Aliases for RPLP1P10 Gene

Aliases for RPLP1P10 Gene

  • Ribosomal Protein Lateral Stalk Subunit P1 Pseudogene 10 2 3 5
  • Ribosomal Protein, Large, P1 Pseudogene 10 2 3
  • RPLP1_6_1047 3

External Ids for RPLP1P10 Gene

Previous GeneCards Identifiers for RPLP1P10 Gene

  • GC10U901113
  • GC10M060849

Summaries for RPLP1P10 Gene

GeneCards Summary for RPLP1P10 Gene

RPLP1P10 (Ribosomal Protein Lateral Stalk Subunit P1 Pseudogene 10) is a Pseudogene.

Additional gene information for RPLP1P10 Gene

No data available for Entrez Gene Summary , CIViC Summary , UniProtKB/Swiss-Prot Summary , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , Rfam classification and piRNA Summary for RPLP1P10 Gene

Genomics for RPLP1P10 Gene

GeneHancer (GH) Regulatory Elements for RPLP1P10 Gene

Promoters and enhancers for RPLP1P10 Gene
GeneHancer (GH) Identifier GH Type GH
Score
GH Sources Gene Association Score Total Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor
Binding Sites
Gene Targets
GH10J059079 Enhancer 0.9 Ensembl ENCODE 0.4 +9.2 9238 1.6 JUND FOS BCL11A CTCF FOSL2 MAFK JUN ZNF511 ZNF189 RAD21 lnc-FAM13C-4 RPLP1P10 LOC102724768
GH10J059098 Enhancer 0.9 Ensembl ENCODE CraniofacialAtlas 0.4 -10.6 -10615 2.6 NR2F2 NFIC POLR2A RCOR1 NFIB SMARCA4 NFIA CHD2 YY1 RAD21 RPLP1P10 lnc-FAM13C-4 TRAF6P1 lnc-FAM13C-3
GH10J059072 Enhancer 0.9 ENCODE 0.4 +15.3 15262 2 EP300 FOXK2 TCF12 POLR2G NCOR1 KDM6A TCF7 FOXA1 ZBTB25 TGIF2 lnc-FAM13C-4 RPLP1P10 LOC102724768
GH10J059108 Enhancer 0.8 Ensembl ENCODE 0.4 -20.0 -20007 1.3 TCF7 TEAD1 MEF2B CREM FOXP1 EBF1 IKZF1 KDM1A NFIL3 ARID3A PHYHIPL lnc-FAM13C-4 RPLP1P10 lnc-FAM13C-3 TRAF6P1
GH10J059085 Enhancer 0.4 Ensembl 0.7 +3.4 3438 1.2 PRDM1 IKZF1 MTA2 IKZF2 PHYHIPL RPLP1P10 lnc-FAM13C-4 LOC102724768
- Elite GeneHancer and/or Elite GeneHancer-gene association Download GeneHancer data from 2017 publication | Request up-to-date GeneHancer data (full dataset)

GeneHancers around RPLP1P10 on UCSC Golden Path with GeneCards custom track

Genomic Locations for RPLP1P10 Gene

Genomic Locations for RPLP1P10 Gene
chr10:59,088,661-59,089,039
(GRCh38/hg38)
Size:
379 bases
Orientation:
Minus strand
chr10:60,848,456-60,848,799
(GRCh37/hg19)
Size:
344 bases
Orientation:
Minus strand

Genomic View for RPLP1P10 Gene

Genes around RPLP1P10 on UCSC Golden Path with GeneCards custom track

Cytogenetic band:
RPLP1P10 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for RPLP1P10 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

RefSeq DNA sequence for RPLP1P10 Gene

Proteins for RPLP1P10 Gene

Post-translational modifications for RPLP1P10 Gene

No Post-translational modifications

No data available for DME Specific Peptides for RPLP1P10 Gene

Domains & Families for RPLP1P10 Gene

No data available for Gene Families , Protein Domains , Suggested Antigen Peptide Sequences , Graphical View of Domain Structure and UniProtKB/Swiss-Prot for RPLP1P10 Gene

Function for RPLP1P10 Gene

Animal Model Products

CRISPR Products

No data available for Molecular function , Enzyme Numbers (IUBMB) , Phenotypes From GWAS Catalog , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for RPLP1P10 Gene

Localization for RPLP1P10 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS , Subcellular locations from the Human Protein Atlas (HPA) and Gene Ontology (GO) - Cellular Components for RPLP1P10 Gene

Pathways & Interactions for RPLP1P10 Gene

PathCards logo

SuperPathways for RPLP1P10 Gene

No Data Available
;

Gene Ontology (GO) - Biological Process for RPLP1P10 Gene

None

No data available for Pathways by source , Interacting Proteins and SIGNOR curated interactions for RPLP1P10 Gene

Drugs & Compounds for RPLP1P10 Gene

No Compound Related Data Available

Transcripts for RPLP1P10 Gene

mRNA/cDNA for RPLP1P10 Gene

1 Ensembl transcripts including schematic representations, and UCSC links to gene/alias where relevant :

CRISPR Products

Alternative Splicing Database (ASD) splice patterns (SP) for RPLP1P10 Gene

No ASD Table

Relevant External Links for RPLP1P10 Gene

GeneLoc Exon Structure for
RPLP1P10

Expression for RPLP1P10 Gene

mRNA expression in normal human tissues from GTEx, Illumina, BioGPS, and SAGE for RPLP1P10 Gene

genes like me logo Genes that share expression patterns with RPLP1P10: view

No data available for mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , mRNA differential expression in normal tissues , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners , mRNA Expression by UniProt/SwissProt , Evidence on tissue expression from TISSUES and Phenotype-based relationships between genes and organs from Gene ORGANizer for RPLP1P10 Gene

Orthologs for RPLP1P10 Gene

Evolution for RPLP1P10 Gene

ENSEMBL:
Gene Tree for RPLP1P10 (if available)
TreeFam:
Gene Tree for RPLP1P10 (if available)

No data available for Orthologs for RPLP1P10 Gene

Paralogs for RPLP1P10 Gene

No data available for Paralogs for RPLP1P10 Gene

Variants for RPLP1P10 Gene

Additional Variant Information for RPLP1P10 Gene

SNPedia medical, phenotypic, and genealogical associations of SNPs for
RPLP1P10

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Sequence variations, with clinical significance, from ClinVar and Humsavar, with links to dbSNP , Additional dbSNP identifiers (rs#s) , Structural Variations from Database of Genomic Variants (DGV) and Variation tolerance for RPLP1P10 Gene

Disorders for RPLP1P10 Gene

Additional Disease Information for RPLP1P10

Genetic Association Database
(GAD)

No disorders were found for RPLP1P10 Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot and Genatlas for RPLP1P10 Gene

Publications for RPLP1P10 Gene

  1. Comparative analysis of processed ribosomal protein pseudogenes in four mammalian genomes. (PMID: 19123937) Balasubramanian S … Gerstein M (Genome biology 2009) 2 3 54
  2. Framingham Heart Study 100K Project: genome-wide associations for blood pressure and arterial stiffness. (PMID: 17903302) Levy D … Mitchell GF (BMC medical genetics 2007) 41 54

No data available for Mastermind for RPLP1P10 Gene

Products for RPLP1P10 Gene

Sources for RPLP1P10 Gene