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Aliases for RPL9P21 Gene
External Ids for RPL9P21 Gene
- HGNC: 35886
- NCBI Entrez Gene: 728374
- Ensembl: ENSG00000214089
Previous GeneCards Identifiers for RPL9P21 Gene
- GC10M044231
- GC10M044909
Summaries for RPL9P21 Gene
GeneCards Summary for RPL9P21 Gene
RPL9P21 (Ribosomal Protein L9 Pseudogene 21) is a Pseudogene.
Additional gene information for RPL9P21 Gene
No data available for Entrez Gene Summary , CIViC Summary , UniProtKB/Swiss-Prot Summary , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , Rfam classification and piRNA Summary for RPL9P21 Gene
Genomics for RPL9P21 Gene
GeneHancer (GH) Regulatory Elements Pubs
Promoters and enhancers for RPL9P21 Gene
| GeneHancer (GH) Identifier | GH Type | GH Score |
GH Sources | Gene Association Score | Total Score | TSS distance (kb) | Number of Genes Away | Size (kb) | Transcription Factor Binding Sites |
Gene Targets |
|---|---|---|---|---|---|---|---|---|---|---|
| GH10J044415 | Enhancer | 0.5 | Ensembl ENCODE | 250.7 | -1.5 | -1546 | 1.6 | SPI1 CEBPB | lnc-CXCL12-5 RPL9P21 CXCL12 lnc-C10orf142-3 HSALNG0077618 TMEM72 | |
| GH10J044438 | Enhancer | 0.5 | ENCODE | 0.3 | -23.6 | -23609 | 0.2 | ZNF316 MAFG MAFK CREB1 EMSY | CXCL12 HSALNG0077618 RPL9P21 lnc-C10orf142-3 TMEM72 | |
| GH10J044458 | Enhancer | 0.6 | Ensembl ENCODE | 0.3 | -44.4 | -44422 | 2.4 | ATF2 CEBPB BCL6B CEBPG | CXCL12 HSALNG0077618 RPL9P21 lnc-C10orf142-3 TMEM72 | |
| GH10J044422 | Enhancer | 0.3 | ENCODE | 0.4 | -7.7 | -7739 | 0.1 | ZNF547 | RPL9P21 lnc-C10orf142-3 HSALNG0077618 CXCL12 TMEM72 | |
| GH10J044419 | Enhancer | 0.2 | Ensembl | 0.4 | -5.1 | -5122 | 0.2 | TMEM72-AS1 RPL9P21 lnc-C10orf142-3 CXCL12 HSALNG0077618 TMEM72 |
- Elite GeneHancer and/or Elite GeneHancer-gene association
Download GeneHancer data from 2017 publication |
Request up-to-date GeneHancer data (full dataset)
GeneHancers around RPL9P21 on the GeneHancer Hub at the UCSC Golden Path
Genomic Locations for RPL9P21 Gene
Latest Assembly
- chr10:44,414,415-44,415,179
- (GRCh38/hg38)
- Size:
- 765 bases
- Orientation:
- Minus strand
Previous Assembly
- chr10:44,909,863-44,910,627
- (GRCh37/hg19 by Entrez Gene)
- Size:
- 765 bases
- Orientation:
- Minus strand
- chr10:44,910,097-44,910,601
- (GRCh37/hg19 by Ensembl)
- Size:
- 505 bases
- Orientation:
- Minus strand
Genomic View for RPL9P21 Gene
Genes around RPL9P21 on UCSC Golden Path with GeneCards custom track
- Cytogenetic band:
-
- 10q11.21 by HGNC
- 10q11.21 by Entrez Gene
- 10q11.21 by Ensembl
RPL9P21 Gene in genomic location: bands according to
Ensembl, locations according to GeneLoc
(and/or Entrez Gene and/or Ensembl if different)
Genomic Neighborhood
• Exon Structure
• Gene Density
RefSeq DNA sequence for RPL9P21 Gene
Proteins for RPL9P21 Gene
Post-translational modifications for RPL9P21 Gene
No Post-translational modifications
Antibodies for research
Protein products for research
- Search Origene for Purified Proteins, MassSpec and Protein Over-expression Lysates for RPL9P21
- Origene Custom Protein Services for RPL9P21
Assay products for research
No data available for DME Specific Peptides for RPL9P21 Gene
Domains & Families for RPL9P21 Gene
No data available for Gene Families , Protein Domains , Suggested Antigen Peptide Sequences , Graphical View of Domain Structure and UniProtKB/Swiss-Prot for RPL9P21 Gene
Function for RPL9P21 Gene
Phenotypes From GWAS Catalog for RPL9P21 Gene
Animal Models for research
- Taconic Biosciences: Generate A Custom CRISPR Mouse Model For Your Study
CRISPR products for research
- Applied Biological Materials (abm): CRISPR Clones for RPL9P21 - Starting at $85 >
- * RPL9P21 CRISPR as ready-to-use vector or virus: Non-viral | Lenti- | Adeno- | AAV- | siRNA - Browse All
- * Cas9 Nucleases, Nickases, Null Mutants, and GFP tag also available.
