Free for academic non-profit institutions. Other users need a Commercial license

Aliases for RPLP2P5 Gene

Aliases for RPLP2P5 Gene

  • Ribosomal Protein Lateral Stalk Subunit P2 Pseudogene 5 2 3
  • Ribosomal Protein, Large, P2 Pseudogene 5 2 3
  • RPLP2_4_1568 3
  • AC008026.2 5

External Ids for RPLP2P5 Gene

Previous GeneCards Identifiers for RPLP2P5 Gene

  • GC17U901167
  • GC17P060458

Summaries for RPLP2P5 Gene

GeneCards Summary for RPLP2P5 Gene

RPLP2P5 (Ribosomal Protein Lateral Stalk Subunit P2 Pseudogene 5) is a Pseudogene.

Additional gene information for RPLP2P5 Gene

No data available for Entrez Gene Summary , CIViC summary , UniProtKB/Swiss-Prot , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , fRNAdb sequence ontologies and piRNA Summary for RPLP2P5 Gene

Genomics for RPLP2P5 Gene

GeneHancer (GH) Regulatory Elements for RPLP2P5 Gene

Promoters and enhancers for RPLP2P5 Gene
GeneHancer (GH) Identifier GH Type GH
Score
GH Sources Gene Association Score Total Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor
Binding Sites
Gene Targets
GH17I062380 Promoter 0.6 EPDnew 550.8 -1.1 -1059 0.1 MNT RPLP2P5 LOC105371854 EFCAB3
GH17I062381 Promoter 0.6 EPDnew 550.8 +0.2 157 0.1 YBX1 RNU7-52P RPLP2P5 LOC105371854 GC17P062384 EFCAB3
GH17I062163 Enhancer 1 ENCODE 11.2 -216.7 -216672 3.1 PKNOX1 FOXA2 MLX NEUROD1 SIN3A ZBTB7B IRF4 YY1 GTF3C2 TCF12 MED13 RPS10P26 EFCAB3 RNU7-52P RPLP2P5 RPS23P7 POLRMTP1 GC17P062238
GH17I062092 Enhancer 1 Ensembl ENCODE 10 -287.8 -287818 1.9 HDGF PKNOX1 FOXA2 BMI1 BATF KLF5 IRF4 YY1 ATF7 RCOR1 EFCAB3 RNU7-52P RPLP2P5 RPS23P7 NACA2 MED13 GC17P062102
GH17I062095 Enhancer 0.4 ENCODE 10 -285.8 -285761 0.2 ZNF8 HNF4A YY1 EFCAB3 RNU7-52P RPLP2P5 RPS23P7 NACA2 GC17P062102 MED13
- Elite GeneHancer and/or Elite GeneHancer-gene association Download GeneHancer data dump

GeneHancers around RPLP2P5 on UCSC Golden Path with GeneCards custom track

Genomic Locations for RPLP2P5 Gene

Genomic Locations for RPLP2P5 Gene
chr17:62,381,596-62,382,052
(GRCh38/hg38)
Size:
457 bases
Orientation:
Plus strand
chr17:60,458,957-60,459,433
(GRCh37/hg19)

Genomic View for RPLP2P5 Gene

Genes around RPLP2P5 on UCSC Golden Path with GeneCards custom track

Cytogenetic band:
RPLP2P5 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for RPLP2P5 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

RefSeq DNA sequence for RPLP2P5 Gene

Proteins for RPLP2P5 Gene

Post-translational modifications for RPLP2P5 Gene

No Post-translational modifications

No data available for DME Specific Peptides for RPLP2P5 Gene

Domains & Families for RPLP2P5 Gene

Graphical View of Domain Structure for InterPro Entry

No data available for Gene Families , Protein Domains , Suggested Antigen Peptide Sequences and UniProtKB/Swiss-Prot for RPLP2P5 Gene

Function for RPLP2P5 Gene

Animal Model Products

Clone Products

No data available for Molecular function , Enzyme Numbers (IUBMB) , Phenotypes From GWAS Catalog , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for RPLP2P5 Gene

Localization for RPLP2P5 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS , Subcellular locations from the Human Protein Atlas (HPA) and Gene Ontology (GO) - Cellular Components for RPLP2P5 Gene

Pathways & Interactions for RPLP2P5 Gene

SuperPathways for RPLP2P5 Gene

No Data Available

Interacting Proteins for RPLP2P5 Gene

Gene Ontology (GO) - Biological Process for RPLP2P5 Gene

None

No data available for Pathways by source and SIGNOR curated interactions for RPLP2P5 Gene

Drugs & Compounds for RPLP2P5 Gene

No Compound Related Data Available

Transcripts for RPLP2P5 Gene

mRNA/cDNA for RPLP2P5 Gene

(1) Ensembl transcripts including schematic representations, and UCSC links where relevant :

Clone Products

Alternative Splicing Database (ASD) splice patterns (SP) for RPLP2P5 Gene

No ASD Table

Relevant External Links for RPLP2P5 Gene

GeneLoc Exon Structure for
RPLP2P5
ECgene alternative splicing isoforms for
RPLP2P5

Expression for RPLP2P5 Gene

mRNA expression in normal human tissues from GTEx, Illumina, BioGPS, and CGAP SAGE for RPLP2P5 Gene

mRNA differential expression in normal tissues according to GTEx for RPLP2P5 Gene

This gene is overexpressed in Testis (x53.0).

NURSA nuclear receptor signaling pathways regulating expression of RPLP2P5 Gene:

RPLP2P5
genes like me logo Genes that share expression patterns with RPLP2P5: view

No data available for mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners , mRNA Expression by UniProt/SwissProt , Evidence on tissue expression from TISSUES and Phenotype-based relationships between genes and organs from Gene ORGANizer for RPLP2P5 Gene

Orthologs for RPLP2P5 Gene

Evolution for RPLP2P5 Gene

ENSEMBL:
Gene Tree for RPLP2P5 (if available)
TreeFam:
Gene Tree for RPLP2P5 (if available)

No data available for Orthologs for RPLP2P5 Gene

Paralogs for RPLP2P5 Gene

No data available for Paralogs for RPLP2P5 Gene

Variants for RPLP2P5 Gene

Additional Variant Information for RPLP2P5 Gene

SNPedia medical, phenotypic, and genealogical associations of SNPs for
RPLP2P5

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Sequence variations from dbSNP and Humsavar , Structural Variations from Database of Genomic Variants (DGV) and Variation tolerance for RPLP2P5 Gene

Disorders for RPLP2P5 Gene

No disorders were found for RPLP2P5 Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot , Genatlas and External Links for RPLP2P5 Gene

Publications for RPLP2P5 Gene

  1. Comparative analysis of processed ribosomal protein pseudogenes in four mammalian genomes. (PMID: 19123937) Balasubramanian S … Gerstein M (Genome biology 2009) 2 3 58

Products for RPLP2P5 Gene

Sources for RPLP2P5 Gene

Content
Loading form....