Aliases for RPL7AP70 Gene

Aliases for RPL7AP70 Gene

  • Ribosomal Protein L7a Pseudogene 70 2 3
  • Ribosomal Protein L7a (RPL7A) Pseudogene 5
  • RPL7A_32_1739 3
  • AC000089.1 5

External Ids for RPL7AP70 Gene

Previous GeneCards Identifiers for RPL7AP70 Gene

  • GC22P018161

Summaries for RPL7AP70 Gene

GeneCards Summary for RPL7AP70 Gene

RPL7AP70 (Ribosomal Protein L7a Pseudogene 70) is a Pseudogene.

Additional gene information for RPL7AP70 Gene

No data available for Entrez Gene Summary , CIViC Summary , UniProtKB/Swiss-Prot Summary , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , Rfam classification and piRNA Summary for RPL7AP70 Gene

Genomics for RPL7AP70 Gene

GeneHancer (GH) Regulatory Elements Pubs

Promoters and enhancers for RPL7AP70 Gene
GeneHancer (GH) Identifier GH Type GH
Score
GH Sources Gene Association Score Total Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor
Binding Sites
Gene Targets
GH22J020494 Promoter/Enhancer 2.7 EPDnew FANTOM5 Ensembl ENCODE CraniofacialAtlas dbSUPER 72.2 +703.4 703426 3.4 RNF2 ARHGAP35 CREB1 GATAD2A CTCF HNRNPL ATF7 PRDM10 ZNF629 TFE3 MED15 KLHL22 LOC101928824 lnc-MED15-1 DGCR8 LZTR1 TRMT2A RPL7AP70 ENSG00000215493 THAP7-AS1
GH22J020506 Promoter/Enhancer 2.5 EPDnew FANTOM5 Ensembl ENCODE CraniofacialAtlas dbSUPER 35.4 +717.2 717227 5.8 CEBPG HNRNPL CREB1 PRDM10 ZNF629 TFE3 SIX5 SMAD2 ZNF692 POLR2A MED15 piR-38716-094 piR-41245-161 piR-58557-056 LZTR1 TRMT2A DGCR8 RPL7AP70 RPL8P5 ENSG00000215493
GH22J019958 Promoter/Enhancer 2.6 EPDnew FANTOM5 Ensembl ENCODE CraniofacialAtlas dbSUPER 33.7 +169.2 169213 6.4 HNRNPL GATAD2A CTCF PRDM10 REST TFE3 LEF1 IKZF1 NFKBIZ RCOR2 COMT NONHSAG033289.2 lnc-ARVCF-2 LINC01311 TRMT2A DGCR8 ENSG00000215493 RPL7AP70 DGCR11 MED15
GH22J020078 Promoter/Enhancer 2.6 EPDnew FANTOM5 Ensembl ENCODE CraniofacialAtlas dbSUPER 31.2 +289.2 289246 5.2 RNF2 ARHGAP35 SP1 HNRNPL GATAD2A ATF7 TEAD4 PRDM10 ZNF629 REST DGCR8 lnc-TRMT2A-3 TRMT2A LZTR1 MED15 UFD1 RPL7AP70 RPL8P5 RANBP1 LINC01311
GH22J019477 Promoter/Enhancer 2.2 EPDnew Ensembl ENCODE CraniofacialAtlas dbSUPER 31.2 -313.0 -312975 4.2 RNF2 ARHGAP35 SP1 CREB1 HNRNPL ATF7 REST PRDM10 ZNF629 ZNF512 UFD1 CDC45 DGCR8 TRMT2A RPL7AP70 DGCR11 LINC01311 RANBP1 ENSG00000273300 ENSG00000215493
- Elite GeneHancer and/or Elite GeneHancer-gene association Download GeneHancer data from 2017 publication | Request up-to-date GeneHancer data (full dataset)

