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RPS10P1 Gene(Pseudogene)

Ribosomal Protein S10 Pseudogene 1

GCID:
GC06P026966
GIFtS:
11
Genes Participants
UDN Logo

Aliases for RPS10P1 Gene

Aliases for RPS10P1 Gene

  • Ribosomal Protein S10 Pseudogene 1 2 3
  • RPS10_7_669 3
  • DJ34B20.13 3
  • AL031777.1 5
  • RPS10p 3

External Ids for RPS10P1 Gene

Previous GeneCards Identifiers for RPS10P1 Gene

  • GC00U914133
  • GC06U900601
  • GC06P026311
  • GC06P026203
  • GC06P026145
  • GC06P026205
  • GC06P026206
  • GC06P026208
  • GC06P026224
  • GC06P026247
  • GC06P026269
  • GC06P026315
  • GC06P026254
  • GC06P026356
  • GC06P026388
  • GC06P026417
  • GC06P026488
  • GC06P026774
  • GC06P026856

Summaries for RPS10P1 Gene

GeneCards Summary for RPS10P1 Gene

RPS10P1 (Ribosomal Protein S10 Pseudogene 1) is a Pseudogene.

Additional gene information for RPS10P1 Gene

No data available for Entrez Gene Summary , CIViC summary , UniProtKB/Swiss-Prot , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , fRNAdb sequence ontologies and piRNA Summary for RPS10P1 Gene

Genomics for RPS10P1 Gene

Products:

  1. Regulatory Element

GeneHancer (GH) Regulatory Elements for RPS10P1 Gene

Promoters and enhancers for RPS10P1 Gene
GeneHancer (GH) Identifier GH Type GH
Score		 GH Sources Gene Association Score Total Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor
Binding Sites		 Gene Targets
GH06I026193 Promoter/Enhancer 2.4 EPDnew Ensembl ENCODE dbSUPER 550.8 -1.3 -1331 14.6 ZFP64 DMAP1 IRF4 YY1 SLC30A9 ZNF213 E2F8 ZNF143 SP3 NFYC ENSG00000282988 HIST1H2AD HIST1H2BF HIST1H3D HIST1H4E RPS10P1 ABT1 HMGN4 BTN2A3P BTN2A1
GH06I026309 Enhancer 1.5 Ensembl ENCODE dbSUPER 10.5 +109.7 109718 4.9 MLX YBX1 FEZF1 DMAP1 IRF4 YY1 ZNF213 ZNF143 NFYC MEF2D GC06M026658 TRS-TGA3-1 TRX-CAT1-3 TRQ-TTG3-2 TRQ-TTG3-1 ABT1 ZNF322 BTN2A2 BTN2A1 BTN3A2
GH06I026162 Enhancer 0.6 Ensembl 10.3 -40.6 -40622 0.2 BCOR ARNT MNT DPF2 FOSL1 POLR2B PRDM6 POLR2A IKZF1 ZSCAN5C HIST1H4D HIST1H1PS1 HIST1H2AD HIST1H3D HIST1H3E HIST1H2APS3 HIST1H2BF RPS10P1 HIST1H4C HIST1H4F
- Elite GeneHancer and/or Elite GeneHancer-gene association Download GeneHancer data dump

GeneHancers around RPS10P1 on UCSC Golden Path with GeneCards custom track

Genomic Locations for RPS10P1 Gene

Genomic Locations for RPS10P1 Gene
chr6:26,202,123-26,202,715
(GRCh38/hg38)
Size:
593 bases
Orientation:
Plus strand
chr6:26,202,351-26,202,943
(GRCh37/hg19)

Genomic View for RPS10P1 Gene

Genes around RPS10P1 on UCSC Golden Path with GeneCards custom track

Cytogenetic band:
RPS10P1 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for RPS10P1 Gene
GeneLoc Logo Genomic Neighborhood • Exon Structure • Gene Density

RefSeq DNA sequence for RPS10P1 Gene

Proteins for RPS10P1 Gene

Products:

