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Aliases for RPL7AP16 Gene

Aliases for RPL7AP16 Gene

  • Ribosomal Protein L7a Pseudogene 16 2 3
  • RPL7A_2_43 3
  • AL604028.2 5

External Ids for RPL7AP16 Gene

Previous GeneCards Identifiers for RPL7AP16 Gene

  • GC01U902273
  • GC01M046117

Summaries for RPL7AP16 Gene

GeneCards Summary for RPL7AP16 Gene

RPL7AP16 (Ribosomal Protein L7a Pseudogene 16) is a Pseudogene.

Additional gene information for RPL7AP16 Gene

No data available for Entrez Gene Summary , CIViC summary , UniProtKB/Swiss-Prot , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , fRNAdb sequence ontologies and piRNA Summary for RPL7AP16 Gene

Genomics for RPL7AP16 Gene

GeneHancer (GH) Regulatory Elements for RPL7AP16 Gene

Promoters and enhancers for RPL7AP16 Gene
GeneHancer (GH) Identifier GH Type GH
Score
GH Sources Gene Association Score Total Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor
Binding Sites
Gene Targets
GH01J044729 Promoter/Enhancer 1.8 Ensembl ENCODE dbSUPER 96.3 +920.5 920476 2.8 CLOCK FEZF1 YBX1 IRF4 YY1 E2F8 ZNF143 SP3 NFYC MEF2D GC01M044732 RNU5D-1 GPBP1L1 TOE1 RPL7AP16 RPS8 HECTD3 RPS15AP10 NASP MUTYH
GH01J046129 Promoter/Enhancer 2.1 EPDnew Ensembl ENCODE 63.2 -481.1 -481103 6.3 CLOCK MLX ZFP64 FEZF1 DMAP1 IRF4 YY1 SLC30A9 ZNF213 E2F8 PIK3R3 LOC101929626 TOE1 GPBP1L1 LRRC41 RPL7AP16 EFCAB14-AS1 RPS15AP10 TMEM69 MOB3C
GH01J044774 Promoter/Enhancer 2.3 EPDnew Ensembl ENCODE dbSUPER 55.7 +875.6 875632 3.7 ZFP64 DMAP1 YBX1 IRF4 YY1 ZNF213 E2F8 ZNF143 MCM3 SP3 RPS8 GC01P044811 SNORD46 SNORD55 SNORD38A GC01P044837 GC01P044835 GC01P044834 GC01P044833 GC01P044823
GH01J045582 Promoter/Enhancer 2.1 EPDnew Ensembl ENCODE 55.7 +67.0 67001 5.4 HDGF HNRNPUL1 PKNOX1 SMAD1 ARNT ARID4B SIN3A DMAP1 ZNF2 YY1 NASP GC01M045583 TOE1 GPBP1L1 LRRC41 MUTYH RPL7AP16 CCDC163 HECTD3 RPS8
GH01J044720 Enhancer 1.5 Ensembl ENCODE dbSUPER 77.4 +929.0 929046 4.8 MLX ZFP64 FEZF1 YBX1 IRF4 YY1 E2F8 ZNF143 SP3 NFYC GC01M044722 LOC105378690 RNU5F-1 TOE1 GPBP1L1 RPL7AP16 MUTYH HECTD3 RPS8 DMAP1
- Elite GeneHancer and/or Elite GeneHancer-gene association Download GeneHancer data dump

GeneHancers around RPL7AP16 on UCSC Golden Path with GeneCards custom track

Genomic Locations for RPL7AP16 Gene

Genomic Locations for RPL7AP16 Gene
chr1:45,650,978-45,651,850
(GRCh38/hg38)
Size:
873 bases
Orientation:
Minus strand
chr1:46,116,650-46,117,522
(GRCh37/hg19)

Genomic View for RPL7AP16 Gene

Genes around RPL7AP16 on UCSC Golden Path with GeneCards custom track

Cytogenetic band:
RPL7AP16 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for RPL7AP16 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

RefSeq DNA sequence for RPL7AP16 Gene

Function for RPL7AP16 Gene

Phenotypes From GWAS Catalog for RPL7AP16 Gene

Animal Model Products

Clone Products

No data available for Molecular function , Enzyme Numbers (IUBMB) , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for RPL7AP16 Gene

Localization for RPL7AP16 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS , Subcellular locations from the Human Protein Atlas (HPA) and Gene Ontology (GO) - Cellular Components for RPL7AP16 Gene

Pathways & Interactions for RPL7AP16 Gene

SuperPathways for RPL7AP16 Gene

No Data Available

Interacting Proteins for RPL7AP16 Gene

Gene Ontology (GO) - Biological Process for RPL7AP16 Gene

None

No data available for Pathways by source and SIGNOR curated interactions for RPL7AP16 Gene

Drugs & Compounds for RPL7AP16 Gene

No Compound Related Data Available

Transcripts for RPL7AP16 Gene

mRNA/cDNA for RPL7AP16 Gene

(1) Ensembl transcripts including schematic representations, and UCSC links where relevant :

Clone Products

Alternative Splicing Database (ASD) splice patterns (SP) for RPL7AP16 Gene

No ASD Table

Relevant External Links for RPL7AP16 Gene

GeneLoc Exon Structure for
RPL7AP16
ECgene alternative splicing isoforms for
RPL7AP16

Expression for RPL7AP16 Gene

mRNA expression in normal human tissues from GTEx, Illumina, BioGPS, and CGAP SAGE for RPL7AP16 Gene

NURSA nuclear receptor signaling pathways regulating expression of RPL7AP16 Gene:

RPL7AP16
genes like me logo Genes that share expression patterns with RPL7AP16: view

No data available for mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , mRNA differential expression in normal tissues , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners , mRNA Expression by UniProt/SwissProt , Evidence on tissue expression from TISSUES and Phenotype-based relationships between genes and organs from Gene ORGANizer for RPL7AP16 Gene

Orthologs for RPL7AP16 Gene

Evolution for RPL7AP16 Gene

ENSEMBL:
Gene Tree for RPL7AP16 (if available)
TreeFam:
Gene Tree for RPL7AP16 (if available)

No data available for Orthologs for RPL7AP16 Gene

Paralogs for RPL7AP16 Gene

No data available for Paralogs for RPL7AP16 Gene

Variants for RPL7AP16 Gene

Additional Variant Information for RPL7AP16 Gene

SNPedia medical, phenotypic, and genealogical associations of SNPs for
RPL7AP16

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Sequence variations from dbSNP and Humsavar , Structural Variations from Database of Genomic Variants (DGV) and Variation tolerance for RPL7AP16 Gene

Disorders for RPL7AP16 Gene

No disorders were found for RPL7AP16 Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot , Genatlas and External Links for RPL7AP16 Gene

Publications for RPL7AP16 Gene

  1. Comparative analysis of processed ribosomal protein pseudogenes in four mammalian genomes. (PMID: 19123937) Balasubramanian S … Gerstein M (Genome biology 2009) 2 3 58

Products for RPL7AP16 Gene

Sources for RPL7AP16 Gene

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