Aliases for RPL7AP44 Gene

Aliases for RPL7AP44 Gene

  • Ribosomal Protein L7a Pseudogene 44 2 3
  • Ribosomal Protein L7a (RPL7A) Pseudogene 5
  • RPL7A_21_1001 3
  • AL512593.1 5

External Ids for RPL7AP44 Gene

Previous GeneCards Identifiers for RPL7AP44 Gene

  • GC09U901227
  • GC09M109742

Summaries for RPL7AP44 Gene

GeneCards Summary for RPL7AP44 Gene

RPL7AP44 (Ribosomal Protein L7a Pseudogene 44) is a Pseudogene.

Additional gene information for RPL7AP44 Gene

No data available for Entrez Gene Summary , CIViC Summary , UniProtKB/Swiss-Prot Summary , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , Rfam classification and piRNA Summary for RPL7AP44 Gene

Genomics for RPL7AP44 Gene

GeneHancer (GH) Regulatory Elements Pubs

Promoters and enhancers for RPL7AP44 Gene
GeneHancer (GH) Identifier GH Type GH
Score
GH Sources Gene Association Score Total Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor
Binding Sites
Gene Targets
GH09J106980 Enhancer 0.7 Ensembl 250.7 -1.1 -1125 0.2 ATF2 BCL11A TRIM22 MAX BHLHE40 ZNF24 IKZF1 BMI1 NR2F1 BACH1 RPL7AP44 ZNF462 HSALNG0073497 LOC340512 RAD23B
GH09J106969 Enhancer 0.8 Ensembl ENCODE CraniofacialAtlas 0.4 +9.2 9175 2 MAFF ZNF316 MAFK CEBPB ZNF462 RPL7AP44 HSALNG0073495 RAD23B
GH09J106961 Enhancer 0.9 Ensembl ENCODE 0.4 +17.5 17480 4.6 ATF2 CEBPB TRIM22 JUND ELF1 ZNF24 IKZF1 RAD21 TCF7 BACH1 ZNF462 RPL7AP44 HSALNG0073495 RAD23B
GH09J106952 Enhancer 0.8 Ensembl ENCODE 0.3 +26.3 26296 1.6 CEBPB ZNF217 EP300 CTBP1 CUX1 SMC3 STAT3 TCF7L2 FOXA1 MAZ HSALNG0073495 RPL7AP44 ZNF462 RAD23B
GH09J106964 Enhancer 0.6 ENCODE 0.4 +15.1 15061 0.2 TRIM22 ELF1 ZNF24 IKZF1 TCF7 BACH1 ZNF217 PKNOX1 IKZF2 MTA2 ZNF462 RPL7AP44 HSALNG0073495 RAD23B
- Elite GeneHancer and/or Elite GeneHancer-gene association Download GeneHancer data from 2017 publication | Request up-to-date GeneHancer data (full dataset)

GeneHancers around RPL7AP44 on the GeneHancer Hub at the UCSC Golden Path

Genomic Locations for RPL7AP44 Gene

Latest Assembly
chr9:106,978,725-106,979,576
(GRCh38/hg38)
Size:
852 bases
Orientation:
Minus strand

Previous Assembly
chr9:109,741,006-109,741,857
(GRCh37/hg19 by Entrez Gene)
Size:
852 bases
Orientation:
Minus strand

chr9:109,741,057-109,741,835
(GRCh37/hg19 by Ensembl)
Size:
779 bases
Orientation:
Minus strand

Genomic View for RPL7AP44 Gene

Genes around RPL7AP44 on UCSC Golden Path with GeneCards custom track

Cytogenetic band:
RPL7AP44 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for RPL7AP44 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

RefSeq DNA sequence for RPL7AP44 Gene

Proteins for RPL7AP44 Gene

Post-translational modifications for RPL7AP44 Gene

No Post-translational modifications

No data available for DME Specific Peptides for RPL7AP44 Gene

Domains & Families for RPL7AP44 Gene

No data available for Gene Families , Protein Domains , Suggested Antigen Peptide Sequences , Graphical View of Domain Structure and UniProtKB/Swiss-Prot for RPL7AP44 Gene

Function for RPL7AP44 Gene

Phenotypes From GWAS Catalog for RPL7AP44 Gene

No data available for Molecular function , Enzyme Numbers (IUBMB) , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for RPL7AP44 Gene

Localization for RPL7AP44 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS , Subcellular locations from the Human Protein Atlas (HPA) and Gene Ontology (GO) - Cellular Components for RPL7AP44 Gene

Pathways & Interactions for RPL7AP44 Gene

PathCards logo

SuperPathways for RPL7AP44 Gene

No Data Available

Gene Ontology (GO) - Biological Process for RPL7AP44 Gene

None

No data available for Pathways by source , Interacting Proteins and SIGNOR curated interactions for RPL7AP44 Gene

Drugs & Compounds for RPL7AP44 Gene

No Compound Related Data Available

Transcripts for RPL7AP44 Gene

mRNA/cDNA for RPL7AP44 Gene

1 Ensembl transcripts including schematic representations, and UCSC links to gene/alias where relevant :

Alternative Splicing Database (ASD) splice patterns (SP) for RPL7AP44 Gene

No ASD Table

Relevant External Links for RPL7AP44 Gene

GeneLoc Exon Structure for
RPL7AP44

Expression for RPL7AP44 Gene

mRNA expression in normal human tissues from GTEx, Illumina, BioGPS, and SAGE for RPL7AP44 Gene

genes like me logo Genes that share expression patterns with RPL7AP44: view

No data available for mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , mRNA differential expression in normal tissues , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners , mRNA Expression by UniProt/SwissProt , Evidence on tissue expression from TISSUES and Phenotype-based relationships between genes and organs from Gene ORGANizer for RPL7AP44 Gene

Orthologs for RPL7AP44 Gene

Evolution for RPL7AP44 Gene

ENSEMBL:
Gene Tree for RPL7AP44 (if available)
TreeFam:
Gene Tree for RPL7AP44 (if available)
Alliance of Genome Resources:
Additional Orthologs for RPL7AP44

No data available for Orthologs for RPL7AP44 Gene

Paralogs for RPL7AP44 Gene

No data available for Paralogs for RPL7AP44 Gene

Variants for RPL7AP44 Gene

Additional Variant Information for RPL7AP44 Gene

SNPedia medical, phenotypic, and genealogical associations of SNPs for
RPL7AP44
Leiden Open Variation Database (LOVD)
RPL7AP44

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Sequence variations, with clinical significance, from ClinVar and Humsavar, with links to dbSNP , dbSNP identifiers (rs#s) for variants without ClinVar clinical significance , Structural Variations from Database of Genomic Variants (DGV) and Variation tolerance for RPL7AP44 Gene

Disorders for RPL7AP44 Gene

No disorders were found for RPL7AP44 Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot , Genatlas and External Links for RPL7AP44 Gene

Publications for RPL7AP44 Gene

  1. Comparative analysis of processed ribosomal protein pseudogenes in four mammalian genomes. (PMID: 19123937) Balasubramanian S … Gerstein M (Genome biology 2009) 2 3
  2. A genome-wide association study of sporadic ALS in a homogenous Irish population. (PMID: 18057069) Cronin S … Hardiman O (Human molecular genetics 2008) 40

No data available for Mastermind for RPL7AP44 Gene

Products for RPL7AP44 Gene

Sources for RPL7AP44 Gene