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Aliases for RPL7AP20 Gene

Aliases for RPL7AP20 Gene

  • Ribosomal Protein L7a Pseudogene 20 2 3
  • RPL7A_3_155 3
  • AC244034.1 5

External Ids for RPL7AP20 Gene

Previous GeneCards Identifiers for RPL7AP20 Gene

  • GC01U902362
  • GC01P206703

Summaries for RPL7AP20 Gene

GeneCards Summary for RPL7AP20 Gene

RPL7AP20 (Ribosomal Protein L7a Pseudogene 20) is a Pseudogene.

Additional gene information for RPL7AP20 Gene

No data available for Entrez Gene Summary , CIViC summary , UniProtKB/Swiss-Prot , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , fRNAdb sequence ontologies and piRNA Summary for RPL7AP20 Gene

Genomics for RPL7AP20 Gene

GeneHancer (GH) Regulatory Elements for RPL7AP20 Gene

Promoters and enhancers for RPL7AP20 Gene
GeneHancer (GH) Identifier GH Type GH
Score
GH Sources Gene Association Score Total Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor
Binding Sites
Gene Targets
GH01I206917 Promoter/Enhancer 2.7 EPDnew FANTOM5 Ensembl ENCODE dbSUPER 11.8 +394.2 394178 12 HDGF PKNOX1 SMAD1 ARNT NEUROD1 YBX1 ZNF2 ZBTB7B IRF4 ZNF766 FCMR EIF2D CDCA4P4 MAPKAPK2 ENSG00000271680 CD46 PIGR FCAMR RPL7AP20 IL20
GH01I206046 Promoter/Enhancer 2.1 EPDnew FANTOM5 Ensembl ENCODE dbSUPER 11.8 -478.5 -478506 7.8 HDGF PKNOX1 FOXA2 ARID4B DMAP1 IRF4 ZNF48 ETS1 ZNF207 ZNF143 RHEX ELK4 EIF2D ENSG00000252692 RPL7AP20 CTSE AVPR1B ENSG00000226780 SLC26A9 TMCC2
GH01I205747 Promoter/Enhancer 2.4 EPDnew Ensembl ENCODE 10.2 -779.2 -779178 4.1 CLOCK FEZF1 DMAP1 IRF4 YY1 ZNF213 E2F8 ZNF143 SP3 NFYC NUCKS1 ELK4 EIF2D PM20D1 RAB29 DSTYK LOC100420878 RPL7AP20 ENSG00000201944
GH01I207017 Promoter/Enhancer 2.3 EPDnew FANTOM5 Ensembl ENCODE dbSUPER 10.2 +497.8 497775 18.4 HDGF HNRNPUL1 PKNOX1 CLOCK SMAD1 FOXA2 ARNT ARID4B NEUROD1 SIN3A C1orf116 EIF2D C4BPA CDCA4P4 C4BPB FCAMR PIGR FCMR RPL7AP20 IL20
GH01I206611 Promoter/Enhancer 2.2 EPDnew Ensembl ENCODE 10.1 +83.2 83219 2.2 CLOCK ZFP64 FEZF1 DMAP1 IRF4 YY1 SLC30A9 ZNF213 E2F8 ZNF143 EIF2D ELK4 MAPKAPK2 LOC100420878 RPL7AP20 NUCKS1 RASSF5 PIR41610
- Elite GeneHancer and/or Elite GeneHancer-gene association Download GeneHancer data dump

GeneHancers around RPL7AP20 on UCSC Golden Path with GeneCards custom track

Genomic Locations for RPL7AP20 Gene

Genomic Locations for RPL7AP20 Gene
chr1:206,528,893-206,529,765
(GRCh38/hg38)
Size:
873 bases
Orientation:
Plus strand
chr1:206,702,226-206,703,098
(GRCh37/hg19)

Genomic View for RPL7AP20 Gene

Genes around RPL7AP20 on UCSC Golden Path with GeneCards custom track

Cytogenetic band:
RPL7AP20 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for RPL7AP20 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

RefSeq DNA sequence for RPL7AP20 Gene

Proteins for RPL7AP20 Gene

Post-translational modifications for RPL7AP20 Gene

No Post-translational modifications

No data available for DME Specific Peptides for RPL7AP20 Gene

Domains & Families for RPL7AP20 Gene

Graphical View of Domain Structure for InterPro Entry

No data available for Gene Families , Protein Domains , Suggested Antigen Peptide Sequences and UniProtKB/Swiss-Prot for RPL7AP20 Gene

Function for RPL7AP20 Gene

Phenotypes From GWAS Catalog for RPL7AP20 Gene

Animal Model Products

Clone Products

No data available for Molecular function , Enzyme Numbers (IUBMB) , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for RPL7AP20 Gene

Localization for RPL7AP20 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS , Subcellular locations from the Human Protein Atlas (HPA) and Gene Ontology (GO) - Cellular Components for RPL7AP20 Gene

Pathways & Interactions for RPL7AP20 Gene

SuperPathways for RPL7AP20 Gene

No Data Available

Interacting Proteins for RPL7AP20 Gene

Gene Ontology (GO) - Biological Process for RPL7AP20 Gene

None

No data available for Pathways by source and SIGNOR curated interactions for RPL7AP20 Gene

Drugs & Compounds for RPL7AP20 Gene

No Compound Related Data Available

Transcripts for RPL7AP20 Gene

mRNA/cDNA for RPL7AP20 Gene

(1) Ensembl transcripts including schematic representations, and UCSC links where relevant :

Clone Products

Alternative Splicing Database (ASD) splice patterns (SP) for RPL7AP20 Gene

No ASD Table

Relevant External Links for RPL7AP20 Gene

GeneLoc Exon Structure for
RPL7AP20
ECgene alternative splicing isoforms for
RPL7AP20

Expression for RPL7AP20 Gene

mRNA expression in normal human tissues from GTEx, Illumina, BioGPS, and CGAP SAGE for RPL7AP20 Gene

NURSA nuclear receptor signaling pathways regulating expression of RPL7AP20 Gene:

RPL7AP20
genes like me logo Genes that share expression patterns with RPL7AP20: view

No data available for mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , mRNA differential expression in normal tissues , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners , mRNA Expression by UniProt/SwissProt , Evidence on tissue expression from TISSUES and Phenotype-based relationships between genes and organs from Gene ORGANizer for RPL7AP20 Gene

Orthologs for RPL7AP20 Gene

Evolution for RPL7AP20 Gene

ENSEMBL:
Gene Tree for RPL7AP20 (if available)
TreeFam:
Gene Tree for RPL7AP20 (if available)

No data available for Orthologs for RPL7AP20 Gene

Paralogs for RPL7AP20 Gene

No data available for Paralogs for RPL7AP20 Gene

Variants for RPL7AP20 Gene

Additional Variant Information for RPL7AP20 Gene

SNPedia medical, phenotypic, and genealogical associations of SNPs for
RPL7AP20

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Sequence variations from dbSNP and Humsavar , Structural Variations from Database of Genomic Variants (DGV) and Variation tolerance for RPL7AP20 Gene

Disorders for RPL7AP20 Gene

No disorders were found for RPL7AP20 Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot , Genatlas and External Links for RPL7AP20 Gene

Publications for RPL7AP20 Gene

  1. Comparative analysis of processed ribosomal protein pseudogenes in four mammalian genomes. (PMID: 19123937) Balasubramanian S … Gerstein M (Genome biology 2009) 2 3 58

Products for RPL7AP20 Gene

Sources for RPL7AP20 Gene

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