Aliases for RPL7P11 Gene

Aliases for RPL7P11 Gene

  • Ribosomal Protein L7 Pseudogene 11 2 3 5
  • RPL7_1_6 3
  • RPL7P11 5

External Ids for RPL7P11 Gene

Previous GeneCards Identifiers for RPL7P11 Gene

  • GC01U902279
  • GC01P008810

Summaries for RPL7P11 Gene

GeneCards Summary for RPL7P11 Gene

RPL7P11 (Ribosomal Protein L7 Pseudogene 11) is a Pseudogene.

Additional gene information for RPL7P11 Gene

No data available for Entrez Gene Summary , CIViC Summary , UniProtKB/Swiss-Prot Summary , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , Rfam classification and piRNA Summary for RPL7P11 Gene

Genomics for RPL7P11 Gene

GeneHancer (GH) Regulatory Elements Pubs

Promoters and enhancers for RPL7P11 Gene
GeneHancer (GH) Identifier GH Type GH
Score
GH Sources Gene Association Score Total Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor
Binding Sites
Gene Targets
GH01J008749 Enhancer 0.4 Ensembl 250.7 -1.7 -1709 0.2 ZNF600 NFIC CEBPB HSALNG0000641 RPL7P11 RERE ENSG00000221083 lnc-ENO1-3 lnc-RERE-3 SLC45A1
GH01J008745 Enhancer 0.9 Ensembl ENCODE dbSUPER 0.7 -3.8 -3809 2 TCF7L2 CREM SOX5 ZNF398 PRDM4 MEIS2 GATA2 HNF1A MAX SPI1 ENSG00000221083 RPL7P11 lnc-ENO1-3 lnc-RERE-3 RERE SLC45A1
GH01J008739 Enhancer 1.3 Ensembl ENCODE dbSUPER 0.4 -9.4 -9384 3.5 SSRP1 KLF9 CEBPA ATF3 CHD4 YY1 MXD4 CEBPB FOXA1 KLF11 lnc-ENO1-3 RERE ENSG00000221083 RPL7P11 lnc-RERE-3 SLC45A1
- Elite GeneHancer and/or Elite GeneHancer-gene association Download GeneHancer data from 2017 publication | Request up-to-date GeneHancer data (full dataset)

GeneHancers around RPL7P11 on the GeneHancer Hub at the UCSC Golden Path

Genomic Locations for RPL7P11 Gene

Latest Assembly
chr1:8,750,410-8,751,091
(GRCh38/hg38)
Size:
682 bases
Orientation:
Plus strand

Previous Assembly
chr1:8,810,469-8,811,150
(GRCh37/hg19 by Entrez Gene)
Size:
682 bases
Orientation:
Plus strand

chr1:8,810,489-8,811,146
(GRCh37/hg19 by Ensembl)
Size:
658 bases
Orientation:
Plus strand

Genomic View for RPL7P11 Gene

Genes around RPL7P11 on UCSC Golden Path with GeneCards custom track

Cytogenetic band:
RPL7P11 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for RPL7P11 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

RefSeq DNA sequence for RPL7P11 Gene

Proteins for RPL7P11 Gene

Post-translational modifications for RPL7P11 Gene

No Post-translational modifications

No data available for DME Specific Peptides for RPL7P11 Gene

Domains & Families for RPL7P11 Gene

No data available for Gene Families , Protein Domains , Suggested Antigen Peptide Sequences , Graphical View of Domain Structure and UniProtKB/Swiss-Prot for RPL7P11 Gene

Function for RPL7P11 Gene

Phenotypes From GWAS Catalog for RPL7P11 Gene

No data available for Molecular function , Enzyme Numbers (IUBMB) , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for RPL7P11 Gene

Localization for RPL7P11 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS , Subcellular locations from the Human Protein Atlas (HPA) and Gene Ontology (GO) - Cellular Components for RPL7P11 Gene

Pathways & Interactions for RPL7P11 Gene

PathCards logo

SuperPathways for RPL7P11 Gene

No Data Available

Gene Ontology (GO) - Biological Process for RPL7P11 Gene

None

No data available for Pathways by source , Interacting Proteins and SIGNOR curated interactions for RPL7P11 Gene

Drugs & Compounds for RPL7P11 Gene

No Compound Related Data Available

Transcripts for RPL7P11 Gene

mRNA/cDNA for RPL7P11 Gene

1 Ensembl transcripts including schematic representations, and UCSC links to gene/alias where relevant :

Alternative Splicing Database (ASD) splice patterns (SP) for RPL7P11 Gene

No ASD Table

Relevant External Links for RPL7P11 Gene

GeneLoc Exon Structure for
RPL7P11

Expression for RPL7P11 Gene

mRNA expression in normal human tissues from GTEx, Illumina, BioGPS, and SAGE for RPL7P11 Gene

genes like me logo Genes that share expression patterns with RPL7P11: view

No data available for mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , mRNA differential expression in normal tissues , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners , mRNA Expression by UniProt/SwissProt , Evidence on tissue expression from TISSUES and Phenotype-based relationships between genes and organs from Gene ORGANizer for RPL7P11 Gene

Orthologs for RPL7P11 Gene

Evolution for RPL7P11 Gene

ENSEMBL:
Gene Tree for RPL7P11 (if available)
TreeFam:
Gene Tree for RPL7P11 (if available)
Alliance of Genome Resources:
Additional Orthologs for RPL7P11

No data available for Orthologs for RPL7P11 Gene

Paralogs for RPL7P11 Gene

No data available for Paralogs for RPL7P11 Gene

Variants for RPL7P11 Gene

Additional Variant Information for RPL7P11 Gene

SNPedia medical, phenotypic, and genealogical associations of SNPs for
RPL7P11
Leiden Open Variation Database (LOVD)
RPL7P11

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Sequence variations, with clinical significance, from ClinVar and Humsavar, with links to dbSNP , dbSNP identifiers (rs#s) for variants without ClinVar clinical significance , Structural Variations from Database of Genomic Variants (DGV) and Variation tolerance for RPL7P11 Gene

Disorders for RPL7P11 Gene

No disorders were found for RPL7P11 Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot , Genatlas and External Links for RPL7P11 Gene

Publications for RPL7P11 Gene

  1. Comparative analysis of processed ribosomal protein pseudogenes in four mammalian genomes. (PMID: 19123937) Balasubramanian S … Gerstein M (Genome biology 2009) 2 3

Products for RPL7P11 Gene

Sources for RPL7P11 Gene