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Aliases for RPPH1-2P Gene

Subcategory (RNA class) for RPPH1-2P Gene

lncRNA

Aliases for RPPH1-2P Gene

  • Ribonuclease P RNA Component H1, 2 Pseudogene 2 3 5

External Ids for RPPH1-2P Gene

ORGUL Members for RPPH1-2P Gene

Previous GeneCards Identifiers for RPPH1-2P Gene

  • GC14M065378

Summaries for RPPH1-2P Gene

GeneCards Summary for RPPH1-2P Gene

RPPH1-2P (Ribonuclease P RNA Component H1, 2 Pseudogene) is a Pseudogene, and is affiliated with the lncRNA class.

Additional gene information for RPPH1-2P Gene

No data available for Entrez Gene Summary , CIViC summary , UniProtKB/Swiss-Prot , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , fRNAdb sequence ontologies and piRNA Summary for RPPH1-2P Gene

Genomics for RPPH1-2P Gene

GeneHancer (GH) Regulatory Elements for RPPH1-2P Gene

Promoters and enhancers for RPPH1-2P Gene
GeneHancer (GH) Identifier GH Type GH
Score
GH Sources Gene Association Score Total Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor
Binding Sites
Gene Targets
GH14I064937 Promoter/Enhancer 1.7 EPDnew Ensembl ENCODE 11.4 -31.2 -31227 6 FOXA2 MLX ARID4B DMAP1 YY1 TCF12 PAF1 RXRA SP5 MXD4 GPX2 GC14M064940 CHURC1 CHURC1-FNTB RPPH1-2P RAB15 SPTB
GH14I064822 Promoter/Enhancer 1.7 EPDnew Ensembl ENCODE dbSUPER 11.2 +83.6 83600 7.9 PKNOX1 SIN3A ZNF2 IRF4 ZNF48 RAD21 TCF12 GLIS2 ARID2 ZNF143 SPTB CHURC1 RPPH1-2P CHURC1-FNTB GPX2 RAB15 PIR49393 GC14M064872
GH14I064754 Enhancer 1.4 FANTOM5 Ensembl ENCODE dbSUPER 10.5 +152.1 152081 5.5 KLF17 RAD21 GLIS2 ZNF143 RCOR1 FOS DEK ZNF654 USF2 CEBPB CHURC1 PLEKHG3 PPP1R36 RPPH1-2P CHURC1-FNTB GPX2 SPTB ZBTB1 GC14P064746 PIR60020
GH14I064812 Enhancer 0.9 Ensembl ENCODE dbSUPER 11.1 +97.0 97035 0.9 GLIS1 ZNF629 ZNF10 CREB1 WT1 RPPH1-2P CHURC1 CHURC1-FNTB GPX2 PPP1R36 PIR49393 GC14M064872 SPTB
GH14I065002 Enhancer 0.9 Ensembl ENCODE 10.8 -93.3 -93297 1 SMARCA5 MEIS2 PKNOX1 JUNB EBF1 ELF1 BATF ATF2 IRF4 FOXK2 ENSG00000272158 GPX2 CHURC1 CHURC1-FNTB RPPH1-2P FNTB GC14P064987
- Elite GeneHancer and/or Elite GeneHancer-gene association Download GeneHancer data dump

GeneHancers around RPPH1-2P on UCSC Golden Path with GeneCards custom track

Genomic Locations for RPPH1-2P Gene

Genomic Locations for RPPH1-2P Gene
chr14:64,909,488-64,909,780
(GRCh38/hg38)
Size:
293 bases
Orientation:
Minus strand
chr14:65,376,206-65,376,498
(GRCh37/hg19)

Genomic View for RPPH1-2P Gene

Genes around RPPH1-2P on UCSC Golden Path with GeneCards custom track

Cytogenetic band:
RPPH1-2P Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for RPPH1-2P Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

RefSeq DNA sequence for RPPH1-2P Gene

Proteins for RPPH1-2P Gene

Post-translational modifications for RPPH1-2P Gene

No Post-translational modifications

No data available for DME Specific Peptides for RPPH1-2P Gene

Domains & Families for RPPH1-2P Gene

Graphical View of Domain Structure for InterPro Entry

No data available for Gene Families , Protein Domains , Suggested Antigen Peptide Sequences and UniProtKB/Swiss-Prot for RPPH1-2P Gene

Function for RPPH1-2P Gene

Phenotypes From GWAS Catalog for RPPH1-2P Gene

Animal Model Products

No data available for Molecular function , Enzyme Numbers (IUBMB) , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for RPPH1-2P Gene

Localization for RPPH1-2P Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS , Subcellular locations from the Human Protein Atlas (HPA) and Gene Ontology (GO) - Cellular Components for RPPH1-2P Gene

Pathways & Interactions for RPPH1-2P Gene

SuperPathways for RPPH1-2P Gene

No Data Available

Interacting Proteins for RPPH1-2P Gene

Gene Ontology (GO) - Biological Process for RPPH1-2P Gene

None

No data available for Pathways by source and SIGNOR curated interactions for RPPH1-2P Gene

Drugs & Compounds for RPPH1-2P Gene

No Compound Related Data Available

Transcripts for RPPH1-2P Gene

mRNA/cDNA for RPPH1-2P Gene

(1) Ensembl transcripts including schematic representations, and UCSC links where relevant :

Alternative Splicing Database (ASD) splice patterns (SP) for RPPH1-2P Gene

No ASD Table

Relevant External Links for RPPH1-2P Gene

GeneLoc Exon Structure for
RPPH1-2P
ECgene alternative splicing isoforms for
RPPH1-2P

Expression for RPPH1-2P Gene

mRNA expression in normal human tissues from GTEx, Illumina, BioGPS, and CGAP SAGE for RPPH1-2P Gene

genes like me logo Genes that share expression patterns with RPPH1-2P: view

No data available for mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , mRNA differential expression in normal tissues , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners , mRNA Expression by UniProt/SwissProt , Evidence on tissue expression from TISSUES and Phenotype-based relationships between genes and organs from Gene ORGANizer for RPPH1-2P Gene

Orthologs for RPPH1-2P Gene

This gene was present in the common ancestor of chordates.

