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Aliases for RPL9P7 Gene

Aliases for RPL9P7 Gene

  • Ribosomal Protein L9 Pseudogene 7 2 3 5
  • Ribosomal Protein L9 Pseudogene 1 2 3
  • Ribosomal Protein L9-Like 1 2 3
  • 60S Ribosomal Protein L9 Pseudogene 1 3
  • Large Ribosomal Subunit Protein UL6 4
  • RPL9 RPL9P7 RPL9P8 RPL9P9 4
  • RPL9_19_1768 3
  • RPL9L1 3
  • RPL9P1 3

External Ids for RPL9P7 Gene

Previous HGNC Symbols for RPL9P7 Gene

  • RPL9P1
  • RPL9L1

Previous GeneCards Identifiers for RPL9P7 Gene

  • GC0XM023614
  • GC0XM023764

Summaries for RPL9P7 Gene

GeneCards Summary for RPL9P7 Gene

RPL9P7 (Ribosomal Protein L9 Pseudogene 7) is a Pseudogene.

Additional gene information for RPL9P7 Gene

No data available for Entrez Gene Summary , CIViC summary , UniProtKB/Swiss-Prot , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , fRNAdb sequence ontologies and piRNA Summary for RPL9P7 Gene

Genomics for RPL9P7 Gene

GeneHancer (GH) Regulatory Elements for RPL9P7 Gene

Promoters and enhancers for RPL9P7 Gene
GeneHancer (GH) Identifier GH Type GH
Score
GH Sources Gene Association Score Total Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor
Binding Sites
Gene Targets
GH0XI023837 Promoter 0.5 Ensembl 550.8 +0.1 145 0.4 PIR55228 RPL9P7 PIR60902 APOO
GH0XI024144 Promoter/Enhancer 2.3 EPDnew Ensembl ENCODE 66.3 -311.8 -311800 9.7 PKNOX1 FOXA2 ARNT ZFP64 ARID4B SIN3A FEZF1 ZNF2 YY1 ZNF213 ZFX ZFX-AS1 POLA1 RPL9P7
GH0XI024143 Enhancer 0.8 ENCODE 51.8 -306.3 -306345 0.7 ZNF493 ZNF529 ZFP64 ZEB1 ZNF155 ZNF302 ZNF354C KLF7 ZNF214 SP3 RPL9P7 POLA1 ZFX ENSG00000201407
GH0XI023780 Promoter/Enhancer 2.6 EPDnew FANTOM5 Ensembl ENCODE 15.1 +51.6 51611 10.4 FEZF1 IRF4 YY1 ZNF213 ZNF143 SP3 NFYC MEF2D SSRP1 ZNF610 SAT1 GC0XP023786 GC0XP023785 RPL9P7 POLA1 ACOT9 EIF2S3 ZFX ENSG00000202272 LOC105373148
GH0XI023741 Promoter/Enhancer 2 EPDnew Ensembl ENCODE 12.8 +94.6 94561 2.7 HDGF PKNOX1 ARID4B SIN3A FEZF1 DMAP1 POLR2B ZNF213 ZNF143 SP3 ACOT9 POLA1 RPL9P7 ZFX LOC105373148 PRDX4
- Elite GeneHancer and/or Elite GeneHancer-gene association Download GeneHancer data dump

GeneHancers around RPL9P7 on UCSC Golden Path with GeneCards custom track

Genomic Locations for RPL9P7 Gene

Genomic Locations for RPL9P7 Gene
chrX:23,836,644-23,837,346
(GRCh38/hg38)
Size:
703 bases
Orientation:
Minus strand
chrX:23,854,761-23,855,463
(GRCh37/hg19)

Genomic View for RPL9P7 Gene

Genes around RPL9P7 on UCSC Golden Path with GeneCards custom track

Cytogenetic band:
RPL9P7 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for RPL9P7 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

RefSeq DNA sequence for RPL9P7 Gene

Proteins for RPL9P7 Gene

  • Protein details for RPL9P7 Gene (UniProtKB/Swiss-Prot)

    Protein Symbol:
    P32969-RL9_HUMAN
    Recommended name:
    60S ribosomal protein L9
    Protein Accession:
    P32969

    Protein attributes for RPL9P7 Gene

    Size:
    192 amino acids
    Molecular mass:
    21863 Da
    Quaternary structure:
    No Data Available