  1. Antibody
  2. Protein
  3. Assay

Post-translational modifications for RPS10P1 Gene

No Post-translational modifications

No data available for DME Specific Peptides for RPS10P1 Gene

Domains & Families for RPS10P1 Gene

Graphical View of Domain Structure for InterPro Entry

No data available for Gene Families , Protein Domains , Suggested Antigen Peptide Sequences and UniProtKB/Swiss-Prot for RPS10P1 Gene

Function for RPS10P1 Gene

Products:

  1. Animal Model
  2. CRISPR
  3. miRNA
  4. Inhibitory RNA
  5. Clone
  6. Cell Line

Phenotypes From GWAS Catalog for RPS10P1 Gene

Animal Model Products

Clone Products

No data available for Molecular function , Enzyme Numbers (IUBMB) , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for RPS10P1 Gene

Localization for RPS10P1 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS , Subcellular locations from the Human Protein Atlas (HPA) and Gene Ontology (GO) - Cellular Components for RPS10P1 Gene

Pathways & Interactions for RPS10P1 Gene

SuperPathways for RPS10P1 Gene

PathCards logo More details on SuperPathways for RPS10P1
No Data Available

Interacting Proteins for RPS10P1 Gene

Gene Ontology (GO) - Biological Process for RPS10P1 Gene

None

No data available for Pathways by source and SIGNOR curated interactions for RPS10P1 Gene

Drugs & Compounds for RPS10P1 Gene

Products:

  1. Drug
No Compound Related Data Available

Transcripts for RPS10P1 Gene

Products:

  1. CRISPR
  2. miRNA
  3. Inhibitory RNA
  4. Clone

mRNA/cDNA for RPS10P1 Gene

(1) Ensembl transcripts including schematic representations, and UCSC links where relevant :

Clone Products

Alternative Splicing Database (ASD) splice patterns (SP) for RPS10P1 Gene

No ASD Table

Relevant External Links for RPS10P1 Gene

GeneLoc Exon Structure for
RPS10P1
ECgene alternative splicing isoforms for
RPS10P1

Expression for RPS10P1 Gene

Products:

  1. Primer

mRNA expression in normal human tissues from GTEx, Illumina, BioGPS, and CGAP SAGE for RPS10P1 Gene

mRNA expression in normal human tissues for RPS10P1 Gene
mRNA expression by GTEx for RPS10P1 Gene

mRNA differential expression in normal tissues according to GTEx for RPS10P1 Gene

This gene is overexpressed in Whole Blood (x8.3), Esophagus - Mucosa (x5.8), and Prostate (x4.6).

NURSA nuclear receptor signaling pathways regulating expression of RPS10P1 Gene:

RPS10P1
genes like me logo Genes that share expression patterns with RPS10P1: view

No data available for mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners , mRNA Expression by UniProt/SwissProt , Evidence on tissue expression from TISSUES and Phenotype-based relationships between genes and organs from Gene ORGANizer for RPS10P1 Gene

Orthologs for RPS10P1 Gene

Evolution for RPS10P1 Gene

ENSEMBL:
Gene Tree for RPS10P1 (if available)
TreeFam:
Gene Tree for RPS10P1 (if available)

No data available for Orthologs for RPS10P1 Gene

Paralogs for RPS10P1 Gene

No data available for Paralogs for RPS10P1 Gene

Variants for RPS10P1 Gene

Additional Variant Information for RPS10P1 Gene

SNPedia medical, phenotypic, and genealogical associations of SNPs for
RPS10P1

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Sequence variations from dbSNP and Humsavar , Structural Variations from Database of Genomic Variants (DGV) and Variation tolerance for RPS10P1 Gene

Disorders for RPS10P1 Gene

No disorders were found for RPS10P1 Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot , Genatlas and External Links for RPS10P1 Gene

Publications for RPS10P1 Gene

  1. Comparative analysis of processed ribosomal protein pseudogenes in four mammalian genomes. (PMID: 19123937) Balasubramanian S … Gerstein M (Genome biology 2009) 2 3 58

Products for RPS10P1 Gene

Sources for RPS10P1 Gene

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