Aliases for RPL7AP38 Gene

Aliases for RPL7AP38 Gene

  • Ribosomal Protein L7a Pseudogene 38 2 3 5
  • RPL7A_11_798 3

External Ids for RPL7AP38 Gene

Summaries for RPL7AP38 Gene

GeneCards Summary for RPL7AP38 Gene

RPL7AP38 (Ribosomal Protein L7a Pseudogene 38) is a Pseudogene.

Additional gene information for RPL7AP38 Gene

No data available for Entrez Gene Summary , CIViC Summary , UniProtKB/Swiss-Prot Summary , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , Rfam classification and piRNA Summary for RPL7AP38 Gene

Genomics for RPL7AP38 Gene

GeneHancer (GH) Regulatory Elements for RPL7AP38 Gene

Promoters and enhancers for RPL7AP38 Gene
GeneHancer (GH) Identifier GH Type GH
Score
GH Sources Gene Association Score Total Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor
Binding Sites
Gene Targets
GH07J026909 Enhancer 0.9 Ensembl ENCODE 0.4 -10.8 -10807 4.6 NR2F1 NR2F6 MYC MAX ELF3 PKNOX1 CEBPA SMARCC1 GATAD2A RXRB HOTAIRM1 SKAP2 HOXA2 HOXA-AS2 HOXA3 piR-48772-025 RPL7AP38
GH07J026942 Enhancer 0.7 Ensembl 0.3 +21.7 21693 2.8 ZNF680 ZNF404 ZNF560 ZBTB8A ZNF629 RBAK ZXDB ZBTB48 ZNF580 ZNF623 HNRNPA2B1 HOTAIRM1 NFE2L3 SKAP2 HOXA1 piR-33804-081 RPL7AP38
GH07J026918 Enhancer 0.3 Ensembl ENCODE 0.6 -2.5 -2478 3.1 HOTAIRM1 SKAP2 HOXA1 HOXA2 RPL7AP38 piR-48772-025
GH07J026930 Enhancer 0.4 Ensembl 0.4 +8.4 8393 1 MAFK ZNF316 GATA3 HOXA2 HOXA-AS2 HOXA3 HOTAIRM1 HOXA1 RPL7AP38 piR-33804-081 SKAP2
GH07J026928 Enhancer 0.3 Ensembl 0.4 +7.0 6993 0.6 GATA3 HOTAIRM1 HOXA3 HOXA2 HOXA-AS2 HOXA1 RPL7AP38 piR-33804-081 SKAP2
- Elite GeneHancer and/or Elite GeneHancer-gene association Download GeneHancer data from 2017 publication | Request up-to-date GeneHancer data (full dataset)

GeneHancers around RPL7AP38 on UCSC Golden Path with GeneCards custom track

Genomic Locations for RPL7AP38 Gene

Genomic Locations for RPL7AP38 Gene
chr7:26,922,108-26,922,966
(GRCh38/hg38)
Size:
859 bases
Orientation:
Plus strand
chr7:26,961,723-26,962,585
(GRCh37/hg19)
Size:
863 bases
Orientation:
Plus strand

Genomic View for RPL7AP38 Gene

Genes around RPL7AP38 on UCSC Golden Path with GeneCards custom track

Cytogenetic band:
RPL7AP38 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for RPL7AP38 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

RefSeq DNA sequence for RPL7AP38 Gene

Proteins for RPL7AP38 Gene

Post-translational modifications for RPL7AP38 Gene

No Post-translational modifications

No data available for DME Specific Peptides for RPL7AP38 Gene

Domains & Families for RPL7AP38 Gene

No data available for Gene Families , Protein Domains , Suggested Antigen Peptide Sequences , Graphical View of Domain Structure and UniProtKB/Swiss-Prot for RPL7AP38 Gene

Function for RPL7AP38 Gene

Animal Model Products

CRISPR Products

No data available for Molecular function , Enzyme Numbers (IUBMB) , Phenotypes From GWAS Catalog , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for RPL7AP38 Gene

Localization for RPL7AP38 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS , Subcellular locations from the Human Protein Atlas (HPA) and Gene Ontology (GO) - Cellular Components for RPL7AP38 Gene

Pathways & Interactions for RPL7AP38 Gene

PathCards logo

SuperPathways for RPL7AP38 Gene

No Data Available

Gene Ontology (GO) - Biological Process for RPL7AP38 Gene

None

No data available for Pathways by source and SIGNOR curated interactions for RPL7AP38 Gene

Drugs & Compounds for RPL7AP38 Gene

No Compound Related Data Available

Transcripts for RPL7AP38 Gene

mRNA/cDNA for RPL7AP38 Gene

(1) Ensembl transcripts including schematic representations, and UCSC links to gene/alias where relevant :

CRISPR Products

Alternative Splicing Database (ASD) splice patterns (SP) for RPL7AP38 Gene

No ASD Table

Relevant External Links for RPL7AP38 Gene

GeneLoc Exon Structure for
RPL7AP38
ECgene alternative splicing isoforms for
RPL7AP38

Expression for RPL7AP38 Gene

mRNA expression in normal human tissues from GTEx, Illumina, BioGPS, and CGAP SAGE for RPL7AP38 Gene

NURSA nuclear receptor signaling pathways regulating expression of RPL7AP38 Gene:

RPL7AP38
genes like me logo Genes that share expression patterns with RPL7AP38: view

No data available for mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , mRNA differential expression in normal tissues , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners , mRNA Expression by UniProt/SwissProt , Evidence on tissue expression from TISSUES and Phenotype-based relationships between genes and organs from Gene ORGANizer for RPL7AP38 Gene

Orthologs for RPL7AP38 Gene

Evolution for RPL7AP38 Gene

ENSEMBL:
Gene Tree for RPL7AP38 (if available)
TreeFam:
Gene Tree for RPL7AP38 (if available)

No data available for Orthologs for RPL7AP38 Gene

Paralogs for RPL7AP38 Gene

No data available for Paralogs for RPL7AP38 Gene

Variants for RPL7AP38 Gene

Additional Variant Information for RPL7AP38 Gene

SNPedia medical, phenotypic, and genealogical associations of SNPs for
RPL7AP38

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Sequence variations from dbSNP and Humsavar , Structural Variations from Database of Genomic Variants (DGV) and Variation tolerance for RPL7AP38 Gene

Disorders for RPL7AP38 Gene

No disorders were found for RPL7AP38 Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot , Genatlas and External Links for RPL7AP38 Gene

Publications for RPL7AP38 Gene

  1. Comparative analysis of processed ribosomal protein pseudogenes in four mammalian genomes. (PMID: 19123937) Balasubramanian S … Gerstein M (Genome biology 2009) 2 3 56
  2. Toward a complete human genome sequence. (PMID: 9847074) Sanger Center … Genome Sequencing Center (Genome research 1998) 3 56

Products for RPL7AP38 Gene

Sources for RPL7AP38 Gene