Aliases for RPL7P49 Gene

Aliases for RPL7P49 Gene

  • Ribosomal Protein L7 Pseudogene 49 2 3 5
  • RPL7_20_1575 3
  • RPL7P49 5

External Ids for RPL7P49 Gene

Previous GeneCards Identifiers for RPL7P49 Gene

  • GC17U901153
  • GC17M074427

Summaries for RPL7P49 Gene

GeneCards Summary for RPL7P49 Gene

RPL7P49 (Ribosomal Protein L7 Pseudogene 49) is a Pseudogene.

Additional gene information for RPL7P49 Gene

No data available for Entrez Gene Summary , CIViC Summary , UniProtKB/Swiss-Prot Summary , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , Rfam classification and piRNA Summary for RPL7P49 Gene

Genomics for RPL7P49 Gene

GeneHancer (GH) Regulatory Elements Pubs

Promoters and enhancers for RPL7P49 Gene
GeneHancer (GH) Identifier GH Type GH
Score
GH Sources Gene Association Score Total Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor
Binding Sites
Gene Targets
GH17J076432 Enhancer 0.8 Ensembl ENCODE 250.7 -0.7 -657 2.4 CTCF SIN3A CTBP1 RFX5 TEAD3 PKNOX1 ATF4 MEIS2 CREB1 TGIF2 RPL7P49 FBF1 UBE2O PRPSAP1
GH17J076452 Promoter/Enhancer 2 EPDnew Ensembl ENCODE CraniofacialAtlas 0.3 -21.5 -21547 2.6 CHD2 TBP SP1 MXD4 SMAD5 MBD2 ZNF217 CTCF NONO THAP11 AANAT UBE2O UNK SRSF2 ENSG00000267342 ENSG00000267546 ENSG00000266980 CDK3 SEPTIN9 TRIM65
GH17J076427 Enhancer 0.8 Ensembl ENCODE 0.7 +3.1 3143 4.4 RBM22 ZNF316 BHLHE40 IKZF1 MAFK SPI1 IKZF2 ZBTB26 EED RELB SPHK1 UBE2O AANAT PRPSAP1 RNU6-24P QRICH2 RPL7P49 HSALNG0118832
GH17J076443 Enhancer 1.2 FANTOM5 ENCODE 0.4 -15.1 -15117 5.3 TBP ZBTB10 MXD4 CEBPA DEK IKZF1 IRF2 ZFP64 BHLHE40 CEBPB SRSF2 UNK ENSG00000266980 METTL23 MFSD11 SEPTIN9 ENSG00000267342 CDK3 SAP30BP SPHK1
GH17J076419 Enhancer 1 FANTOM5 Ensembl ENCODE dbSUPER 0.4 +10.5 10543 2.4 ZNF274 ZBTB33 EGR1 HDGF BACH1 TRIM28 SPHK1 ENSG00000266980 SRSF2 UNK ENSG00000267546 AANAT UBE2O PRPSAP1 RNU6-24P METTL23
- Elite GeneHancer and/or Elite GeneHancer-gene association Download GeneHancer data from 2017 publication | Request up-to-date GeneHancer data (full dataset)

GeneHancers around RPL7P49 on the GeneHancer Hub at the UCSC Golden Path

Genomic Locations for RPL7P49 Gene

Latest Assembly
chr17:76,430,351-76,431,144
(GRCh38/hg38)
Size:
794 bases
Orientation:
Minus strand

Previous Assembly
chr17:74,426,433-74,427,226
(GRCh37/hg19 by Entrez Gene)
Size:
794 bases
Orientation:
Minus strand

chr17:74,426,499-74,427,206
(GRCh37/hg19 by Ensembl)
Size:
708 bases
Orientation:
Minus strand

Genomic View for RPL7P49 Gene

Genes around RPL7P49 on UCSC Golden Path with GeneCards custom track

Cytogenetic band:
RPL7P49 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for RPL7P49 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

RefSeq DNA sequence for RPL7P49 Gene

Proteins for RPL7P49 Gene

Post-translational modifications for RPL7P49 Gene

No Post-translational modifications

No data available for DME Specific Peptides for RPL7P49 Gene

Domains & Families for RPL7P49 Gene

No data available for Gene Families , Protein Domains , Suggested Antigen Peptide Sequences , Graphical View of Domain Structure and UniProtKB/Swiss-Prot for RPL7P49 Gene

Function for RPL7P49 Gene

Phenotypes From GWAS Catalog for RPL7P49 Gene

No data available for Molecular function , Enzyme Numbers (IUBMB) , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for RPL7P49 Gene

Localization for RPL7P49 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS , Subcellular locations from the Human Protein Atlas (HPA) and Gene Ontology (GO) - Cellular Components for RPL7P49 Gene

Pathways & Interactions for RPL7P49 Gene

PathCards logo

SuperPathways for RPL7P49 Gene

No Data Available

Gene Ontology (GO) - Biological Process for RPL7P49 Gene

None

No data available for Pathways by source , Interacting Proteins and SIGNOR curated interactions for RPL7P49 Gene

Drugs & Compounds for RPL7P49 Gene

No Compound Related Data Available

Transcripts for RPL7P49 Gene

mRNA/cDNA for RPL7P49 Gene

1 Ensembl transcripts including schematic representations, and UCSC links to gene/alias where relevant :

Alternative Splicing Database (ASD) splice patterns (SP) for RPL7P49 Gene

No ASD Table

Relevant External Links for RPL7P49 Gene

GeneLoc Exon Structure for
RPL7P49

Expression for RPL7P49 Gene

mRNA expression in normal human tissues from GTEx, Illumina, BioGPS, and SAGE for RPL7P49 Gene

genes like me logo Genes that share expression patterns with RPL7P49: view

No data available for mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , mRNA differential expression in normal tissues , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners , mRNA Expression by UniProt/SwissProt , Evidence on tissue expression from TISSUES and Phenotype-based relationships between genes and organs from Gene ORGANizer for RPL7P49 Gene

Orthologs for RPL7P49 Gene

Evolution for RPL7P49 Gene

ENSEMBL:
Gene Tree for RPL7P49 (if available)
TreeFam:
Gene Tree for RPL7P49 (if available)

No data available for Orthologs for RPL7P49 Gene

Paralogs for RPL7P49 Gene

No data available for Paralogs for RPL7P49 Gene

Variants for RPL7P49 Gene

Additional Variant Information for RPL7P49 Gene

SNPedia medical, phenotypic, and genealogical associations of SNPs for
RPL7P49

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Sequence variations, with clinical significance, from ClinVar and Humsavar, with links to dbSNP , dbSNP identifiers (rs#s) for variants without ClinVar clinical significance , Structural Variations from Database of Genomic Variants (DGV) and Variation tolerance for RPL7P49 Gene

Disorders for RPL7P49 Gene

No disorders were found for RPL7P49 Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot , Genatlas and External Links for RPL7P49 Gene

Publications for RPL7P49 Gene

  1. Comparative analysis of processed ribosomal protein pseudogenes in four mammalian genomes. (PMID: 19123937) Balasubramanian S … Gerstein M (Genome biology 2009) 2 3

No data available for Mastermind for RPL7P49 Gene

Products for RPL7P49 Gene

Sources for RPL7P49 Gene