GeneHancers around RPL7AP70 on the GeneHancer Hub at the UCSC Golden Path

Genomic Locations for RPL7AP70 Gene

Genomic Locations for RPL7AP70 Gene
chr22:19,792,275-19,793,154
(GRCh38/hg38)
Size:
880 bases
Orientation:
Plus strand
chr22:19,779,798-19,780,676
(GRCh37/hg19)
Size:
879 bases
Orientation:
Plus strand

Genomic View for RPL7AP70 Gene

Genes around RPL7AP70 on UCSC Golden Path with GeneCards custom track

Cytogenetic band:
RPL7AP70 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for RPL7AP70 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

RefSeq DNA sequence for RPL7AP70 Gene

Proteins for RPL7AP70 Gene

Post-translational modifications for RPL7AP70 Gene

No Post-translational modifications

No data available for DME Specific Peptides for RPL7AP70 Gene

Domains & Families for RPL7AP70 Gene

No data available for Gene Families , Protein Domains , Suggested Antigen Peptide Sequences , Graphical View of Domain Structure and UniProtKB/Swiss-Prot for RPL7AP70 Gene

Function for RPL7AP70 Gene

Phenotypes From GWAS Catalog for RPL7AP70 Gene

Animal Model Products

CRISPR Products

No data available for Molecular function , Enzyme Numbers (IUBMB) , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for RPL7AP70 Gene

Localization for RPL7AP70 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS , Subcellular locations from the Human Protein Atlas (HPA) and Gene Ontology (GO) - Cellular Components for RPL7AP70 Gene

Pathways & Interactions for RPL7AP70 Gene

PathCards logo

SuperPathways for RPL7AP70 Gene

No Data Available

Gene Ontology (GO) - Biological Process for RPL7AP70 Gene

None

No data available for Pathways by source , Interacting Proteins and SIGNOR curated interactions for RPL7AP70 Gene

Drugs & Compounds for RPL7AP70 Gene

No Compound Related Data Available

Transcripts for RPL7AP70 Gene

mRNA/cDNA for RPL7AP70 Gene

1 Ensembl transcripts including schematic representations, and UCSC links to gene/alias where relevant :

Alternative Splicing Database (ASD) splice patterns (SP) for RPL7AP70 Gene

No ASD Table

Relevant External Links for RPL7AP70 Gene

GeneLoc Exon Structure for
RPL7AP70

Expression for RPL7AP70 Gene

mRNA expression in normal human tissues from GTEx, Illumina, BioGPS, and SAGE for RPL7AP70 Gene

genes like me logo Genes that share expression patterns with RPL7AP70: view

No data available for mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , mRNA differential expression in normal tissues , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners , mRNA Expression by UniProt/SwissProt , Evidence on tissue expression from TISSUES and Phenotype-based relationships between genes and organs from Gene ORGANizer for RPL7AP70 Gene

Orthologs for RPL7AP70 Gene

Evolution for RPL7AP70 Gene

ENSEMBL:
Gene Tree for RPL7AP70 (if available)
TreeFam:
Gene Tree for RPL7AP70 (if available)

No data available for Orthologs for RPL7AP70 Gene

Paralogs for RPL7AP70 Gene

No data available for Paralogs for RPL7AP70 Gene

Variants for RPL7AP70 Gene

Additional Variant Information for RPL7AP70 Gene

SNPedia medical, phenotypic, and genealogical associations of SNPs for
RPL7AP70

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Sequence variations, with clinical significance, from ClinVar and Humsavar, with links to dbSNP , Additional dbSNP identifiers (rs#s) , Structural Variations from Database of Genomic Variants (DGV) and Variation tolerance for RPL7AP70 Gene

Disorders for RPL7AP70 Gene

No disorders were found for RPL7AP70 Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot , Genatlas and External Links for RPL7AP70 Gene

Publications for RPL7AP70 Gene

  1. Comparative analysis of processed ribosomal protein pseudogenes in four mammalian genomes. (PMID: 19123937) Balasubramanian S … Gerstein M (Genome biology 2009) 2 3

No data available for Mastermind for RPL7AP70 Gene

Products for RPL7AP70 Gene

Sources for RPL7AP70 Gene