Aliases for RPL7AP21 Gene

Aliases for RPL7AP21 Gene

  • Ribosomal Protein L7a Pseudogene 21 2 3
  • Ribosomal Protein L7a (RPL7A) Pseudogene 5
  • RPL7A_4_120 3
  • AL031736.2 5

External Ids for RPL7AP21 Gene

Previous GeneCards Identifiers for RPL7AP21 Gene

  • GC01U902325
  • GC01M168548

Summaries for RPL7AP21 Gene

GeneCards Summary for RPL7AP21 Gene

RPL7AP21 (Ribosomal Protein L7a Pseudogene 21) is a Pseudogene.

Additional gene information for RPL7AP21 Gene

No data available for Entrez Gene Summary , CIViC Summary , UniProtKB/Swiss-Prot Summary , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , Rfam classification and piRNA Summary for RPL7AP21 Gene

Genomics for RPL7AP21 Gene

GeneHancer (GH) Regulatory Elements Pubs

Promoters and enhancers for RPL7AP21 Gene
GeneHancer (GH) Identifier GH Type GH
Score
GH Sources Gene Association Score Total Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor
Binding Sites
Gene Targets
GH01J169101 Promoter/Enhancer 2.4 EPDnew FANTOM5 Ensembl ENCODE CraniofacialAtlas dbSUPER 5 -528.7 -528739 14 HNRNPL CREB1 GATAD2A CTCF TEAD4 PRDM10 ZNF629 REST TFE3 SOX13 ATP1B1 RN7SL333P METTL18 LINC00970 DPT NME7 CCDC181 RPL7AP21 XCL2 ENSG00000285622
GH01J168583 Enhancer 0.6 Ensembl CraniofacialAtlas 0.7 -3.9 -3919 1.2 ESR1 ZNF24 POLR2A ATP1B1 LOC101928596 RPL7AP21 XCL1 HSALNG0008296 DPT
GH01J168612 Enhancer 1.1 ENCODE CraniofacialAtlas dbSUPER 0.3 -34.4 -34449 2.6 ZNF629 ZIC2 ZSCAN4 PKNOX1 POLR2A PATZ1 ZNF501 ZNF341 ZNF561 ZBTB44 ATP1B1 LOC101928596 DCAF6 HSALNG0008296 RPL7AP21 XCL1 DPT
GH01J168603 Enhancer 0.7 ENCODE 0.4 -24.2 -24225 0.2 CTCF FOXA1 ZNF143 ZIC2 REST RAD21 TRIM22 MTA3 TCF12 SMC3 ATP1B1 LOC101928596 HSALNG0008296 RPL7AP21 XCL1 DPT
GH01J168609 Enhancer 0.8 CraniofacialAtlas dbSUPER 0.3 -30.0 -30000 0.6 ZBTB33 REST POLR2A RAD21 SMARCC1 EGR1 ZSCAN5C NR2C2 SMARCB1 MIER1 LOC101928596 ATP1B1 HSALNG0008296 RPL7AP21 XCL1 DPT
- Elite GeneHancer and/or Elite GeneHancer-gene association Download GeneHancer data from 2017 publication | Request up-to-date GeneHancer data (full dataset)

GeneHancers around RPL7AP21 on the GeneHancer Hub at the UCSC Golden Path

Genomic Locations for RPL7AP21 Gene

Genomic Locations for RPL7AP21 Gene
chr1:168,578,601-168,579,463
(GRCh38/hg38)
Size:
863 bases
Orientation:
Minus strand
chr1:168,547,839-168,548,701
(GRCh37/hg19)
Size:
863 bases
Orientation:
Minus strand

Genomic View for RPL7AP21 Gene

Genes around RPL7AP21 on UCSC Golden Path with GeneCards custom track

Cytogenetic band:
RPL7AP21 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for RPL7AP21 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

