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Aliases for RPL7P21 Gene

Aliases for RPL7P21 Gene

  • Ribosomal Protein L7 Pseudogene 21 2 3 5
  • RPL7_10_623 3

External Ids for RPL7P21 Gene

Previous GeneCards Identifiers for RPL7P21 Gene

  • GC05P142679

Summaries for RPL7P21 Gene

GeneCards Summary for RPL7P21 Gene

RPL7P21 (Ribosomal Protein L7 Pseudogene 21) is a Pseudogene.

Additional gene information for RPL7P21 Gene

No data available for Entrez Gene Summary , CIViC summary , UniProtKB/Swiss-Prot , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , fRNAdb sequence ontologies and piRNA Summary for RPL7P21 Gene

Genomics for RPL7P21 Gene

GeneHancer (GH) Regulatory Elements for RPL7P21 Gene

Promoters and enhancers for RPL7P21 Gene
GeneHancer (GH) Identifier GH Type GH
Score
GH Sources Gene Association Score Total Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor
Binding Sites
Gene Targets
GH05I143318 Enhancer 0.9 FANTOM5 ENCODE dbSUPER 550.8 -1.2 -1235 0.5 JUND FOS RPL7P21 NR3C1 GC05P143260
GH05I143394 Promoter/Enhancer 2.5 EPDnew FANTOM5 Ensembl ENCODE dbSUPER 14.4 +81.0 80957 11.6 FEZF1 DMAP1 YY1 SLC30A9 ZNF213 ZNF143 SP3 NFYC ZNF610 GLIS1 NR3C1 RPL7P21 YIPF5 ENSG00000279130 ENSG00000279679
GH05I142724 Enhancer 1.2 FANTOM5 Ensembl ENCODE 21.2 -593.2 -593170 3 ZNF133 BATF ZBTB40 FOS ATF7 IKZF2 CEBPB HDAC8 MEF2D ATF4 RPL7P21 ARHGAP26-AS1 KIAA0141 ENSG00000271871 FGF1 LINC01844 ENSG00000261757
GH05I142314 Promoter/Enhancer 2.5 EPDnew Ensembl ENCODE dbSUPER 9.7 -997.9 -997874 13.8 HDGF PKNOX1 SMAD1 FOXA2 ARNT ARID4B SIN3A FEZF1 DMAP1 YY1 SPRY4 LOC102723915 HDAC3 FCHSD1 KIAA0141 ENSG00000271871 RPL7P21 PCDHGA11 LINC01844 ENSG00000261757
GH05I143142 Enhancer 1.2 Ensembl ENCODE dbSUPER 17.8 -176.2 -176152 2.3 FEZF1 ZNF302 ZSCAN5C ZNF391 FOS ZNF214 OVOL3 ZNF398 ZNF645 ZEB2 RPL7P21 ARHGAP26-IT1 GC05M142946 ARHGAP26
- Elite GeneHancer and/or Elite GeneHancer-gene association Download GeneHancer data dump

GeneHancers around RPL7P21 on UCSC Golden Path with GeneCards custom track

Genomic Locations for RPL7P21 Gene

Genomic Locations for RPL7P21 Gene
chr5:143,319,595-143,333,790
(GRCh38/hg38)
Size:
14,196 bases
Orientation:
Plus strand
chr5:142,699,160-142,713,355
(GRCh37/hg19)

Genomic View for RPL7P21 Gene

Genes around RPL7P21 on UCSC Golden Path with GeneCards custom track

Cytogenetic band:
RPL7P21 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for RPL7P21 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

RefSeq DNA sequence for RPL7P21 Gene

Proteins for RPL7P21 Gene

Post-translational modifications for RPL7P21 Gene

No Post-translational modifications

No data available for DME Specific Peptides for RPL7P21 Gene

Domains & Families for RPL7P21 Gene

Graphical View of Domain Structure for InterPro Entry

No data available for Gene Families , Protein Domains , Suggested Antigen Peptide Sequences and UniProtKB/Swiss-Prot for RPL7P21 Gene

Function for RPL7P21 Gene

Phenotypes From GWAS Catalog for RPL7P21 Gene

Animal Model Products

Clone Products

No data available for Molecular function , Enzyme Numbers (IUBMB) , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for RPL7P21 Gene

Localization for RPL7P21 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS , Subcellular locations from the Human Protein Atlas (HPA) and Gene Ontology (GO) - Cellular Components for RPL7P21 Gene

Pathways & Interactions for RPL7P21 Gene

SuperPathways for RPL7P21 Gene

No Data Available

Interacting Proteins for RPL7P21 Gene

Gene Ontology (GO) - Biological Process for RPL7P21 Gene

None

No data available for Pathways by source and SIGNOR curated interactions for RPL7P21 Gene

Drugs & Compounds for RPL7P21 Gene

No Compound Related Data Available

Transcripts for RPL7P21 Gene

mRNA/cDNA for RPL7P21 Gene

(1) Ensembl transcripts including schematic representations, and UCSC links where relevant :

Clone Products

Alternative Splicing Database (ASD) splice patterns (SP) for RPL7P21 Gene

No ASD Table

Relevant External Links for RPL7P21 Gene

GeneLoc Exon Structure for
RPL7P21
ECgene alternative splicing isoforms for
RPL7P21

Expression for RPL7P21 Gene

mRNA expression in normal human tissues from GTEx, Illumina, BioGPS, and CGAP SAGE for RPL7P21 Gene

NURSA nuclear receptor signaling pathways regulating expression of RPL7P21 Gene:

RPL7P21
genes like me logo Genes that share expression patterns with RPL7P21: view

No data available for mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , mRNA differential expression in normal tissues , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners , mRNA Expression by UniProt/SwissProt , Evidence on tissue expression from TISSUES and Phenotype-based relationships between genes and organs from Gene ORGANizer for RPL7P21 Gene

Orthologs for RPL7P21 Gene

Evolution for RPL7P21 Gene

ENSEMBL:
Gene Tree for RPL7P21 (if available)
TreeFam:
Gene Tree for RPL7P21 (if available)

No data available for Orthologs for RPL7P21 Gene

Paralogs for RPL7P21 Gene

No data available for Paralogs for RPL7P21 Gene

Variants for RPL7P21 Gene

Additional Variant Information for RPL7P21 Gene

SNPedia medical, phenotypic, and genealogical associations of SNPs for
RPL7P21

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Sequence variations from dbSNP and Humsavar , Structural Variations from Database of Genomic Variants (DGV) and Variation tolerance for RPL7P21 Gene

Disorders for RPL7P21 Gene

Additional Disease Information for RPL7P21

Genetic Association Database
(GAD)

No disorders were found for RPL7P21 Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot and Genatlas for RPL7P21 Gene

Publications for RPL7P21 Gene

  1. Comparative analysis of processed ribosomal protein pseudogenes in four mammalian genomes. (PMID: 19123937) Balasubramanian S … Gerstein M (Genome biology 2009) 2 3 58
  2. Genomewide pharmacogenomic study of metabolic side effects to antipsychotic drugs. (PMID: 20195266) Adkins DE … van den Oord EJ (Molecular psychiatry 2011) 44 58
  3. Genome-wide association study identifies variants in the MHC class I, IL10, and IL23R-IL12RB2 regions associated with Behçet's disease. (PMID: 20622878) Remmers EF … Gül A (Nature genetics 2010) 44 58

Products for RPL7P21 Gene

Sources for RPL7P21 Gene

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