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Aliases for RPL6P27 Gene

Aliases for RPL6P27 Gene

  • Ribosomal Protein L6 Pseudogene 27 2 3
  • RPL6_10_1582 3

External Ids for RPL6P27 Gene

Summaries for RPL6P27 Gene

GeneCards Summary for RPL6P27 Gene

RPL6P27 (Ribosomal Protein L6 Pseudogene 27) is a Pseudogene.

Additional gene information for RPL6P27 Gene

No data available for Entrez Gene Summary , CIViC summary , UniProtKB/Swiss-Prot , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , fRNAdb sequence ontologies and piRNA Summary for RPL6P27 Gene

Genomics for RPL6P27 Gene

GeneHancer (GH) Regulatory Elements for RPL6P27 Gene

Promoters and enhancers for RPL6P27 Gene
GeneHancer (GH) Identifier GH Type GH
Score
GH Sources Gene Association Score Total Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor
Binding Sites
Gene Targets
GH18I006462 Enhancer 0.2 Ensembl 550.8 +0.1 128 0.2 RPL6P27 GC18P006454
GH18I006682 Enhancer 0.9 ENCODE 12.2 -220.1 -220121 1.3 PKNOX1 SMAD1 ATF1 ARNT YY1 ZNF280A TCF12 POLR2B ZNF766 GATA2 LOC101927168 RPL6P27 PIR51107 ENSG00000279479
GH18I006482 Enhancer 1 Ensembl ENCODE 0.4 -19.8 -19783 0.4 ELF3 INSM2 KLF17 ZNF2 THRB ZNF48 RAD21 RARA ZNF335 GLIS2 ENSG00000266065 RPL6P27
GH18I006488 Enhancer 0.4 ENCODE 0.3 -25.1 -25138 0.2 SP1 USF1 ENSG00000266065 RPL6P27
GH18I006486 Enhancer 0.3 ENCODE 0.3 -24.1 -24102 1 EBF1 ENSG00000266065 RPL6P27
- Elite GeneHancer and/or Elite GeneHancer-gene association Download GeneHancer data dump

GeneHancers around RPL6P27 on UCSC Golden Path with GeneCards custom track

Genomic Locations for RPL6P27 Gene

Genomic Locations for RPL6P27 Gene
chr18:6,462,092-6,463,029
(GRCh38/hg38)
Size:
938 bases
Orientation:
Minus strand
chr18:6,462,091-6,463,028
(GRCh37/hg19)

Genomic View for RPL6P27 Gene

Genes around RPL6P27 on UCSC Golden Path with GeneCards custom track

Cytogenetic band:
RPL6P27 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for RPL6P27 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

RefSeq DNA sequence for RPL6P27 Gene

Proteins for RPL6P27 Gene

Post-translational modifications for RPL6P27 Gene

No Post-translational modifications

No data available for DME Specific Peptides for RPL6P27 Gene

Domains & Families for RPL6P27 Gene

Graphical View of Domain Structure for InterPro Entry

No data available for Gene Families , Protein Domains , Suggested Antigen Peptide Sequences and UniProtKB/Swiss-Prot for RPL6P27 Gene

Function for RPL6P27 Gene

Phenotypes From GWAS Catalog for RPL6P27 Gene

Animal Model Products

Clone Products

No data available for Molecular function , Enzyme Numbers (IUBMB) , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for RPL6P27 Gene

Localization for RPL6P27 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS , Subcellular locations from the Human Protein Atlas (HPA) and Gene Ontology (GO) - Cellular Components for RPL6P27 Gene

Pathways & Interactions for RPL6P27 Gene

SuperPathways for RPL6P27 Gene

No Data Available

Interacting Proteins for RPL6P27 Gene

Gene Ontology (GO) - Biological Process for RPL6P27 Gene

None

No data available for Pathways by source and SIGNOR curated interactions for RPL6P27 Gene

Drugs & Compounds for RPL6P27 Gene

No Compound Related Data Available

Transcripts for RPL6P27 Gene

mRNA/cDNA for RPL6P27 Gene

(2) Ensembl transcripts including schematic representations, and UCSC links where relevant :

Clone Products

Alternative Splicing Database (ASD) splice patterns (SP) for RPL6P27 Gene

No ASD Table

Relevant External Links for RPL6P27 Gene

GeneLoc Exon Structure for
RPL6P27
ECgene alternative splicing isoforms for
RPL6P27

Expression for RPL6P27 Gene

mRNA expression in normal human tissues from GTEx, Illumina, BioGPS, and CGAP SAGE for RPL6P27 Gene

NURSA nuclear receptor signaling pathways regulating expression of RPL6P27 Gene:

RPL6P27
genes like me logo Genes that share expression patterns with RPL6P27: view

No data available for mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , mRNA differential expression in normal tissues , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners , mRNA Expression by UniProt/SwissProt , Evidence on tissue expression from TISSUES and Phenotype-based relationships between genes and organs from Gene ORGANizer for RPL6P27 Gene

Orthologs for RPL6P27 Gene

Evolution for RPL6P27 Gene

ENSEMBL:
Gene Tree for RPL6P27 (if available)
TreeFam:
Gene Tree for RPL6P27 (if available)

No data available for Orthologs for RPL6P27 Gene

Paralogs for RPL6P27 Gene

No data available for Paralogs for RPL6P27 Gene

Variants for RPL6P27 Gene

Additional Variant Information for RPL6P27 Gene

SNPedia medical, phenotypic, and genealogical associations of SNPs for
RPL6P27

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Sequence variations from dbSNP and Humsavar , Structural Variations from Database of Genomic Variants (DGV) and Variation tolerance for RPL6P27 Gene

Disorders for RPL6P27 Gene

Additional Disease Information for RPL6P27

No disorders were found for RPL6P27 Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot and Genatlas for RPL6P27 Gene

Publications for RPL6P27 Gene

  1. Comparative analysis of processed ribosomal protein pseudogenes in four mammalian genomes. (PMID: 19123937) Balasubramanian S … Gerstein M (Genome biology 2009) 2 3 58
  2. Novel associations for hypothyroidism include known autoimmune risk loci. (PMID: 22493691) Eriksson N … Do CB (PloS one 2012) 44 58
  3. Complete sequencing and characterization of 21,243 full-length human cDNAs. (PMID: 14702039) Ota T … Sugano S (Nature genetics 2004) 3 58

Products for RPL6P27 Gene

Sources for RPL6P27 Gene

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