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Aliases for RPL7AP48 Gene
Aliases for RPL7AP48 Gene
External Ids for RPL7AP48 Gene
- HGNC: 35953
- Entrez Gene: 100271212
- Ensembl: ENSG00000237088
Previous GeneCards Identifiers for RPL7AP48 Gene
- GC09U901224
Summaries for RPL7AP48 Gene
GeneCards Summary for RPL7AP48 Gene
RPL7AP48 (Ribosomal Protein L7a Pseudogene 48) is a Pseudogene.
Additional gene information for RPL7AP48 Gene
No data available for Entrez Gene Summary , CIViC Summary , UniProtKB/Swiss-Prot Summary , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , Rfam classification and piRNA Summary for RPL7AP48 Gene
Genomics for RPL7AP48 Gene
GeneHancer (GH) Regulatory Elements Pubs
Promoters and enhancers for RPL7AP48 Gene
| GeneHancer (GH) Identifier | GH Type | GH Score |
GH Sources | Gene Association Score | Total Score | TSS distance (kb) | Number of Genes Away | Size (kb) | Transcription Factor Binding Sites |
Gene Targets |
|---|---|---|---|---|---|---|---|---|---|---|
| GH09J020532 | Enhancer | 0.2 | FANTOM5 | 600.7 | -0.1 | -60 | 0.1 | RPL7AP48 MLLT3 MIR4474 SLC24A2 | ||
| GH09J020533 | Enhancer | 0.2 | Ensembl | 600.7 | +0.4 | 375 | 0.6 | RPL7AP48 piR-32023-251 MLLT3 SLC24A2 | ||
| GH09J020526 | Enhancer | 0.7 | Ensembl | 0.7 | -3.8 | -3825 | 5 | TEAD4 PKNOX1 CEBPA SOX13 CTCF ARID3A RELB RUNX3 ELF1 BATF | RPL7AP48 MIR4474 MLLT3 SLC24A2 | |
| GH09J020511 | Enhancer | 0.8 | Ensembl ENCODE | 0.4 | -18.6 | -18626 | 5 | PRDM10 ZNF600 SP1 ZNF23 ZBTB17 EP300 STAT1 RCOR1 MAFK NR2C2 | MLLT3 MIR4474 RPL7AP48 SLC24A2 | |
| GH09J020505 | Enhancer | 0.8 | Ensembl ENCODE | 0.3 | -25.4 | -25353 | 6.3 | FOXA1 PRDM1 SCRT2 CEBPB DPF2 CTBP1 ZSCAN5C OSR2 ZBTB17 WT1 | MIR4474 RPL7AP48 MLLT3 SLC24A2 |
- Elite GeneHancer and/or Elite GeneHancer-gene association
Download GeneHancer data from 2017 publication |
Request up-to-date GeneHancer data (full dataset)
GeneHancers around RPL7AP48 on the GeneHancer Hub at the UCSC Golden Path
Genomic Locations for RPL7AP48 Gene
Genomic Locations for RPL7AP48 Gene
- chr9:20,532,526-20,533,399
- (GRCh38/hg38)
- Size:
- 874 bases
- Orientation:
- Plus strand
- chr9:20,532,524-20,533,396
- (GRCh37/hg19)
- Size:
- 873 bases
- Orientation:
- Plus strand
Genomic View for RPL7AP48 Gene
Genes around RPL7AP48 on UCSC Golden Path with GeneCards custom track
- Cytogenetic band:
-
- 9p22 by HGNC
- 9p21.3 by Entrez Gene
- 9p21.3 by Ensembl
RPL7AP48 Gene in genomic location: bands according to
Ensembl, locations according to GeneLoc
(and/or Entrez Gene and/or Ensembl if different)
Genomic Neighborhood
• Exon Structure
• Gene Density
RefSeq DNA sequence for RPL7AP48 Gene
Proteins for RPL7AP48 Gene
Post-translational modifications for RPL7AP48 Gene
No Post-translational modifications
Antibody Products
Protein Products
- Search Origene for Purified Proteins, MassSpec and Protein Over-expression Lysates for RPL7AP48
- Origene Custom Protein Services for RPL7AP48
No data available for DME Specific Peptides for RPL7AP48 Gene
Domains & Families for RPL7AP48 Gene
No data available for Gene Families , Protein Domains , Suggested Antigen Peptide Sequences , Graphical View of Domain Structure and UniProtKB/Swiss-Prot for RPL7AP48 Gene
Function for RPL7AP48 Gene
Animal Model Products
- Taconic Biosciences: Generate A Custom CRISPR Mouse Model For Your Study
CRISPR Products
- Applied Biological Materials (abm): CRISPR Clones for RPL7AP48 - Select products 50% OFF >
- * RPL7AP48 CRISPR as ready-to-use vector or virus: ORF | Lenti- | Adeno- | AAV- | Protein Vector - Browse All
- * Gene synthesis, site-directed mutagenesis, subcloning, and more services - Browse All
