Aliases for RPL9P23 Gene

Aliases for RPL9P23 Gene

  • Ribosomal Protein L9 Pseudogene 23 2 3
  • RPL9_5_1139 3

External Ids for RPL9P23 Gene

Summaries for RPL9P23 Gene

GeneCards Summary for RPL9P23 Gene

RPL9P23 (Ribosomal Protein L9 Pseudogene 23) is a Pseudogene.

Additional gene information for RPL9P23 Gene

No data available for Entrez Gene Summary , CIViC Summary , UniProtKB/Swiss-Prot Summary , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , Rfam classification and piRNA Summary for RPL9P23 Gene

Genomics for RPL9P23 Gene

GeneHancer (GH) Regulatory Elements Pubs

Promoters and enhancers for RPL9P23 Gene
GeneHancer (GH) Identifier GH Type GH
Score
GH Sources Gene Association Score Total Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor
Binding Sites
Gene Targets
GH11J041534 Enhancer 0.5 Ensembl ENCODE 600.7 -0.8 -776 2.5 POLR2A POU5F1 RPL9P23 LRRC4C piR-32214-095 LINC02741
GH11J041521 Enhancer 0.4 Ensembl ENCODE 0.4 -13.3 -13260 2.3 BACH1 LRRC4C RPL9P23 piR-32214-095 LINC02741
GH11J041497 Enhancer 0.6 Ensembl ENCODE 0.3 -38.2 -38224 1.8 CTCF TEAD4 RAD21 SP1 LRRC4C piR-32214-095 RPL9P23 LINC02741
GH11J041499 Enhancer 0.3 Ensembl 0.3 -36.6 -36624 1 CTCF RAD21 piR-32214-095 LRRC4C RPL9P23 LINC02741
GH11J041505 Enhancer 0.3 Ensembl 0.3 -30.0 -30024 0.6 POLR2A LRRC4C RPL9P23 piR-32214-095 LINC02741
- Elite GeneHancer and/or Elite GeneHancer-gene association Download GeneHancer data from 2017 publication | Request up-to-date GeneHancer data (full dataset)

GeneHancers around RPL9P23 on the GeneHancer Hub at the UCSC Golden Path

Genomic Locations for RPL9P23 Gene

Genomic Locations for RPL9P23 Gene
chr11:41,536,125-41,538,986
(GRCh38/hg38)
Size:
2,862 bases
Orientation:
Plus strand
chr11:41,557,675-41,560,536
(GRCh37/hg19)
Size:
2,862 bases
Orientation:
Plus strand

Genomic View for RPL9P23 Gene

Genes around RPL9P23 on UCSC Golden Path with GeneCards custom track

Cytogenetic band:
RPL9P23 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for RPL9P23 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

RefSeq DNA sequence for RPL9P23 Gene

Proteins for RPL9P23 Gene

Post-translational modifications for RPL9P23 Gene

No Post-translational modifications

No data available for DME Specific Peptides for RPL9P23 Gene

Domains & Families for RPL9P23 Gene

No data available for Gene Families , Protein Domains , Suggested Antigen Peptide Sequences , Graphical View of Domain Structure and UniProtKB/Swiss-Prot for RPL9P23 Gene

Function for RPL9P23 Gene

Phenotypes From GWAS Catalog for RPL9P23 Gene

Animal Model Products

CRISPR Products

No data available for Molecular function , Enzyme Numbers (IUBMB) , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for RPL9P23 Gene

Localization for RPL9P23 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS , Subcellular locations from the Human Protein Atlas (HPA) and Gene Ontology (GO) - Cellular Components for RPL9P23 Gene

Pathways & Interactions for RPL9P23 Gene

PathCards logo

SuperPathways for RPL9P23 Gene

No Data Available

Gene Ontology (GO) - Biological Process for RPL9P23 Gene

None

No data available for Pathways by source , Interacting Proteins and SIGNOR curated interactions for RPL9P23 Gene

Drugs & Compounds for RPL9P23 Gene

No Compound Related Data Available

Transcripts for RPL9P23 Gene

Alternative Splicing Database (ASD) splice patterns (SP) for RPL9P23 Gene

No ASD Table

Relevant External Links for RPL9P23 Gene

GeneLoc Exon Structure for
RPL9P23

No data available for mRNA/cDNA for RPL9P23 Gene

Expression for RPL9P23 Gene

mRNA expression in normal human tissues from GTEx, Illumina, BioGPS, and SAGE for RPL9P23 Gene

genes like me logo Genes that share expression patterns with RPL9P23: view

No data available for mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , mRNA differential expression in normal tissues , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners , mRNA Expression by UniProt/SwissProt , Evidence on tissue expression from TISSUES and Phenotype-based relationships between genes and organs from Gene ORGANizer for RPL9P23 Gene

Orthologs for RPL9P23 Gene

No data available for Orthologs and Evolution for RPL9P23 Gene

Paralogs for RPL9P23 Gene

No data available for Paralogs for RPL9P23 Gene

Variants for RPL9P23 Gene

Additional Variant Information for RPL9P23 Gene

SNPedia medical, phenotypic, and genealogical associations of SNPs for
RPL9P23

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Sequence variations, with clinical significance, from ClinVar and Humsavar, with links to dbSNP , Additional dbSNP identifiers (rs#s) , Structural Variations from Database of Genomic Variants (DGV) and Variation tolerance for RPL9P23 Gene

Disorders for RPL9P23 Gene

Additional Disease Information for RPL9P23

Genetic Association Database
(GAD)

No disorders were found for RPL9P23 Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot and Genatlas for RPL9P23 Gene

Publications for RPL9P23 Gene

  1. Comparative analysis of processed ribosomal protein pseudogenes in four mammalian genomes. (PMID: 19123937) Balasubramanian S … Gerstein M (Genome biology 2009) 2 3
  2. A genome-wide study of common SNPs and CNVs in cognitive performance in the CANTAB. (PMID: 19734545) Need AC … Goldstein DB (Human molecular genetics 2009) 41
  3. A genome-wide association scan of RR and QT interval duration in 3 European genetically isolated populations: the EUROSPAN project. (PMID: 20031603) Marroni F … EUROSPAN Consortium (Circulation. Cardiovascular genetics 2009) 41
  4. Genome-wide association to body mass index and waist circumference: the Framingham Heart Study 100K project. (PMID: 17903300) Fox CS … Atwood LD (BMC medical genetics 2007) 41
  5. Genetic correlates of brain aging on MRI and cognitive test measures: a genome-wide association and linkage analysis in the Framingham Study. (PMID: 17903297) Seshadri S … Wolf PA (BMC medical genetics 2007) 41

Products for RPL9P23 Gene

Sources for RPL9P23 Gene