Aliases for RPL7P38 Gene

Aliases for RPL7P38 Gene

  • Ribosomal Protein L7 Pseudogene 38 2 3 5
  • RPL7_24_1261 3

External Ids for RPL7P38 Gene

Previous GeneCards Identifiers for RPL7P38 Gene

  • GC12P078946
  • GC12P080423

Summaries for RPL7P38 Gene

GeneCards Summary for RPL7P38 Gene

RPL7P38 (Ribosomal Protein L7 Pseudogene 38) is a Pseudogene.

Additional gene information for RPL7P38 Gene

No data available for Entrez Gene Summary , CIViC Summary , UniProtKB/Swiss-Prot Summary , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , Rfam classification and piRNA Summary for RPL7P38 Gene

Genomics for RPL7P38 Gene

GeneHancer (GH) Regulatory Elements for RPL7P38 Gene

Promoters and enhancers for RPL7P38 Gene
GeneHancer (GH) Identifier GH Type GH
Score
GH Sources Gene Association Score Total Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor
Binding Sites
Gene Targets
GH12J080030 Enhancer 0.2 Ensembl 500.7 +1.3 1324 0.4 RPL7P38 RF00066-049 RNU7-106P
GH12J079931 Promoter/Enhancer 2.1 EPDnew Ensembl ENCODE CraniofacialAtlas 8.5 -94.7 -94653 6 ZBTB40 ZNF217 EP300 SIN3A NRF1 POLR2G GTF2E2 PHF8 ZFX ZNF639 PPP1R12A PPP1R12A-AS1 lnc-OTOGL-1 PAWR NOP56P3 RPL7P38 RF00994-252
GH12J079844 Enhancer 0.9 Ensembl ENCODE 7.4 -181.1 -181113 7.3 ZSCAN5C JUND FOS NCOR1 ZNF316 TRIM24 FOSL2 SPI1 NR2F2 FOSL1 PPP1R12A RPL7P38 ENSG00000258044 piR-38736-005
GH12J079926 Enhancer 0.7 ENCODE 8.5 -100.9 -100872 2.4 ZSCAN5C TRIM22 ZNF316 SRF ZNF592 PBX2 NBN SPI1 NFE2 SMARCA5 RPL7P38 PPP1R12A PPP1R12A-AS1 RF00994-252
GH12J079782 Enhancer 0.6 Ensembl ENCODE 7.5 -246.2 -246176 1.8 PRDM1 ATF4 GATA1 CBFA2T3 lnc-PAWR-9 PAWR RPL7P38 lnc-PAWR-10 PPP1R12A
- Elite GeneHancer and/or Elite GeneHancer-gene association Download GeneHancer data from 2017 publication | Request up-to-date GeneHancer data (full dataset)

GeneHancers around RPL7P38 on UCSC Golden Path with GeneCards custom track

Genomic Locations for RPL7P38 Gene

Genomic Locations for RPL7P38 Gene
chr12:80,028,877-80,029,700
(GRCh38/hg38)
Size:
824 bases
Orientation:
Plus strand
chr12:80,422,657-80,423,480
(GRCh37/hg19)
Size:
824 bases
Orientation:
Plus strand

Genomic View for RPL7P38 Gene

Genes around RPL7P38 on UCSC Golden Path with GeneCards custom track

Cytogenetic band:
RPL7P38 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for RPL7P38 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

RefSeq DNA sequence for RPL7P38 Gene

Proteins for RPL7P38 Gene

Post-translational modifications for RPL7P38 Gene

No Post-translational modifications

No data available for DME Specific Peptides for RPL7P38 Gene

Domains & Families for RPL7P38 Gene

No data available for Gene Families , Protein Domains , Suggested Antigen Peptide Sequences , Graphical View of Domain Structure and UniProtKB/Swiss-Prot for RPL7P38 Gene

Function for RPL7P38 Gene

Animal Model Products

CRISPR Products

No data available for Molecular function , Enzyme Numbers (IUBMB) , Phenotypes From GWAS Catalog , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for RPL7P38 Gene

Localization for RPL7P38 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS , Subcellular locations from the Human Protein Atlas (HPA) and Gene Ontology (GO) - Cellular Components for RPL7P38 Gene

Pathways & Interactions for RPL7P38 Gene

PathCards logo

SuperPathways for RPL7P38 Gene

No Data Available
;

Gene Ontology (GO) - Biological Process for RPL7P38 Gene

None

No data available for Pathways by source , Interacting Proteins and SIGNOR curated interactions for RPL7P38 Gene

Drugs & Compounds for RPL7P38 Gene

No Compound Related Data Available

Transcripts for RPL7P38 Gene

mRNA/cDNA for RPL7P38 Gene

1 Ensembl transcripts including schematic representations, and UCSC links to gene/alias where relevant :

CRISPR Products

Alternative Splicing Database (ASD) splice patterns (SP) for RPL7P38 Gene

No ASD Table

Relevant External Links for RPL7P38 Gene

GeneLoc Exon Structure for
RPL7P38

Expression for RPL7P38 Gene

mRNA expression in normal human tissues from GTEx, Illumina, BioGPS, and SAGE for RPL7P38 Gene

genes like me logo Genes that share expression patterns with RPL7P38: view

Primer Products

No data available for mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , mRNA differential expression in normal tissues , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners , mRNA Expression by UniProt/SwissProt , Evidence on tissue expression from TISSUES and Phenotype-based relationships between genes and organs from Gene ORGANizer for RPL7P38 Gene

Orthologs for RPL7P38 Gene

Evolution for RPL7P38 Gene

ENSEMBL:
Gene Tree for RPL7P38 (if available)
TreeFam:
Gene Tree for RPL7P38 (if available)

No data available for Orthologs for RPL7P38 Gene

Paralogs for RPL7P38 Gene

No data available for Paralogs for RPL7P38 Gene

Variants for RPL7P38 Gene

Additional Variant Information for RPL7P38 Gene

SNPedia medical, phenotypic, and genealogical associations of SNPs for
RPL7P38

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Sequence variations, with clinical significance, from ClinVar and Humsavar, with links to dbSNP , Additional dbSNP identifiers (rs#s) , Structural Variations from Database of Genomic Variants (DGV) and Variation tolerance for RPL7P38 Gene

Disorders for RPL7P38 Gene

No disorders were found for RPL7P38 Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot , Genatlas and External Links for RPL7P38 Gene

Publications for RPL7P38 Gene

  1. Comparative analysis of processed ribosomal protein pseudogenes in four mammalian genomes. (PMID: 19123937) Balasubramanian S … Gerstein M (Genome biology 2009) 2 3 54

No data available for Mastermind for RPL7P38 Gene

Products for RPL7P38 Gene

Sources for RPL7P38 Gene