No data available for Entrez Gene Summary , CIViC Summary , UniProtKB/Swiss-Prot Summary , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , Rfam classification and piRNA Summary for RPS10P25 Gene

Genomics for RPS10P25 Gene

GeneHancer (GH) Regulatory Elements Pubs

Promoters and enhancers for RPS10P25 Gene
GeneHancer (GH) Identifier GH Type GH
Score
GH Sources Gene Association Score Total Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor
Binding Sites
Gene Targets
GH17J049146 Enhancer 0.8 Ensembl ENCODE 250.7 +1.3 1338 2.5 JUND CEBPB FOXA2 BHLHE40 SP7 JUN ARID3A ZNF366 POLR2A ZNF629 ENSG00000240995 RPS10P25 B4GALNT2 SKAP1 HSALNG0117153 ABI3
GH17J049132 Promoter 1 EPDnew Ensembl 0.4 +15.8 15774 0.8 ZNF217 GABPB1 RBPJ ZNF48 IKZF5 ZNF580 ZNF687 HNRNPL EZH2 B4GALNT2 UBE2Z HSALNG0117153 RPS10P25 ABI3
GH17J049147 Enhancer 0.6 Ensembl 0.7 +2.9 2873 0.2 FOXA2 RARA FOXP1 FOXA1 ELF3 RXRB SP5 KAT8 SOX13 FOXA3 SKAP1 RPS10P25 HSALNG0117153 B4GALNT2 ABI3
GH17J049145 Enhancer 0.2 Ensembl 0.7 +3.3 3273 0.2 RPS10P25 HSALNG0117153 B4GALNT2 ABI3
- Elite GeneHancer and/or Elite GeneHancer-gene association Download GeneHancer data from 2017 publication | Request up-to-date GeneHancer data (full dataset)

GeneHancers around RPS10P25 on the GeneHancer Hub at the UCSC Golden Path

Genomic Locations for RPS10P25 Gene

Latest Assembly
chr17:49,148,316-49,148,774
(GRCh38/hg38)
Size:
459 bases
Orientation:
Minus strand

Previous Assembly
chr17:47,225,678-47,226,136
(GRCh37/hg19 by Entrez Gene)
Size:
459 bases
Orientation:
Minus strand

Genomic View for RPS10P25 Gene

Genes around RPS10P25 on UCSC Golden Path with GeneCards custom track

Cytogenetic band:
RPS10P25 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for RPS10P25 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

RefSeq DNA sequence for RPS10P25 Gene

Proteins for RPS10P25 Gene

Post-translational modifications for RPS10P25 Gene

No Post-translational modifications

No data available for DME Specific Peptides for RPS10P25 Gene

Domains & Families for RPS10P25 Gene

No data available for Gene Families , Protein Domains , Suggested Antigen Peptide Sequences , Graphical View of Domain Structure and UniProtKB/Swiss-Prot for RPS10P25 Gene

Function for RPS10P25 Gene

Phenotypes From GWAS Catalog for RPS10P25 Gene

No data available for Molecular function , Enzyme Numbers (IUBMB) , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for RPS10P25 Gene

Localization for RPS10P25 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS , Subcellular locations from the Human Protein Atlas (HPA) and Gene Ontology (GO) - Cellular Components for RPS10P25 Gene

Pathways & Interactions for RPS10P25 Gene

PathCards logo

SuperPathways for RPS10P25 Gene

No Data Available

Gene Ontology (GO) - Biological Process for RPS10P25 Gene

None

No data available for Pathways by source , Interacting Proteins and SIGNOR curated interactions for RPS10P25 Gene

Drugs & Compounds for RPS10P25 Gene

No Compound Related Data Available

Transcripts for RPS10P25 Gene

Alternative Splicing Database (ASD) splice patterns (SP) for RPS10P25 Gene

No ASD Table

Relevant External Links for RPS10P25 Gene

GeneLoc Exon Structure for
RPS10P25

No data available for mRNA/cDNA for RPS10P25 Gene

Expression for RPS10P25 Gene

mRNA expression in normal human tissues from GTEx, Illumina, BioGPS, and SAGE for RPS10P25 Gene

mRNA differential expression in normal tissues according to GTEx for RPS10P25 Gene

This gene is overexpressed in Colon - Transverse (x28.9), Kidney - Cortex (x8.4), and Stomach (x4.7).
genes like me logo Genes that share expression patterns with RPS10P25: view

No data available for mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners , mRNA Expression by UniProt/SwissProt , Evidence on tissue expression from TISSUES and Phenotype-based relationships between genes and organs from Gene ORGANizer for RPS10P25 Gene

Orthologs for RPS10P25 Gene

No data available for Orthologs and Evolution for RPS10P25 Gene

Paralogs for RPS10P25 Gene

No data available for Paralogs for RPS10P25 Gene

Variants for RPS10P25 Gene

Additional Variant Information for RPS10P25 Gene

SNPedia medical, phenotypic, and genealogical associations of SNPs for
RPS10P25
Leiden Open Variation Database (LOVD)
RPS10P25

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Sequence variations, with clinical significance, from ClinVar and Humsavar, with links to dbSNP , dbSNP identifiers (rs#s) for variants without ClinVar clinical significance , Structural Variations from Database of Genomic Variants (DGV) and Variation tolerance for RPS10P25 Gene

Disorders for RPS10P25 Gene

No disorders were found for RPS10P25 Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot , Genatlas and External Links for RPS10P25 Gene

Publications for RPS10P25 Gene

  1. Comparative analysis of processed ribosomal protein pseudogenes in four mammalian genomes. (PMID: 19123937) Balasubramanian S … Gerstein M (Genome biology 2009) 2 3

No data available for Mastermind for RPS10P25 Gene

Products for RPS10P25 Gene

Sources for RPS10P25 Gene