RPS10P1 Gene (Pseudogene)

Ribosomal Protein S10 Pseudogene 1

GC06P028684
GIFtS:
8
See more...

Aliases for RPS10P1 Gene

Aliases for RPS10P1 Gene

  • Ribosomal Protein S10 Pseudogene 1 2 3
  • DJ34B20.13 2 3
  • RPS10p 2 3
  • Ribosomal Protein S10 (RPS10) Pseudogene 5
  • RPS10_7_669 3
  • AL031777.1 5

External Ids for RPS10P1 Gene

Previous GeneCards Identifiers for RPS10P1 Gene

  • GC00U914133
  • GC06U900601
  • GC06P026311
  • GC06P026203
  • GC06P026145
  • GC06P026205
  • GC06P026206
  • GC06P026208
  • GC06P026224
  • GC06P026247
  • GC06P026269
  • GC06P026315
  • GC06P026254
  • GC06P026356
  • GC06P027319
  • GC06P027434
  • GC06P027567
  • GC06P028007
  • GC06P026388
  • GC06P026417
  • GC06P026488
  • GC06P026774
  • GC06P026856
  • GC06P026966
  • GC06P027067
  • GC06P027207

Summaries for RPS10P1 Gene

GeneCards Summary for RPS10P1 Gene

RPS10P1 (Ribosomal Protein S10 Pseudogene 1) is a Pseudogene.

Additional gene information for RPS10P1 Gene

No data available for Entrez Gene Summary , CIViC Summary , UniProtKB/Swiss-Prot Summary , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , Rfam classification and piRNA Summary for RPS10P1 Gene

Genomics for RPS10P1 Gene

GeneHancer (GH) Regulatory Elements Pubs

Download GeneHancer 2017 data
Promoters and enhancers for RPS10P1 Gene
GeneHancer (GH) Identifier GH Type GH
Score		 GH Sources Gene Association Score Total Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor
Binding Sites		 Gene Targets
GH06J026193 Promoter/Enhancer 2.1 Ensembl ENCODE CraniofacialAtlas dbSUPER 600.7 -1.3 -1331 14.6 ARHGAP35 SP1 HNRNPL CREB1 GATAD2A ATF7 TEAD4 PRDM10 REST ZNF629 H2AC7 H2BC7 H3C4 ENSG00000282988 RPS10P1 ABT1 BTN2A2 BTN2A1 HMGN4 BTN2A3P
GH06J026154 Promoter/Enhancer 2.4 EPDnew Ensembl ENCODE CraniofacialAtlas dbSUPER 10.3 -43.8 -43836 7 ARHGAP35 SP1 HNRNPL CREB1 ARID3A TEAD4 PRDM10 ZNF629 REST TFE3 H2BC5 H1-4 MN298275 lnc-HIST1H4D-2 lnc-HIST1H4D-3 piR-52250 piR-40328 piR-58207 piR-57285-001 ABT1
GH06J026309 Promoter/Enhancer 1.6 ENCODE CraniofacialAtlas dbSUPER 10.5 +109.7 109718 4.9 ZNF221 ARHGAP35 CREB1 GATAD2A TEAD4 ZNF629 TFE3 ZNF512 LEF1 IKZF1 TRQ-TTG3-1 TRQ-TTG3-2 TRS-TGA3-1 TRX-CAT1-3 piR-30961-003 piR-33437-004 ABT1 ZNF322 BTN2A2 BTN2A1
- Elite GeneHancer and/or Elite GeneHancer-gene association Download GeneHancer data from 2017 publication | Request up-to-date GeneHancer data (full dataset)

GeneHancers around RPS10P1 on the GeneHancer Hub at the UCSC Golden Path

Genomic Locations for RPS10P1 Gene

Genomic Locations for RPS10P1 Gene
chr6:26,202,123-26,202,705
(GRCh38/hg38)
Size:
583 bases
Orientation:
Plus strand
chr6:26,202,351-26,202,943
(GRCh37/hg19)
Size:
593 bases
Orientation:
Plus strand

Genomic View for RPS10P1 Gene

Genes around RPS10P1 on UCSC Golden Path with GeneCards custom track

Cytogenetic band:
RPS10P1 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for RPS10P1 Gene
GeneLoc Logo Genomic Neighborhood • Exon Structure • Gene Density