- Browse CRISPR knockouts for RPL9P21
miRNA products for research
Inhibitory RNAs for research
Clone products for research
No data available for Molecular function , Enzyme Numbers (IUBMB) , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for RPL9P21 Gene
Localization for RPL9P21 Gene
No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS , Subcellular locations from the Human Protein Atlas (HPA) and Gene Ontology (GO) - Cellular Components for RPL9P21 Gene
Transcripts for RPL9P21 Gene
mRNA/cDNA for RPL9P21 Gene
- 1 Ensembl transcripts including schematic representations, and UCSC links to gene/alias where relevant :
-
- ENST00000392269 505 nts (view in UCSC)
CRISPR products for research
- Applied Biological Materials (abm): CRISPR Clones for RPL9P21 - Starting at $85 >
- * RPL9P21 CRISPR as ready-to-use vector or virus: Non-viral | Lenti- | Adeno- | AAV- | siRNA - Browse All
- * Cas9 Nucleases, Nickases, Null Mutants, and GFP tag also available.
- Browse CRISPR knockouts for RPL9P21
miRNA products for research
Inhibitory RNAs for research
Clone products for research
Relevant External Links for RPL9P21 Gene
- GeneLoc Exon Structure for
- RPL9P21
Expression for RPL9P21 Gene
Primer products for research
No data available for mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , mRNA differential expression in normal tissues , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners , mRNA Expression by UniProt/SwissProt , Evidence on tissue expression from TISSUES and Phenotype-based relationships between genes and organs from Gene ORGANizer for RPL9P21 Gene
Orthologs for RPL9P21 Gene
No data available for Orthologs for RPL9P21 Gene
Paralogs for RPL9P21 Gene
No data available for Paralogs for RPL9P21 Gene
Variants for RPL9P21 Gene
Additional Variant Information for RPL9P21 Gene
- SNPedia medical, phenotypic, and genealogical associations of SNPs for
- RPL9P21
No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Sequence variations, with clinical significance, from ClinVar and Humsavar, with links to dbSNP , dbSNP identifiers (rs#s) for variants without ClinVar clinical significance , Structural Variations from Database of Genomic Variants (DGV) and Variation tolerance for RPL9P21 Gene
Disorders for RPL9P21 Gene
Additional Disease Information for RPL9P21
- Genetic Association Database
- (GAD)
No disorders were found for RPL9P21 Gene.
No data available for MalaCards , UniProtKB/Swiss-Prot and Genatlas for RPL9P21 Gene
Publications for RPL9P21 Gene
- Comparative analysis of processed ribosomal protein pseudogenes in four mammalian genomes. (PMID: 19123937) Balasubramanian S … Gerstein M (Genome biology 2009) 2 3
- Genome-wide association study identifies BICD1 as a susceptibility gene for emphysema. (PMID: 20709820) Kong X … ECLIPSE Study NETT Investigators (American journal of respiratory and critical care medicine 2011) 41
- A genome-wide meta-analysis identifies novel loci associated with schizophrenia and bipolar disorder. (PMID: 20889312) Wang KS … Aragam N (Schizophrenia research 2010) 41
- Genome-wide association with bone mass and geometry in the Framingham Heart Study. (PMID: 17903296) Kiel DP … Karasik D (BMC medical genetics 2007) 41
- Genome-wide association study for subclinical atherosclerosis in major arterial territories in the NHLBI's Framingham Heart Study. (PMID: 17903303) O'Donnell CJ … Demissie S (BMC medical genetics 2007) 41
No data available for Mastermind for RPL9P21 Gene
Products for RPL9P21 Gene
- Browse OriGene Antibodies
- Custom Antibody Services
- Browse OriGene ELISA Kits
- Custom Assay Services
- Search Origene for Purified Proteins, MassSpec and Protein Over-expression Lysates for RPL9P21
- Origene Custom Protein Services for RPL9P21
- Browse OriGene Inhibitory RNA Products For RPL9P21
- Browse OriGene qPCR primer pairs and template standards
- Browse CRISPR knockouts for RPL9P21