- Browse CRISPR knockouts for RPL7AP48
miRNA Products
Inhibitory RNA Products
Clone Products
No data available for Molecular function , Enzyme Numbers (IUBMB) , Phenotypes From GWAS Catalog , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for RPL7AP48 Gene
Localization for RPL7AP48 Gene
No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS , Subcellular locations from the Human Protein Atlas (HPA) and Gene Ontology (GO) - Cellular Components for RPL7AP48 Gene
Transcripts for RPL7AP48 Gene
mRNA/cDNA for RPL7AP48 Gene
- 1 Ensembl transcripts including schematic representations, and UCSC links to gene/alias where relevant :
-
- ENST00000444895 788 nts (view in UCSC)
CRISPR Products
- Applied Biological Materials (abm): CRISPR Clones for RPL7AP48 - Select products 50% OFF >
- * RPL7AP48 CRISPR as ready-to-use vector or virus: ORF | Lenti- | Adeno- | AAV- | Protein Vector - Browse All
- * Gene synthesis, site-directed mutagenesis, subcloning, and more services - Browse All
- Browse CRISPR knockouts for RPL7AP48
miRNA Products
Inhibitory RNA Products
Clone Products
Relevant External Links for RPL7AP48 Gene
- GeneLoc Exon Structure for
- RPL7AP48
Expression for RPL7AP48 Gene
Primer Products
No data available for mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , mRNA differential expression in normal tissues , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners , mRNA Expression by UniProt/SwissProt , Evidence on tissue expression from TISSUES and Phenotype-based relationships between genes and organs from Gene ORGANizer for RPL7AP48 Gene
Orthologs for RPL7AP48 Gene
No data available for Orthologs for RPL7AP48 Gene
Paralogs for RPL7AP48 Gene
No data available for Paralogs for RPL7AP48 Gene
Variants for RPL7AP48 Gene
Additional Variant Information for RPL7AP48 Gene
- SNPedia medical, phenotypic, and genealogical associations of SNPs for
- RPL7AP48
No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Sequence variations, with clinical significance, from ClinVar and Humsavar, with links to dbSNP , Additional dbSNP identifiers (rs#s) , Structural Variations from Database of Genomic Variants (DGV) and Variation tolerance for RPL7AP48 Gene
Disorders for RPL7AP48 Gene
Additional Disease Information for RPL7AP48
- Genetic Association Database
- (GAD)
No disorders were found for RPL7AP48 Gene.
No data available for MalaCards , UniProtKB/Swiss-Prot and Genatlas for RPL7AP48 Gene
Publications for RPL7AP48 Gene
- Comparative analysis of processed ribosomal protein pseudogenes in four mammalian genomes. (PMID: 19123937) Balasubramanian S … Gerstein M (Genome biology 2009) 2 3
- A genome-wide association for kidney function and endocrine-related traits in the NHLBI's Framingham Heart Study. (PMID: 17903292) Hwang SJ … Fox CS (BMC medical genetics 2007) 41
No data available for Mastermind for RPL7AP48 Gene
Products for RPL7AP48 Gene
- Browse OriGene Antibodies
- Custom Antibody Services
- Browse OriGene ELISA Kits
- Custom Assay Services
- Search Origene for Purified Proteins, MassSpec and Protein Over-expression Lysates for RPL7AP48
- Origene Custom Protein Services for RPL7AP48
- Browse OriGene Inhibitory RNA Products For RPL7AP48
- Browse OriGene qPCR primer pairs and template standards
- Browse CRISPR knockouts for RPL7AP48
- Custom cloning services - gene synthesis, subcloning, mutagenesis, variant library, vector shuttling
- Browse OriGene miRNA Products For RPL7AP48
- Browse Sino Biological cDNA Clones
- Browse Sino Biological Recombinant Proteins
- Browse Sino Biological Cell Lysates
- Browse Sino Biological Antibodies
- Browse Sino Biological Assays
