Aliases for RPL6P3 Gene

Aliases for RPL6P3 Gene

  • Ribosomal Protein L6 Pseudogene 3 2 3
  • RPL6_2_187 3

External Ids for RPL6P3 Gene

Previous GeneCards Identifiers for RPL6P3 Gene

  • GC01U902275
  • GC01P241996

Summaries for RPL6P3 Gene

GeneCards Summary for RPL6P3 Gene

RPL6P3 (Ribosomal Protein L6 Pseudogene 3) is a Pseudogene.

Additional gene information for RPL6P3 Gene

No data available for Entrez Gene Summary , CIViC Summary , UniProtKB/Swiss-Prot Summary , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , Rfam classification and piRNA Summary for RPL6P3 Gene

Genomics for RPL6P3 Gene

GeneHancer (GH) Regulatory Elements for RPL6P3 Gene

Promoters and enhancers for RPL6P3 Gene
GeneHancer (GH) Identifier GH Type GH
Score
GH Sources Gene Association Score Total Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor
Binding Sites
Gene Targets
GH01J241828 Enhancer 0.6 Ensembl 0.7 -2.6 -2609 1.4 EP300 FOXA2 ZNF184 CEBPB ZNF335 TAL1 MITF MAFF SMARCE1 ATF3 WDR64 CHML RPL6P3 LOC105373231
GH01J241816 Enhancer 0.9 Ensembl ENCODE 0.4 -14.1 -14108 2 FOS CUX1 CTBP1 CEBPB NBN SPI1 FOXA1 IKZF1 HDAC2 DPF2 LOC105373231 CHML RPL6P3
GH01J241824 Enhancer 0.8 ENCODE 0.4 -7.8 -7775 0.2 ZBTB40 GTF2E2 SIX5 ZBTB11 TAF9B NFRKB PBX2 GABPA POLR2A TBL1XR1 LOC105373231 RPL6P3
GH01J241820 Enhancer 0.5 Ensembl 0.4 -10.4 -10409 1.8 FOS FOSL2 KLF13 SPI1 JUND EP300 ZBTB21 BCL3 FOXA1 CEBPB LOC105373231 RPL6P3
GH01J241825 Enhancer 0.4 Ensembl 0.4 -6.1 -6108 0.4 IRF1 IRF2 STAT2 ZNF766 CHML LOC105373231 RPL6P3
- Elite GeneHancer and/or Elite GeneHancer-gene association Download GeneHancer data from 2017 publication | Request up-to-date GeneHancer data (full dataset)

GeneHancers around RPL6P3 on UCSC Golden Path with GeneCards custom track

Genomic Locations for RPL6P3 Gene

Genomic Locations for RPL6P3 Gene
chr1:241,831,909-241,832,827
(GRCh38/hg38)
Size:
919 bases
Orientation:
Plus strand
chr1:241,995,211-241,996,129
(GRCh37/hg19)
Size:
919 bases
Orientation:
Plus strand

Genomic View for RPL6P3 Gene

Genes around RPL6P3 on UCSC Golden Path with GeneCards custom track

Cytogenetic band:
RPL6P3 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for RPL6P3 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

RefSeq DNA sequence for RPL6P3 Gene

Proteins for RPL6P3 Gene

Post-translational modifications for RPL6P3 Gene

No Post-translational modifications

No data available for DME Specific Peptides for RPL6P3 Gene

Domains & Families for RPL6P3 Gene

No data available for Gene Families , Protein Domains , Suggested Antigen Peptide Sequences , Graphical View of Domain Structure and UniProtKB/Swiss-Prot for RPL6P3 Gene

Function for RPL6P3 Gene

Animal Model Products

CRISPR Products

No data available for Molecular function , Enzyme Numbers (IUBMB) , Phenotypes From GWAS Catalog , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for RPL6P3 Gene

Localization for RPL6P3 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS , Subcellular locations from the Human Protein Atlas (HPA) and Gene Ontology (GO) - Cellular Components for RPL6P3 Gene

Pathways & Interactions for RPL6P3 Gene

PathCards logo

SuperPathways for RPL6P3 Gene

No Data Available
;

Gene Ontology (GO) - Biological Process for RPL6P3 Gene

None

No data available for Pathways by source , Interacting Proteins and SIGNOR curated interactions for RPL6P3 Gene

Drugs & Compounds for RPL6P3 Gene

No Compound Related Data Available

Transcripts for RPL6P3 Gene

Alternative Splicing Database (ASD) splice patterns (SP) for RPL6P3 Gene

No ASD Table

Relevant External Links for RPL6P3 Gene

GeneLoc Exon Structure for
RPL6P3

No data available for mRNA/cDNA for RPL6P3 Gene

Expression for RPL6P3 Gene

mRNA expression in normal human tissues from GTEx, Illumina, BioGPS, and SAGE for RPL6P3 Gene

genes like me logo Genes that share expression patterns with RPL6P3: view

No data available for mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , mRNA differential expression in normal tissues , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners , mRNA Expression by UniProt/SwissProt , Evidence on tissue expression from TISSUES and Phenotype-based relationships between genes and organs from Gene ORGANizer for RPL6P3 Gene

Orthologs for RPL6P3 Gene

No data available for Orthologs and Evolution for RPL6P3 Gene

Paralogs for RPL6P3 Gene

No data available for Paralogs for RPL6P3 Gene

Variants for RPL6P3 Gene

Additional Variant Information for RPL6P3 Gene

SNPedia medical, phenotypic, and genealogical associations of SNPs for
RPL6P3

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Sequence variations, with clinical significance, from ClinVar and Humsavar, with links to dbSNP , Additional dbSNP identifiers (rs#s) , Structural Variations from Database of Genomic Variants (DGV) and Variation tolerance for RPL6P3 Gene

Disorders for RPL6P3 Gene

No disorders were found for RPL6P3 Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot , Genatlas and External Links for RPL6P3 Gene

Publications for RPL6P3 Gene

  1. Comparative analysis of processed ribosomal protein pseudogenes in four mammalian genomes. (PMID: 19123937) Balasubramanian S … Gerstein M (Genome biology 2009) 2 3 54

Products for RPL6P3 Gene

Sources for RPL6P3 Gene