    Three dimensional structures from OCA and Proteopedia for RPL9P7 Gene

neXtProt entry for RPL9P7 Gene

Post-translational modifications for RPL9P7 Gene

  • Ubiquitination at Lys2, Lys21, isoforms=174, and isoforms=184

No data available for DME Specific Peptides for RPL9P7 Gene

Domains & Families for RPL9P7 Gene

Graphical View of Domain Structure for InterPro Entry

P32969

UniProtKB/Swiss-Prot:

RL9_HUMAN :
  • Belongs to the universal ribosomal protein uL6 family.
Family:
  • Belongs to the universal ribosomal protein uL6 family.
genes like me logo Genes that share domains with RPL9P7: view

No data available for Gene Families and Suggested Antigen Peptide Sequences for RPL9P7 Gene

Function for RPL9P7 Gene

Animal Model Products

Clone Products

No data available for Molecular function , Enzyme Numbers (IUBMB) , Phenotypes From GWAS Catalog , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for RPL9P7 Gene

Localization for RPL9P7 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS , Subcellular locations from the Human Protein Atlas (HPA) and Gene Ontology (GO) - Cellular Components for RPL9P7 Gene

Drugs & Compounds for RPL9P7 Gene

No Compound Related Data Available

Transcripts for RPL9P7 Gene

mRNA/cDNA for RPL9P7 Gene

(1) Ensembl transcripts including schematic representations, and UCSC links where relevant :

Clone Products

Alternative Splicing Database (ASD) splice patterns (SP) for RPL9P7 Gene

No ASD Table

Relevant External Links for RPL9P7 Gene

GeneLoc Exon Structure for
RPL9P7
ECgene alternative splicing isoforms for
RPL9P7

Expression for RPL9P7 Gene

mRNA expression in normal human tissues from GTEx, Illumina, BioGPS, and CGAP SAGE for RPL9P7 Gene

Protein differential expression in normal tissues from HIPED for RPL9P7 Gene

This gene is overexpressed in Tlymphocyte (11.7).

Integrated Proteomics: protein expression in normal tissues and cell lines from ProteomicsDB, MaxQB, and MOPED for RPL9P7 Gene



Protein tissue co-expression partners for RPL9P7 Gene

- Elite partner

NURSA nuclear receptor signaling pathways regulating expression of RPL9P7 Gene:

RPL9P7
genes like me logo Genes that share expression patterns with RPL9P7: view

No data available for mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , mRNA differential expression in normal tissues , mRNA Expression by UniProt/SwissProt , Evidence on tissue expression from TISSUES and Phenotype-based relationships between genes and organs from Gene ORGANizer for RPL9P7 Gene

Orthologs for RPL9P7 Gene

Evolution for RPL9P7 Gene

ENSEMBL:
Gene Tree for RPL9P7 (if available)
TreeFam:
Gene Tree for RPL9P7 (if available)

No data available for Orthologs for RPL9P7 Gene

Paralogs for RPL9P7 Gene

(1) SIMAP similar genes for RPL9P7 Gene using alignment to 1 proteins:

genes like me logo Genes that share paralogs with RPL9P7: view

No data available for Paralogs for RPL9P7 Gene

Variants for RPL9P7 Gene

Additional Variant Information for RPL9P7 Gene

SNPedia medical, phenotypic, and genealogical associations of SNPs for
RPL9P7

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Sequence variations from dbSNP and Humsavar , Structural Variations from Database of Genomic Variants (DGV) and Variation tolerance for RPL9P7 Gene

Disorders for RPL9P7 Gene

No disorders were found for RPL9P7 Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot , Genatlas and External Links for RPL9P7 Gene

Publications for RPL9P7 Gene

  1. Structural organization and chromosomal localization of the human ribosomal protein L9 gene. (PMID: 8597601) Mazuruk K … Rodriguez IR (Biochimica et biophysica acta 1996) 2 3 4 58
  2. Comparative analysis of processed ribosomal protein pseudogenes in four mammalian genomes. (PMID: 19123937) Balasubramanian S … Gerstein M (Genome biology 2009) 2 3 58
  3. N-terminome analysis of the human mitochondrial proteome. (PMID: 25944712) Vaca Jacome AS … Carapito C (Proteomics 2015) 4 58
  4. An enzyme assisted RP-RPLC approach for in-depth analysis of human liver phosphoproteome. (PMID: 24275569) Bian Y … Zou H (Journal of proteomics 2014) 4 58
  5. A new system for naming ribosomal proteins. (PMID: 24524803) Ban N … Yusupov M (Current opinion in structural biology 2014) 4 58

Products for RPL9P7 Gene

Sources for RPL9P7 Gene

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