Aliases for RPLP0P9 Gene

Aliases for RPLP0P9 Gene

  • Ribosomal Protein Lateral Stalk Subunit P0 Pseudogene 3

External Ids for RPLP0P9 Gene

Previous GeneCards Identifiers for RPLP0P9 Gene

  • GC05P165741
  • GC05P165810

Summaries for RPLP0P9 Gene

GeneCards Summary for RPLP0P9 Gene

RPLP0P9 (Ribosomal Protein Lateral Stalk Subunit P0 Pseudogene) is a Pseudogene.

Additional gene information for RPLP0P9 Gene

No data available for Entrez Gene Summary , CIViC Summary , UniProtKB/Swiss-Prot Summary , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , Rfam classification and piRNA Summary for RPLP0P9 Gene

Genomics for RPLP0P9 Gene

GeneHancer (GH) Regulatory Elements for RPLP0P9 Gene

Promoters and enhancers for RPLP0P9 Gene
GeneHancer (GH) Identifier GH Type GH
Score
GH Sources Gene Association Score Total Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor
Binding Sites
Gene Targets
GH05J166382 Enhancer 0.5 Ensembl 500.7 0.0 -5 0.2 CEBPG CTCF ATF4 RAD21 ATF3 CEBPB JUND FOXA1 ENSG00000229119 RPLP0P9 piR-38051-232
GH05J166429 Enhancer 0.8 ENCODE dbSUPER 0.3 +48.3 48311 2.6 TEAD4 HDAC2 YY1 NANOG TCF12 JUN JUND CHD7 EP300 SP1 ENSG00000229119 RPLP0P9 piR-46847-214
GH05J166368 Enhancer 0.4 Ensembl 0.4 -12.8 -12804 1.4 FOXA1 TAF1 SMARCA4 GATA3 EZH2 RPLP0P9 ENSG00000229119 piR-38051-232
GH05J166342 Enhancer 0.5 Ensembl 0.3 -39.4 -39405 1.8 CTCF POLR2A SMARCA4 RAD21 CEBPB EZH2 RPLP0P9 ENSG00000229119 piR-38051-232
GH05J166399 Enhancer 0.3 Ensembl 0.4 +17.6 17596 0.2 FOXA1 RPLP0P9 ENSG00000229119 piR-46847-214
- Elite GeneHancer and/or Elite GeneHancer-gene association Download GeneHancer data from 2017 publication | Request up-to-date GeneHancer data (full dataset)

GeneHancers around RPLP0P9 on UCSC Golden Path with GeneCards custom track

Genomic Locations for RPLP0P9 Gene

Genomic Locations for RPLP0P9 Gene
chr5:166,382,305-166,382,686
(GRCh38/hg38)
Size:
382 bases
Orientation:
Plus strand
chr5:165,809,310-165,809,691
(GRCh37/hg19)
Size:
382 bases
Orientation:
Plus strand

Genomic View for RPLP0P9 Gene

Genes around RPLP0P9 on UCSC Golden Path with GeneCards custom track

Cytogenetic band:
RPLP0P9 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for RPLP0P9 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

RefSeq DNA sequence for RPLP0P9 Gene

Proteins for RPLP0P9 Gene

Post-translational modifications for RPLP0P9 Gene

No Post-translational modifications

No data available for DME Specific Peptides for RPLP0P9 Gene

Domains & Families for RPLP0P9 Gene

No data available for Gene Families , Protein Domains , Suggested Antigen Peptide Sequences , Graphical View of Domain Structure and UniProtKB/Swiss-Prot for RPLP0P9 Gene

Function for RPLP0P9 Gene

Phenotypes From GWAS Catalog for RPLP0P9 Gene

No data available for Molecular function , Enzyme Numbers (IUBMB) , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for RPLP0P9 Gene

Localization for RPLP0P9 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS , Subcellular locations from the Human Protein Atlas (HPA) and Gene Ontology (GO) - Cellular Components for RPLP0P9 Gene

Pathways & Interactions for RPLP0P9 Gene

PathCards logo

SuperPathways for RPLP0P9 Gene

No Data Available
;

Gene Ontology (GO) - Biological Process for RPLP0P9 Gene

None

No data available for Pathways by source , Interacting Proteins and SIGNOR curated interactions for RPLP0P9 Gene

Drugs & Compounds for RPLP0P9 Gene

No Compound Related Data Available

Transcripts for RPLP0P9 Gene

Alternative Splicing Database (ASD) splice patterns (SP) for RPLP0P9 Gene

No ASD Table

Relevant External Links for RPLP0P9 Gene

GeneLoc Exon Structure for
RPLP0P9

No data available for mRNA/cDNA for RPLP0P9 Gene

Expression for RPLP0P9 Gene

mRNA expression in normal human tissues from GTEx, Illumina, BioGPS, and SAGE for RPLP0P9 Gene

Protein differential expression in normal tissues from HIPED for RPLP0P9 Gene

This gene is overexpressed in Lung (20.4), Saliva (17.6), Heart (17.4), and Brain (9.0).

Integrated Proteomics: protein expression in normal tissues and cell lines from MOPED for RPLP0P9 Gene



Protein tissue co-expression partners for RPLP0P9 Gene

- Elite partner
genes like me logo Genes that share expression patterns with RPLP0P9: view

Primer Products

No data available for mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , mRNA differential expression in normal tissues , mRNA Expression by UniProt/SwissProt , Evidence on tissue expression from TISSUES and Phenotype-based relationships between genes and organs from Gene ORGANizer for RPLP0P9 Gene

Orthologs for RPLP0P9 Gene

No data available for Orthologs and Evolution for RPLP0P9 Gene

Paralogs for RPLP0P9 Gene

No data available for Paralogs for RPLP0P9 Gene

Variants for RPLP0P9 Gene

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Sequence variations, with clinical significance, from ClinVar and Humsavar, with links to dbSNP , Additional dbSNP identifiers (rs#s) , Structural Variations from Database of Genomic Variants (DGV) , Variation tolerance and Additional Variant Information for RPLP0P9 Gene

Disorders for RPLP0P9 Gene

Additional Disease Information for RPLP0P9

Genetic Association Database
(GAD)

No disorders were found for RPLP0P9 Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot and Genatlas for RPLP0P9 Gene

Publications for RPLP0P9 Gene

  1. Genome-wide mapping for clinically relevant predictors of lamotrigine- and phenytoin-induced hypersensitivity reactions. (PMID: 22379998) McCormack M … Cavalleri GL (Pharmacogenomics 2012) 41 54
  2. Genome-wide association study of conduct disorder symptomatology. (PMID: 20585324) Dick DM … Bierut L (Molecular psychiatry 2011) 41 54
  3. Genome-wide association with bone mass and geometry in the Framingham Heart Study. (PMID: 17903296) Kiel DP … Karasik D (BMC medical genetics 2007) 41 54
  4. A genome-wide association for kidney function and endocrine-related traits in the NHLBI's Framingham Heart Study. (PMID: 17903292) Hwang SJ … Fox CS (BMC medical genetics 2007) 41 54
  5. Generation and initial analysis of more than 15,000 full-length human and mouse cDNA sequences. (PMID: 12477932) Strausberg RL … Mammalian Gene Collection Program Team (Proceedings of the National Academy of Sciences of the United States of America 2002) 3 54

No data available for Mastermind for RPLP0P9 Gene

Products for RPLP0P9 Gene

Sources for RPLP0P9 Gene