- Custom cloning services - gene synthesis, subcloning, mutagenesis, variant library, vector shuttling
- Browse OriGene miRNA Products For RPL9P21
- Browse Sino Biological cDNA Clones
- Browse Sino Biological Recombinant Proteins
- Browse Sino Biological Cell Lysates
- Browse Sino Biological Antibodies
- Browse Sino Biological Assays
- Browse ELISA Kits
- Browse CRO Services
- High-throughput Antibody Production Service
- Protein Production Service
- Epitope Tag Antibodies & Reporter Protein Antibodies
- Lentiviral ORF Clones
- Browse GeneCopoeia Cell Lines
- Search GeneCopoeia for knockout CRISPR/Cas9 clones, lentivirus, and/or AAV products for RPL9P21
- Search GeneCopoeia for ORF cDNA, lentivirus, AAV viral particles, and/or promoter clone products for RPL9P21
- Search GeneCopoeia for miRNA 3'UTR Target clone products for RPL9P21
- Search GeneCopoeia for shRNA, lentivirus, and/or AAV clone products for RPL9P21
Sources for RPL9P21 Gene
- (1) GeneCards
- (2) HGNC
- (3) NCBI Entrez Gene
- (4) UniProtKB/Swiss-Prot
- (5) Ensembl
- (6) OMIM® (Updated: 05-Mar-2021)
- (7) GeneLoc
- (8) Gene Wiki
- (9) UCSC
- (10) PhosphoSitePlus
- (11) Cell Signaling Technology
- (12) GO
- (13) UniProtKB/TrEMBL
- (14) InterPro
- (15) ProtoNet
- (16) Blocks
- (17) MGI
- (18) IUBMB
- (19) KEGG
- (20) MINT
- (21) STRING
- (22) IntAct
- (23) Novoseek
- (24) PharmGKB
- (25) DrugBank
- (26) HMDB
- (27) ASD
- (28) SAGE
- (29) SOURCE
- (30) HomoloGene
- (31) PanEnsembl
- (32) euGenes
- (33) SGD
- (34) FlyBase
- (35) WormBase
- (36) Pseudogene
- (37) DGV
- (38) dbSNP
- (39) GenAtlas
- (40) HGMD
- (41) GAD
- (42) BGMUT
- (43) HuGE
- (44) Atlas
- (45) GenBank
- (46) HORDE
- (47) HUGE
- (48) IMGT
- (49) Leiden
- (50) miRBase
- (51) DME
- (52) OriGene
- (53) PubMed
- (54) R&D Systems
- (55) TGDB
- (56) Tocris
- (57) Abcam
- (58) Novus Biologicals
- (59) ProSpec
- (60) Sino Biological
- (61) GenScript
- (62) Qiagen
- (63) OCA
- (64) Proteopedia
- (65) MOPED
- (66) neXtProt
- (67) Reactome
- (68) GeneGo (Thomson Reuters)
- (69) DISEASES
- (70) SIMAP
- (71) GenomeRNAi
- (72) LifeMap
- (73) miRTarBase
- (74) MalaCards
- (75) Invitrogen
- (76) BitterDB
- (77) ESI-BIO
- (78) RefSeq
- (79) BioSystems
- (80) MaxQB
- (81) IUPHAR
- (82) BioGPS
- (83) Illumina
- (84) COMPARTMENTS
- (85) HOMER
- (86) PaxDb
- (87) ApexBio
- (88) Addgene
- (89) antibodies-online
- (90) CYP
- (91) NONCODE
- (92) TreeFam
- (93) PathCards
- (94) GeneReviews
- (95) GeneTex
- (96) Taconic Biosciences
- (97) GTEx
- (98) ProteomicsDB
- (99) SCBT
- (100) DGIdb
- (101) ClinicalTrials
- (102) RVIS
- (103) SIGNOR
- (104) diseasecard
- (105) NIH Rare Diseases
- (106) Orphanet
- (107) UMLS
- (108) GTR
- (109) Disease Ontology
- (110) MedlinePlus Genetics
- (111) MeSH
- (112) MedlinePlus
- (113) CDC
- (114) NINDS
- (115) NCBI Bookshelf
- (116) ClinVar
- (117) Gene Damage Index
- (118) HPO
- (119) UDN
- (120) VISTA
- (121) FANTOM5
- (122) ENCODE
- (123) ProSci
- (124) Horizon
- (125) The Signaling Pathways Project (SPP)
- (126) IID
- (127) VectorBuilder
- (128) SNPedia
- (129) BRCA Exchange
- (130) CIViC
- (131) ProteoGenix
- (132) dbSUPER
- (133) TISSUES
- (134) Gene ORGANizer
- (135) abm
- (136) Human Protein Atlas
- (137) GWAS Catalog
- (138) Monarch Initiative
- (139) DataMed
- (140) HumanCyc
- (141) UCNEbase
- (142) EPDnew
- (143) Applied Biosystems
- (144) GlyConnect
- (145) Aminode
- (146) GeneCopoeia
- (147) GPS-Prot
- (148) RNAcentral
- (149) LncRNADisease
- (150) LOVD
- (151) miR2Disease
- (152) DiseaseEnhancer
- (153) Boster Bio
- (154) Biorbyt
- (155) Biocompare
- (156) Mastermind
- (157) CTD^2 Dashboard
- (158) CraniofacialAtlas
- (159) GeneImprint
- (160) Synthego
- (161) ENA
- (162) GtRNAdb
- (163) LncBase
- (164) LncBook
- (165) LNCipedia
- (166) Modomics
- (167) PDBe
- (168) Rfam
- (169) SILVA
- (170) snOPY
- (171) SRPDB
- (172) GENCODE
- (173) TarBase
- (174) Open Targets Platform
- (175) 5SRRNADB
- (176) snoDB
- (177) MirGeneDB