Aliases for RPL9P16 Gene

Aliases for RPL9P16 Gene

  • Ribosomal Protein L9 Pseudogene 16 2 3 5
  • RPL9_3_534 3

External Ids for RPL9P16 Gene

Previous GeneCards Identifiers for RPL9P16 Gene

  • GC04P169914
  • GC04P169677
  • GC04P165429

Summaries for RPL9P16 Gene

GeneCards Summary for RPL9P16 Gene

RPL9P16 (Ribosomal Protein L9 Pseudogene 16) is a Pseudogene.

Additional gene information for RPL9P16 Gene

No data available for Entrez Gene Summary , CIViC Summary , UniProtKB/Swiss-Prot Summary , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , Rfam classification and piRNA Summary for RPL9P16 Gene

Genomics for RPL9P16 Gene

GeneHancer (GH) Regulatory Elements for RPL9P16 Gene

Promoters and enhancers for RPL9P16 Gene
GeneHancer (GH) Identifier GH Type GH
Score
GH Sources Gene Association Score Total Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor
Binding Sites
Gene Targets
GH04J168755 Enhancer 0.9 Ensembl ENCODE dbSUPER 0.7 +2.6 2591 6.2 FOS ARNT SPI1 NFE2 JUND BHLHE40 CEBPB SCRT2 MYC STAT3 RPL9P16 lnc-ANXA10-4 PALLD
GH04J168751 Enhancer 0.7 Ensembl ENCODE dbSUPER 0.7 -3.8 -3848 1.3 FOS STAT3 RPL9P16 RF00026-837 RNU6-1336P PALLD
GH04J168739 Enhancer 1.1 FANTOM5 Ensembl ENCODE dbSUPER 0.4 -14.8 -14797 3.6 KLF4 SPI1 IKZF1 GATA3 IKZF2 PKNOX1 DPF2 RNU6-1336P DDX60L PALLD DDX60 RPL9P16 RF00026-837
GH04J168734 Enhancer 1.1 Ensembl ENCODE CraniofacialAtlas dbSUPER 0.4 -18.9 -18903 4.2 USF1 TEAD4 IKZF1 ZNF217 CUX1 BHLHE40 ZNF687 RAD51 IKZF2 DPF2 PALLD RNU6-1336P ENSG00000249609 ENSG00000249623 RPL9P16 RF00026-837
GH04J168764 Enhancer 0.9 Ensembl ENCODE dbSUPER 0.4 +10.7 10664 3.3 JUND FOS EP300 NR2F2 FOSL2 CEBPB JUN RCOR1 RFX5 STAT3 PALLD lnc-ANXA10-4 RPL9P16
- Elite GeneHancer and/or Elite GeneHancer-gene association Download GeneHancer data from 2017 publication | Request up-to-date GeneHancer data (full dataset)

GeneHancers around RPL9P16 on UCSC Golden Path with GeneCards custom track

Genomic Locations for RPL9P16 Gene

Genomic Locations for RPL9P16 Gene
chr4:168,755,798-168,756,481
(GRCh38/hg38)
Size:
684 bases
Orientation:
Plus strand
chr4:169,676,949-169,677,632
(GRCh37/hg19)
Size:
684 bases
Orientation:
Plus strand

Genomic View for RPL9P16 Gene

Genes around RPL9P16 on UCSC Golden Path with GeneCards custom track

Cytogenetic band:
RPL9P16 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for RPL9P16 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

RefSeq DNA sequence for RPL9P16 Gene

Proteins for RPL9P16 Gene

Post-translational modifications for RPL9P16 Gene

No Post-translational modifications

No data available for DME Specific Peptides for RPL9P16 Gene

Domains & Families for RPL9P16 Gene

No data available for Gene Families , Protein Domains , Suggested Antigen Peptide Sequences , Graphical View of Domain Structure and UniProtKB/Swiss-Prot for RPL9P16 Gene

Function for RPL9P16 Gene

Phenotypes From GWAS Catalog for RPL9P16 Gene

Animal Model Products

CRISPR Products

No data available for Molecular function , Enzyme Numbers (IUBMB) , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for RPL9P16 Gene

Localization for RPL9P16 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS , Subcellular locations from the Human Protein Atlas (HPA) and Gene Ontology (GO) - Cellular Components for RPL9P16 Gene

Pathways & Interactions for RPL9P16 Gene

PathCards logo

SuperPathways for RPL9P16 Gene

No Data Available
;

Gene Ontology (GO) - Biological Process for RPL9P16 Gene

None

No data available for Pathways by source , Interacting Proteins and SIGNOR curated interactions for RPL9P16 Gene

Drugs & Compounds for RPL9P16 Gene

No Compound Related Data Available

Transcripts for RPL9P16 Gene

mRNA/cDNA for RPL9P16 Gene

1 Ensembl transcripts including schematic representations, and UCSC links to gene/alias where relevant :

CRISPR Products

Alternative Splicing Database (ASD) splice patterns (SP) for RPL9P16 Gene

No ASD Table

Relevant External Links for RPL9P16 Gene

GeneLoc Exon Structure for
RPL9P16

Expression for RPL9P16 Gene

mRNA expression in normal human tissues from GTEx, Illumina, BioGPS, and SAGE for RPL9P16 Gene

genes like me logo Genes that share expression patterns with RPL9P16: view

No data available for mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , mRNA differential expression in normal tissues , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners , mRNA Expression by UniProt/SwissProt , Evidence on tissue expression from TISSUES and Phenotype-based relationships between genes and organs from Gene ORGANizer for RPL9P16 Gene

Orthologs for RPL9P16 Gene

Evolution for RPL9P16 Gene

ENSEMBL:
Gene Tree for RPL9P16 (if available)
TreeFam:
Gene Tree for RPL9P16 (if available)

No data available for Orthologs for RPL9P16 Gene

Paralogs for RPL9P16 Gene

No data available for Paralogs for RPL9P16 Gene

Variants for RPL9P16 Gene

Additional Variant Information for RPL9P16 Gene

SNPedia medical, phenotypic, and genealogical associations of SNPs for
RPL9P16

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Sequence variations, with clinical significance, from ClinVar and Humsavar, with links to dbSNP , Additional dbSNP identifiers (rs#s) , Structural Variations from Database of Genomic Variants (DGV) and Variation tolerance for RPL9P16 Gene

Disorders for RPL9P16 Gene

Additional Disease Information for RPL9P16

Genetic Association Database
(GAD)

No disorders were found for RPL9P16 Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot and Genatlas for RPL9P16 Gene

Publications for RPL9P16 Gene

  1. Comparative analysis of processed ribosomal protein pseudogenes in four mammalian genomes. (PMID: 19123937) Balasubramanian S … Gerstein M (Genome biology 2009) 2 3 54

Products for RPL9P16 Gene

Sources for RPL9P16 Gene