RefSeq DNA sequence for RPL7AP21 Gene

Proteins for RPL7AP21 Gene

Post-translational modifications for RPL7AP21 Gene

No Post-translational modifications

No data available for DME Specific Peptides for RPL7AP21 Gene

Domains & Families for RPL7AP21 Gene

No data available for Gene Families , Protein Domains , Suggested Antigen Peptide Sequences , Graphical View of Domain Structure and UniProtKB/Swiss-Prot for RPL7AP21 Gene

Function for RPL7AP21 Gene

Phenotypes From GWAS Catalog for RPL7AP21 Gene

Animal Model Products

CRISPR Products

No data available for Molecular function , Enzyme Numbers (IUBMB) , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for RPL7AP21 Gene

Localization for RPL7AP21 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS , Subcellular locations from the Human Protein Atlas (HPA) and Gene Ontology (GO) - Cellular Components for RPL7AP21 Gene

Pathways & Interactions for RPL7AP21 Gene

PathCards logo

SuperPathways for RPL7AP21 Gene

No Data Available

Gene Ontology (GO) - Biological Process for RPL7AP21 Gene

None

No data available for Pathways by source , Interacting Proteins and SIGNOR curated interactions for RPL7AP21 Gene

Drugs & Compounds for RPL7AP21 Gene

No Compound Related Data Available

Transcripts for RPL7AP21 Gene

mRNA/cDNA for RPL7AP21 Gene

1 Ensembl transcripts including schematic representations, and UCSC links to gene/alias where relevant :

Alternative Splicing Database (ASD) splice patterns (SP) for RPL7AP21 Gene

No ASD Table

Relevant External Links for RPL7AP21 Gene

GeneLoc Exon Structure for
RPL7AP21

Expression for RPL7AP21 Gene

mRNA expression in normal human tissues from GTEx, Illumina, BioGPS, and SAGE for RPL7AP21 Gene

mRNA differential expression in normal tissues according to GTEx for RPL7AP21 Gene

This gene is overexpressed in Whole Blood (x7.7) and Spleen (x7.1).
genes like me logo Genes that share expression patterns with RPL7AP21: view

No data available for mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners , mRNA Expression by UniProt/SwissProt , Evidence on tissue expression from TISSUES and Phenotype-based relationships between genes and organs from Gene ORGANizer for RPL7AP21 Gene

Orthologs for RPL7AP21 Gene

Evolution for RPL7AP21 Gene

ENSEMBL:
Gene Tree for RPL7AP21 (if available)
TreeFam:
Gene Tree for RPL7AP21 (if available)

No data available for Orthologs for RPL7AP21 Gene

Paralogs for RPL7AP21 Gene

No data available for Paralogs for RPL7AP21 Gene

Variants for RPL7AP21 Gene

Additional Variant Information for RPL7AP21 Gene

SNPedia medical, phenotypic, and genealogical associations of SNPs for
RPL7AP21

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Sequence variations, with clinical significance, from ClinVar and Humsavar, with links to dbSNP , Additional dbSNP identifiers (rs#s) , Structural Variations from Database of Genomic Variants (DGV) and Variation tolerance for RPL7AP21 Gene

Disorders for RPL7AP21 Gene

Additional Disease Information for RPL7AP21

Genetic Association Database
(GAD)

No disorders were found for RPL7AP21 Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot and Genatlas for RPL7AP21 Gene

Publications for RPL7AP21 Gene

  1. Comparative analysis of processed ribosomal protein pseudogenes in four mammalian genomes. (PMID: 19123937) Balasubramanian S … Gerstein M (Genome biology 2009) 2 3
  2. Genome-wide association with bone mass and geometry in the Framingham Heart Study. (PMID: 17903296) Kiel DP … Karasik D (BMC medical genetics 2007) 41
  3. Genetic correlates of longevity and selected age-related phenotypes: a genome-wide association study in the Framingham Study. (PMID: 17903295) Lunetta KL … Murabito JM (BMC medical genetics 2007) 41

No data available for Mastermind for RPL7AP21 Gene

Products for RPL7AP21 Gene

Sources for RPL7AP21 Gene