RefSeq DNA sequence for RPS10P1 Gene

Proteins for RPS10P1 Gene

Products:

  1. Antibody
  2. Protein
  3. Assay

Post-translational modifications for RPS10P1 Gene

No Post-translational modifications

No data available for DME Specific Peptides for RPS10P1 Gene

Domains & Families for RPS10P1 Gene

No data available for Gene Families , Protein Domains , Suggested Antigen Peptide Sequences , Graphical View of Domain Structure and UniProtKB/Swiss-Prot for RPS10P1 Gene

Function for RPS10P1 Gene

Products:

  1. Animal Model
  2. CRISPR
  3. miRNA
  4. Inhibitory RNA
  5. Clone
  6. Cell Line

Phenotypes From GWAS Catalog for RPS10P1 Gene

Animal Model Products

CRISPR Products

No data available for Molecular function , Enzyme Numbers (IUBMB) , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for RPS10P1 Gene

Localization for RPS10P1 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS , Subcellular locations from the Human Protein Atlas (HPA) and Gene Ontology (GO) - Cellular Components for RPS10P1 Gene

Pathways & Interactions for RPS10P1 Gene

PathCards logo

SuperPathways for RPS10P1 Gene

No Data Available

Gene Ontology (GO) - Biological Process for RPS10P1 Gene

None

No data available for Pathways by source , Interacting Proteins and SIGNOR curated interactions for RPS10P1 Gene

Drugs & Compounds for RPS10P1 Gene

Products:

  1. Drug
No Compound Related Data Available

Transcripts for RPS10P1 Gene

Products:

  1. CRISPR
  2. miRNA
  3. Inhibitory RNA
  4. Clone

mRNA/cDNA for RPS10P1 Gene

1 Ensembl transcripts including schematic representations, and UCSC links to gene/alias where relevant :

CRISPR Products

Alternative Splicing Database (ASD) splice patterns (SP) for RPS10P1 Gene

No ASD Table

Relevant External Links for RPS10P1 Gene

GeneLoc Exon Structure for
RPS10P1

Expression for RPS10P1 Gene

Products:

  1. Primer

mRNA expression in normal human tissues from GTEx, Illumina, BioGPS, and SAGE for RPS10P1 Gene

mRNA expression in normal human tissues for RPS10P1 Gene
mRNA expression by GTEx for RPS10P1 Gene

mRNA differential expression in normal tissues according to GTEx for RPS10P1 Gene

This gene is overexpressed in Whole Blood (x8.3), Esophagus - Mucosa (x5.8), and Prostate (x4.6).
genes like me logo Genes that share expression patterns with RPS10P1: view

No data available for mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners , mRNA Expression by UniProt/SwissProt , Evidence on tissue expression from TISSUES and Phenotype-based relationships between genes and organs from Gene ORGANizer for RPS10P1 Gene

Orthologs for RPS10P1 Gene

Evolution for RPS10P1 Gene

ENSEMBL:
Gene Tree for RPS10P1 (if available)
TreeFam:
Gene Tree for RPS10P1 (if available)

No data available for Orthologs for RPS10P1 Gene

Paralogs for RPS10P1 Gene

No data available for Paralogs for RPS10P1 Gene

Variants for RPS10P1 Gene

Additional Variant Information for RPS10P1 Gene

SNPedia medical, phenotypic, and genealogical associations of SNPs for
RPS10P1

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Sequence variations, with clinical significance, from ClinVar and Humsavar, with links to dbSNP , Additional dbSNP identifiers (rs#s) , Structural Variations from Database of Genomic Variants (DGV) and Variation tolerance for RPS10P1 Gene

Disorders for RPS10P1 Gene

No disorders were found for RPS10P1 Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot , Genatlas and External Links for RPS10P1 Gene

Publications for RPS10P1 Gene

  1. Comparative analysis of processed ribosomal protein pseudogenes in four mammalian genomes. (PMID: 19123937) Balasubramanian S … Gerstein M (Genome biology 2009) 2 3

ExternalLinks

View latest publications for RPS10P1 gene in Mastermind

Products for RPS10P1 Gene

Sources for RPS10P1 Gene