Free for academic non-profit institutions. Other users need a Commercial license

Aliases for RPL7AP18 Gene

Aliases for RPL7AP18 Gene

  • Ribosomal Protein L7a Pseudogene 18 2 3
  • AL034417.1 5
  • RPL7A_1_5 3

External Ids for RPL7AP18 Gene

Previous GeneCards Identifiers for RPL7AP18 Gene

  • GC01M008039

Summaries for RPL7AP18 Gene

GeneCards Summary for RPL7AP18 Gene

RPL7AP18 (Ribosomal Protein L7a Pseudogene 18) is a Pseudogene.

Additional gene information for RPL7AP18 Gene

No data available for Entrez Gene Summary , CIViC summary , UniProtKB/Swiss-Prot , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , fRNAdb sequence ontologies and piRNA Summary for RPL7AP18 Gene

Genomics for RPL7AP18 Gene

GeneHancer (GH) Regulatory Elements for RPL7AP18 Gene

Promoters and enhancers for RPL7AP18 Gene
GeneHancer (GH) Identifier GH Type GH
Score
GH Sources Gene Association Score Total Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor
Binding Sites
Gene Targets
GH01I008058 Enhancer 1.5 FANTOM5 Ensembl ENCODE dbSUPER 0.8 -2.3 -2339 5.1 ELF3 FOXA2 INSM2 NEUROD1 RAD21 RARA GTF3C2 POLR3A FOS RCOR1 ENSG00000238290 PARK7 ERRFI1 RPL7AP18 LOC100129776
GH01I008055 Enhancer 0.9 ENCODE dbSUPER 0.8 +2.3 2298 1.1 JUN CEBPG FOSL1 ZNF316 NFE2 FOSL2 FOS MAFK TCF7L2 CEBPB ENSG00000238290 RPL7AP18
GH01I008069 Enhancer 1.5 VISTA Ensembl ENCODE dbSUPER 0.4 -12.4 -12381 2.5 BCOR TFAP4 PKNOX1 ZNF146 CTBP1 GATA3 POLR2A GATAD2A SMARCE1 DPF2 ENSG00000238290 PARK7 RPL7AP18 LOC100129776
GH01I008045 Enhancer 1.4 FANTOM5 Ensembl ENCODE dbSUPER 0.4 +11.3 11256 3.8 MZF1 SIN3A FEZF1 RFX5 SCRT2 FOS CEBPB REST ZEB2 SP1 ENSG00000238290 PARK7 RPL7AP18 GC01P008012
GH01I008039 Enhancer 1.3 Ensembl ENCODE dbSUPER 0.4 +17.8 17781 1.7 PKNOX1 FOXA2 ARID4B SIN3A YY1 SLC30A9 ATF7 FOS NFYC PPARG SLC45A1 PARK7 ENSG00000238290 RPL7AP18 GC01P008012
- Elite GeneHancer and/or Elite GeneHancer-gene association Download GeneHancer data dump

GeneHancers around RPL7AP18 on UCSC Golden Path with GeneCards custom track

Genomic Locations for RPL7AP18 Gene

Genomic Locations for RPL7AP18 Gene
chr1:8,057,181-8,058,487
(GRCh38/hg38)
Size:
1,307 bases
Orientation:
Minus strand
chr1:8,117,241-8,118,547
(GRCh37/hg19)

Genomic View for RPL7AP18 Gene

Genes around RPL7AP18 on UCSC Golden Path with GeneCards custom track

Cytogenetic band:
RPL7AP18 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for RPL7AP18 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

RefSeq DNA sequence for RPL7AP18 Gene

Proteins for RPL7AP18 Gene

Post-translational modifications for RPL7AP18 Gene

No Post-translational modifications

No data available for DME Specific Peptides for RPL7AP18 Gene

Domains & Families for RPL7AP18 Gene

Graphical View of Domain Structure for InterPro Entry

No data available for Gene Families , Protein Domains , Suggested Antigen Peptide Sequences and UniProtKB/Swiss-Prot for RPL7AP18 Gene

Function for RPL7AP18 Gene

Phenotypes From GWAS Catalog for RPL7AP18 Gene

Animal Model Products

Clone Products

No data available for Molecular function , Enzyme Numbers (IUBMB) , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for RPL7AP18 Gene

Localization for RPL7AP18 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS , Subcellular locations from the Human Protein Atlas (HPA) and Gene Ontology (GO) - Cellular Components for RPL7AP18 Gene

Pathways & Interactions for RPL7AP18 Gene

SuperPathways for RPL7AP18 Gene

No Data Available

Interacting Proteins for RPL7AP18 Gene

Gene Ontology (GO) - Biological Process for RPL7AP18 Gene

None

No data available for Pathways by source and SIGNOR curated interactions for RPL7AP18 Gene

Drugs & Compounds for RPL7AP18 Gene

No Compound Related Data Available

Transcripts for RPL7AP18 Gene

mRNA/cDNA for RPL7AP18 Gene

(1) Ensembl transcripts including schematic representations, and UCSC links where relevant :

Clone Products

Alternative Splicing Database (ASD) splice patterns (SP) for RPL7AP18 Gene

No ASD Table

Relevant External Links for RPL7AP18 Gene

GeneLoc Exon Structure for
RPL7AP18
ECgene alternative splicing isoforms for
RPL7AP18

Expression for RPL7AP18 Gene

mRNA expression in normal human tissues from GTEx, Illumina, BioGPS, and CGAP SAGE for RPL7AP18 Gene

NURSA nuclear receptor signaling pathways regulating expression of RPL7AP18 Gene:

RPL7AP18
genes like me logo Genes that share expression patterns with RPL7AP18: view

No data available for mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , mRNA differential expression in normal tissues , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners , mRNA Expression by UniProt/SwissProt , Evidence on tissue expression from TISSUES and Phenotype-based relationships between genes and organs from Gene ORGANizer for RPL7AP18 Gene

Orthologs for RPL7AP18 Gene

Evolution for RPL7AP18 Gene

ENSEMBL:
Gene Tree for RPL7AP18 (if available)
TreeFam:
Gene Tree for RPL7AP18 (if available)

No data available for Orthologs for RPL7AP18 Gene

Paralogs for RPL7AP18 Gene

No data available for Paralogs for RPL7AP18 Gene

Variants for RPL7AP18 Gene

Additional Variant Information for RPL7AP18 Gene

SNPedia medical, phenotypic, and genealogical associations of SNPs for
RPL7AP18

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Sequence variations from dbSNP and Humsavar , Structural Variations from Database of Genomic Variants (DGV) and Variation tolerance for RPL7AP18 Gene

Disorders for RPL7AP18 Gene

Additional Disease Information for RPL7AP18

Genetic Association Database
(GAD)

No disorders were found for RPL7AP18 Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot and Genatlas for RPL7AP18 Gene

Publications for RPL7AP18 Gene

  1. Comparative analysis of processed ribosomal protein pseudogenes in four mammalian genomes. (PMID: 19123937) Balasubramanian S … Gerstein M (Genome biology 2009) 2 3 58
  2. A genome-wide association study for blood lipid phenotypes in the Framingham Heart Study. (PMID: 17903299) Kathiresan S … Cupples LA (BMC medical genetics 2007) 44 58

Products for RPL7AP18 Gene

Sources for RPL7AP18 Gene

Content
Loading form....