- Browse ELISA Kits
- Browse CRO Services
- High-throughput Antibody Production Service
- Protein Production Service
- Epitope Tag Antibodies & Reporter Protein Antibodies
- Lentiviral ORF Clones
- Browse GeneCopoeia Cell Lines
- Search GeneCopoeia for knockout CRISPR/Cas9 clones, lentivirus, and/or AAV products for RPL7AP48
- Search GeneCopoeia for ORF cDNA, lentivirus, AAV viral particles, and/or promoter clone products for RPL7AP48
- Search GeneCopoeia for miRNA 3'UTR Target clone products for RPL7AP48
- Search GeneCopoeia for shRNA, lentivirus, and/or AAV clone products for RPL7AP48
Sources for RPL7AP48 Gene
- (1) GeneCards
- (2) HGNC
- (3) NCBI Entrez Gene
- (4) UniProtKB/Swiss-Prot
- (5) Ensembl
- (6) OMIM
- (7) GeneLoc
- (8) Gene Wiki
- (9) UCSC
- (10) PhosphoSitePlus
- (11) Cell Signaling Technology
- (12) GO
- (13) UniProtKB/TrEMBL
- (14) InterPro
- (15) ProtoNet
- (16) Blocks
- (17) MGI
- (18) IUBMB
- (19) KEGG
- (20) MINT
- (21) STRING
- (22) IntAct
- (23) Novoseek
- (24) PharmGKB
- (25) DrugBank
- (26) HMDB
- (27) ASD
- (28) SAGE
- (29) SOURCE
- (30) HomoloGene
- (31) PanEnsembl
- (32) euGenes
- (33) SGD
- (34) FlyBase
- (35) WormBase
- (36) Pseudogene
- (37) DGV
- (38) dbSNP
- (39) GenAtlas
- (40) HGMD
- (41) GAD
- (42) BGMUT
- (43) HuGE
- (44) Atlas
- (45) GenBank
- (46) HORDE
- (47) HUGE
- (48) IMGT
- (49) Leiden
- (50) miRBase
- (51) DME
- (52) OriGene
- (53) PubMed
- (54) R&D Systems
- (55) TGDB
- (56) Tocris
- (57) Abcam
- (58) Novus Biologicals
- (59) ProSpec
- (60) Sino Biological
- (61) GenScript
- (62) Qiagen
- (63) OCA
- (64) Proteopedia
- (65) MOPED
- (66) neXtProt
- (67) Reactome
- (68) GeneGo (Thomson Reuters)
- (69) DISEASES
- (70) SIMAP
- (71) GenomeRNAi
- (72) LifeMap
- (73) miRTarBase
- (74) MalaCards
- (75) Invitrogen
- (76) BitterDB
- (77) ESI-BIO
- (78) RefSeq
- (79) BioSystems
- (80) MaxQB
- (81) IUPHAR
- (82) BioGPS
- (83) Illumina
- (84) COMPARTMENTS
- (85) HOMER
- (86) PaxDb
- (87) ApexBio
- (88) Addgene
- (89) antibodies-online
- (90) CYP
- (91) NONCODE
- (92) TreeFam
- (93) PathCards
- (94) GeneReviews
- (95) GeneTex
- (96) Taconic Biosciences
- (97) GTEx
- (98) ProteomicsDB
- (99) SCBT
- (100) DGIdb
- (101) ClinicalTrials
- (102) RVIS
- (103) SIGNOR
- (104) diseasecard
- (105) NIH Rare Diseases
- (106) Orphanet
- (107) UMLS
- (108) GTR
- (109) Disease Ontology
- (110) Genetics Home Reference
- (111) MeSH
- (112) MedlinePlus
- (113) CDC
- (114) NINDS
- (115) NCBI Bookshelf
- (116) ClinVar
- (117) Gene Damage Index
- (118) HPO
- (119) UDN
- (120) VISTA
- (121) FANTOM5
- (122) ENCODE
- (123) ProSci
- (124) Horizon
- (125) The Signaling Pathways Project (SPP)
- (126) IID
- (127) VectorBuilder
- (128) SNPedia
- (129) BRCA Exchange
- (130) CIViC
- (131) ProteoGenix
- (132) dbSUPER
- (133) TISSUES
- (134) Gene ORGANizer
- (135) abm
- (136) Human Protein Atlas
- (137) GWAS Catalog
- (138) Monarch Initiative
- (139) DataMed
- (140) HumanCyc
- (141) UCNEbase
- (142) EPDnew
- (143) Applied Biosystems
- (144) GlyConnect
- (145) Aminode
- (146) GeneCopoeia
- (147) GPS-Prot
- (148) RNACentral
- (149) LncRNADisease
- (150) LOVD
- (151) miR2Disease
- (152) DiseaseEnhancer
- (153) Boster Bio
- (154) Biorbyt
- (155) Biocompare
- (156) Mastermind
- (157) CTD^2 Dashboard
- (158) CraniofacialAtlas
- (159) GeneImprint
- (160) Synthego
- (161) ENA
- (162) GtRNAdb
- (163) LncBase
- (164) LncBook
- (165) LNCipedia
- (166) Modomics
- (167) PDBe
- (168) Rfam
- (169) SILVA
- (170) snOPY
- (171) SRPDB
- (172) GENCODE
- (173) TarBase
- (174) Signalway Antibody
- (175) Open Targets Platform
- (176) 5SRRNADB
- (177) snoDB
- (178) MirGeneDB