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Aliases for RPL7AP47 Gene

Aliases for RPL7AP47 Gene

  • Ribosomal Protein L7a Pseudogene 47 2 3
  • RPL7A_13_964 3
  • AL441963.1 5

External Ids for RPL7AP47 Gene

Previous GeneCards Identifiers for RPL7AP47 Gene

  • GC09U901239

Summaries for RPL7AP47 Gene

GeneCards Summary for RPL7AP47 Gene

RPL7AP47 (Ribosomal Protein L7a Pseudogene 47) is a Pseudogene.

Additional gene information for RPL7AP47 Gene

No data available for Entrez Gene Summary , CIViC summary , UniProtKB/Swiss-Prot , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , fRNAdb sequence ontologies and piRNA Summary for RPL7AP47 Gene

Genomics for RPL7AP47 Gene

GeneHancer (GH) Regulatory Elements for RPL7AP47 Gene

Promoters and enhancers for RPL7AP47 Gene
GeneHancer (GH) Identifier GH Type GH
Score
GH Sources Gene Association Score Total Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor
Binding Sites
Gene Targets
GH09I014203 Enhancer 1.5 UCNEbase Ensembl ENCODE dbSUPER 550.8 -0.4 -407 1.6 FOXA2 MAX FEZF1 RAD21 YY1 E2F1 ZNF335 ZNF316 HNF4G MAFK RPL7AP47 GC09P014098 NFIB
GH09I014205 Enhancer 1 Ensembl ENCODE dbSUPER 550.8 +1.8 1757 1.4 SP1 JUND ZNF362 POLR2A JUN CEBPB FOSL2 EP300 RPL7AP47 GC09P014255 NFIB
GH09I014204 Enhancer 0.2 Ensembl 550.8 +0.7 683 0.2 RPL7AP47 GC09P014255 NFIB
GH09I014212 Enhancer 1.3 FANTOM5 Ensembl ENCODE dbSUPER 0.4 +9.4 9353 1.7 NRF1 ELF1 ZBTB8A OSR2 SP1 GATA3 JUND PRDM6 ZSCAN5C ZNF580 NFIB RPL7AP47 GC09P014255
GH09I014209 Enhancer 1.3 UCNEbase dbSUPER 0.4 +5.3 5302 0.2 PKNOX1 NFIB ZSCAN4 INSM2 MZF1 ZNF76 ZNF195 FEZF1 ZNF213 ZNF366 CDCA4P1 ZDHHC21 MPDZ ENSG00000272871 RPL7AP47 GC09P014255 NFIB
- Elite GeneHancer and/or Elite GeneHancer-gene association Download GeneHancer data dump

GeneHancers around RPL7AP47 on UCSC Golden Path with GeneCards custom track

Genomic Locations for RPL7AP47 Gene

Genomic Locations for RPL7AP47 Gene
chr9:14,204,218-14,205,094
(GRCh38/hg38)
Size:
877 bases
Orientation:
Plus strand
chr9:14,204,217-14,205,093
(GRCh37/hg19)

Genomic View for RPL7AP47 Gene

Genes around RPL7AP47 on UCSC Golden Path with GeneCards custom track

Cytogenetic band:
RPL7AP47 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for RPL7AP47 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

RefSeq DNA sequence for RPL7AP47 Gene

Proteins for RPL7AP47 Gene

Post-translational modifications for RPL7AP47 Gene

No Post-translational modifications

No data available for DME Specific Peptides for RPL7AP47 Gene

Domains & Families for RPL7AP47 Gene

Graphical View of Domain Structure for InterPro Entry

No data available for Gene Families , Protein Domains , Suggested Antigen Peptide Sequences and UniProtKB/Swiss-Prot for RPL7AP47 Gene

Function for RPL7AP47 Gene

Phenotypes From GWAS Catalog for RPL7AP47 Gene

Animal Model Products

Clone Products

No data available for Molecular function , Enzyme Numbers (IUBMB) , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for RPL7AP47 Gene

Localization for RPL7AP47 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS , Subcellular locations from the Human Protein Atlas (HPA) and Gene Ontology (GO) - Cellular Components for RPL7AP47 Gene

Pathways & Interactions for RPL7AP47 Gene

SuperPathways for RPL7AP47 Gene

No Data Available

Interacting Proteins for RPL7AP47 Gene

Gene Ontology (GO) - Biological Process for RPL7AP47 Gene

None

No data available for Pathways by source and SIGNOR curated interactions for RPL7AP47 Gene

Drugs & Compounds for RPL7AP47 Gene

No Compound Related Data Available

Transcripts for RPL7AP47 Gene

mRNA/cDNA for RPL7AP47 Gene

(1) Ensembl transcripts including schematic representations, and UCSC links where relevant :

Clone Products

Alternative Splicing Database (ASD) splice patterns (SP) for RPL7AP47 Gene

No ASD Table

Relevant External Links for RPL7AP47 Gene

GeneLoc Exon Structure for
RPL7AP47
ECgene alternative splicing isoforms for
RPL7AP47

Expression for RPL7AP47 Gene

mRNA expression in normal human tissues from GTEx, Illumina, BioGPS, and CGAP SAGE for RPL7AP47 Gene

mRNA differential expression in normal tissues according to GTEx for RPL7AP47 Gene

This gene is overexpressed in Testis (x4.6).

NURSA nuclear receptor signaling pathways regulating expression of RPL7AP47 Gene:

RPL7AP47
genes like me logo Genes that share expression patterns with RPL7AP47: view

No data available for mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners , mRNA Expression by UniProt/SwissProt , Evidence on tissue expression from TISSUES and Phenotype-based relationships between genes and organs from Gene ORGANizer for RPL7AP47 Gene

Orthologs for RPL7AP47 Gene

Evolution for RPL7AP47 Gene

ENSEMBL:
Gene Tree for RPL7AP47 (if available)
TreeFam:
Gene Tree for RPL7AP47 (if available)

No data available for Orthologs for RPL7AP47 Gene

Paralogs for RPL7AP47 Gene

No data available for Paralogs for RPL7AP47 Gene

Variants for RPL7AP47 Gene

Additional Variant Information for RPL7AP47 Gene

SNPedia medical, phenotypic, and genealogical associations of SNPs for
RPL7AP47

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Sequence variations from dbSNP and Humsavar , Structural Variations from Database of Genomic Variants (DGV) and Variation tolerance for RPL7AP47 Gene

Disorders for RPL7AP47 Gene

Additional Disease Information for RPL7AP47

Genetic Association Database
(GAD)

No disorders were found for RPL7AP47 Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot and Genatlas for RPL7AP47 Gene

Publications for RPL7AP47 Gene

  1. Comparative analysis of processed ribosomal protein pseudogenes in four mammalian genomes. (PMID: 19123937) Balasubramanian S … Gerstein M (Genome biology 2009) 2 3 58
  2. Novel associations for hypothyroidism include known autoimmune risk loci. (PMID: 22493691) Eriksson N … Do CB (PloS one 2012) 44 58
  3. Genomewide association study of a rapid progression cohort identifies new susceptibility alleles for AIDS (ANRS Genomewide Association Study 03). (PMID: 19754311) Le Clerc S … Zagury JF (The Journal of infectious diseases 2009) 44 58

Products for RPL7AP47 Gene

Sources for RPL7AP47 Gene

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