Orthologs for RPPH1-2P Gene

Organism Taxonomy Gene Similarity Type Details
chimpanzee
(Pan troglodytes)
Mammalia RNaseP_nuc 34
  • 93 (a)
OneToOne
cow
(Bos Taurus)
Mammalia RNaseP_nuc 34
  • 41 (a)
ManyToMany
oppossum
(Monodelphis domestica)
Mammalia RNaseP_nuc 34
  • 41 (a)
OneToMany
dog
(Canis familiaris)
Mammalia RNaseP_nuc 34
  • 31 (a)
OneToOne
mouse
(Mus musculus)
Mammalia Gm22817 34
  • 31 (a)
OneToOne
chicken
(Gallus gallus)
Aves RNaseP_nuc 34
  • 40 (a)
OneToMany
lizard
(Anolis carolinensis)
Reptilia RNaseP_nuc 34 34
  • 37 (a)
ManyToMany
zebrafish
(Danio rerio)
Actinopterygii RNaseP_nuc 34 34 34 34
  • 44 (a)
ManyToMany
sea squirt
(Ciona savignyi)
Ascidiacea RNaseP_nuc 34 34
  • 35 (a)
ManyToMany
Species where no ortholog for RPPH1-2P was found in the sources mined by GeneCards:
  • A. gosspyii yeast (Ashbya gossypii)
  • Actinobacteria (Mycobacterium tuberculosis)
  • African clawed frog (Xenopus laevis)
  • African malaria mosquito (Anopheles gambiae)
  • Alicante grape (Vitis vinifera)
  • alpha proteobacteria (Wolbachia pipientis)
  • amoeba (Dictyostelium discoideum)
  • Archea (Pyrococcus horikoshii)
  • baker's yeast (Saccharomyces cerevisiae)
  • barley (Hordeum vulgare)
  • beta proteobacteria (Neisseria meningitidis)
  • bread mold (Neurospora crassa)
  • Chromalveolata (Phytophthora infestans)
  • common water flea (Daphnia pulex)
  • corn (Zea mays)
  • E. coli (Escherichia coli)
  • filamentous fungi (Aspergillus nidulans)
  • Firmicute bacteria (Streptococcus pneumoniae)
  • fission yeast (Schizosaccharomyces pombe)
  • fruit fly (Drosophila melanogaster)
  • green algae (Chlamydomonas reinhardtii)
  • honey bee (Apis mellifera)
  • K. lactis yeast (Kluyveromyces lactis)
  • loblloly pine (Pinus taeda)
  • malaria parasite (Plasmodium falciparum)
  • medicago trunc (Medicago Truncatula)
  • moss (Physcomitrella patens)
  • orangutan (Pongo pygmaeus)
  • pig (Sus scrofa)
  • platypus (Ornithorhynchus anatinus)
  • rainbow trout (Oncorhynchus mykiss)
  • rat (Rattus norvegicus)
  • rice (Oryza sativa)
  • rice blast fungus (Magnaporthe grisea)
  • schistosome parasite (Schistosoma mansoni)
  • sea anemone (Nematostella vectensis)
  • sea urchin (Strongylocentrotus purpuratus)
  • sorghum (Sorghum bicolor)
  • soybean (Glycine max)
  • stem rust fungus (Puccinia graminis)
  • sugarcane (Saccharum officinarum)
  • thale cress (Arabidopsis thaliana)
  • tomato (Lycopersicon esculentum)
  • toxoplasmosis (Toxoplasma gondii)
  • Trichoplax (Trichoplax adhaerens)
  • tropical clawed frog (Silurana tropicalis)
  • wheat (Triticum aestivum)
  • worm (Caenorhabditis elegans)

Evolution for RPPH1-2P Gene

ENSEMBL:
Gene Tree for RPPH1-2P (if available)
TreeFam:
Gene Tree for RPPH1-2P (if available)

Paralogs for RPPH1-2P Gene

No data available for Paralogs for RPPH1-2P Gene

Variants for RPPH1-2P Gene

Additional Variant Information for RPPH1-2P Gene

SNPedia medical, phenotypic, and genealogical associations of SNPs for
RPPH1-2P

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Sequence variations from dbSNP and Humsavar , Structural Variations from Database of Genomic Variants (DGV) and Variation tolerance for RPPH1-2P Gene

Disorders for RPPH1-2P Gene

No disorders were found for RPPH1-2P Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot , Genatlas and External Links for RPPH1-2P Gene

Publications for RPPH1-2P Gene

No publications were found for RPPH1-2P Gene.

Products for RPPH1-2P Gene

Sources for RPPH1-2P Gene

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